Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cox11

Gene Name Gene ID Reads Annotation
cox11 ENSDARG00000061004, ENSDARG00000115002 423 cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]










Genes with expression patterns similar to cox11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cox11 ENSDARG00000061004, ENSDARG00000115002 423 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
2. cacng6a ENSDARG00000036457 344 2.48 - 0.958 - - - 0.768 - 0.754 - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
3. phyhiplb ENSDARG00000070498 348 2.394 - 0.930 - - - 0.739 0.725 - - phytanoyl-CoA 2-hydroxylase interacting protein-like b [Source:ZFIN;Acc:ZDB-GENE-040927-27]
4. CYSTM1 CYSTM1 176 1.814 - 0.927 - - - - - 0.887 -
5. BX005085.1 ENSDARG00000089947 230 1.781 - 0.938 - - - - - 0.843 -
6. stx5a ENSDARG00000025033, ENSDARG00000112598 380 1.712 - 0.893 - - - - - 0.819 - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
7. adar ENSDARG00000012389 520 1.712 - - - - - - 0.831 0.881 - adenosine deaminase, RNA-specific [Source:ZFIN;Acc:ZDB-GENE-000616-5]
8. gpam ENSDARG00000074169 488 1.703 - 0.969 - - - 0.734 - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-101026-1]
9. ano1 ENSDARG00000102335 445 1.702 - 0.861 - 0.841 - - - - - anoctamin 1, calcium activated chloride channel [Source:ZFIN;Acc:ZDB-GENE-121127-3]
10. C21HXorf40A C21HXorf40A 216 1.699 - - - 0.815 - - - 0.884 -
11. prkra ENSDARG00000076718 606 1.688 - 0.893 - - - 0.795 - - - protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
12. CR376783.1 ENSDARG00000074235 259 1.676 0.757 0.919 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
13. C12H10orf2 C12H10orf2 245 1.671 - 0.928 - - - - 0.743 - -
14. syncripl ENSDARG00000026723 3889 1.667 - 0.808 - - - - 0.859 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
15. RNF130 ENSDARG00000089767 559 1.666 - 0.964 - 0.702 - - - - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
16. GEMIN7 ENSDARG00000041011 529 1.656 - 0.893 - - - 0.763 - - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
17. zgc:113385 zgc:113385 297 1.653 - 0.890 - - - - - 0.763 -
18. pnpla2 ENSDARG00000089390 129 1.646 - 0.906 - 0.740 - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
19. slc25a11 ENSDARG00000035741 3377 1.642 - 0.910 - - - - 0.732 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
20. pdf ENSDARG00000013950 293 1.639 - 0.921 - - - - - 0.718 - peptide deformylase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050913-42]
21. lrrc6 ENSDARG00000053318 146 1.623 - 0.917 - - - - 0.706 - - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
22. zfr2 ENSDARG00000071683 780 1.622 - 0.874 - - - - 0.748 - - zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
23. sdf2 ENSDARG00000024026 805 1.61 - 0.892 - - - - - 0.718 - stromal cell-derived factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8823]
24. ankrd28b ENSDARG00000009023 960 1.606 - 0.884 - - - - 0.722 - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
25. fancd2 ENSDARG00000053574 247 1.6 - 0.877 - 0.723 - - - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
26. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 1.599 - 0.876 - - - - 0.723 - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
27. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.599 - 0.881 - - - - - 0.718 - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
28. BX005368.2 BX005368.2 702 1.592 - - - - - - 0.717 0.875 -
29. ubald1b ENSDARG00000020976 1162 1.587 - 0.744 - - - - - 0.843 - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
30. FAIM2 FAIM2 43 1.584 - - - - - 0.707 - 0.877 -
31. ftr64 ENSDARG00000101514 33 1.579 - - - 0.822 - 0.757 - - - finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
32. prkcsh ENSDARG00000004470 1424 1.578 - 0.784 - - - - 0.794 - - protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
33. ppp2r2ba 321 1.574 - - - 0.701 - - - 0.873 - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
34. pex16 ENSDARG00000058202 486 1.573 - 0.829 - - - - 0.744 - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
35. hnrnpa1 hnrnpa1 1302 1.57 - 0.852 - - - - 0.718 - -
36. zswim5 ENSDARG00000055900 4243 1.567 - 0.778 - - - - 0.789 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
37. cdc37l1 ENSDARG00000044265 360 1.564 - - - 0.712 - - - 0.852 - cell division cycle 37-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8865]
38. dhx37 ENSDARG00000062612 488 1.562 - - - - - 0.793 0.769 - - DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Source:ZFIN;Acc:ZDB-GENE-030131-4505]
39. stk25b ENSDARG00000039022 268 1.559 - - - 0.804 - - 0.755 - - serine/threonine kinase 25b [Source:ZFIN;Acc:ZDB-GENE-040426-2537]
40. PAOX PAOX 251 1.55 - - - 0.801 - - 0.749 - -
41. ipo4 ENSDARG00000041493 1578 1.543 - - - - - 0.770 0.773 - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
42. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 1.543 - 0.841 - - - - 0.702 - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
43. si:ch211-278j3.3 ENSDARG00000020284 478 1.541 - - - 0.809 - - - 0.732 - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
44. CABZ01074309.1 CABZ01074309.1 121 1.533 - - - 0.796 - 0.737 - - -
45. snx15 ENSDARG00000020397, ENSDARG00000110059 491 1.527 - 0.793 - - - - 0.734 - - sorting nexin 15 [Source:ZFIN;Acc:ZDB-GENE-040426-1377]
46. pik3ip1 ENSDARG00000003281 339 1.526 - - - 0.804 - - 0.722 - - phosphoinositide-3-kinase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-031030-14]
47. plcd3a ENSDARG00000052957 467 1.52 - - - - - - 0.771 0.749 - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
48. tbl3 ENSDARG00000052344 1530 1.509 0.722 - - - - - 0.787 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
49. scinla ENSDARG00000102415, ENSDARG00000117110 1996 1.507 - 0.798 - - - - - 0.709 - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
50. ATG4D ATG4D 648 1.506 - 0.796 - 0.710 - - - - -
51. phpt1 ENSDARG00000045567 211 1.5 - - - 0.798 - 0.702 - - - phosphohistidine phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-85]
52. BX649453.2 BX649453.2 174 1.496 - - - 0.759 - - 0.737 - -
53. rbm27 ENSDARG00000060521 185 1.491 - - - - - 0.749 0.742 - - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
54. mak16 ENSDARG00000003527 519 1.488 - - - - - - 0.748 0.740 - MAK16 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-35]
55. smfn ENSDARG00000009806 1280 1.482 - 0.769 - - - - 0.713 - - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
56. gstm gstm 4064 1.481 0.702 - - - - - 0.779 - -
57. crsp7 ENSDARG00000105102 1169 1.471 - - - - - - 0.722 0.749 - cofactor required for Sp1 transcriptional activation, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2005]
58. RPAP3 ENSDARG00000087962 946 1.454 - - - - - - 0.745 0.709 - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
59. wdr3 ENSDARG00000011079 1403 1.436 - - - - - - 0.719 0.717 - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
60. txn2 ENSDARG00000034777 4071 1.433 0.725 - - - - - 0.708 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
61. ube2d2l ENSDARG00000099749 1462 1.42 - 0.709 - - - - 0.711 - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
62. NUDT8 ENSDARG00000007722 329 0.969 - 0.969 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
63. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.962 - 0.962 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
64. rab33ba ENSDARG00000052290 914 0.956 - 0.956 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
65. foxn4 ENSDARG00000010591 2332 0.952 - 0.952 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
66. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.951 - 0.951 - - - - - - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
67. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.947 - 0.947 - - - - - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
68. RBMS1 RBMS1 258 0.947 - 0.947 - - - - - - -
69. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.946 - 0.946 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
70. wdr18 ENSDARG00000041113 810 0.946 - 0.946 - - - - - - - WD repeat domain 18 [Source:ZFIN;Acc:ZDB-GENE-040905-4]
71. ckap5 ENSDARG00000102674 5068 0.945 - 0.945 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
72. UBASH3B UBASH3B 292 0.943 - 0.943 - - - - - - -
73. TEAD1 TEAD1 43 0.943 - 0.943 - - - - - - -
74. fam57ba ENSDARG00000026875 504 0.942 - 0.942 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
75. ATP5J 343 0.942 - 0.942 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
76. BX005256.1 ENSDARG00000106112 467 0.941 - 0.941 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
77. nfu1 ENSDARG00000068125 1743 0.941 - 0.941 - - - - - - - NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
78. zgc:109744 ENSDARG00000070800 262 0.94 - 0.940 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
79. si:dkey-154p10.3 ENSDARG00000068366 153 0.94 - 0.940 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
80. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.939 - 0.939 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
81. CT573322.1 CT573322.1 38 0.939 - 0.939 - - - - - - -
82. si:ch211-105d18.6 si:ch211-105d18.6 59 0.939 - 0.939 - - - - - - -
83. TM2D2 ENSDARG00000035515 561 0.938 - 0.938 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
84. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.938 - 0.938 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
85. cmasb 499 0.938 - 0.938 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
86. fam63b 484 0.938 - 0.938 - - - - - - - family with sequence similarity 63, member B
87. CR388047.3 ENSDARG00000117023 89 0.938 - 0.938 - - - - - - -
88. si:dkey-114b16.4 si:dkey-114b16.4 35 0.937 - 0.937 - - - - - - -
89. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.935 - 0.935 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
90. CABZ01066717.1 CABZ01066717.1 351 0.935 - 0.935 - - - - - - -
91. spock3 ENSDARG00000070266, ENSDARG00000110158 934 0.934 - 0.934 - - - - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
92. tex261 ENSDARG00000044584 513 0.934 - 0.934 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
93. pgap2 ENSDARG00000044596 60 0.933 - 0.933 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
94. tbcelb ENSDARG00000019525 299 0.932 - 0.932 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
95. SLC27A2 SLC27A2 436 0.932 - 0.932 - - - - - - -
96. plce1 ENSDARG00000087921 44 0.932 - 0.932 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
97. ppapdc2 ppapdc2 67 0.932 - 0.932 - - - - - - -
98. stk11 ENSDARG00000046074 506 0.932 - 0.932 - - - - - - - serine/threonine kinase 11 [Source:ZFIN;Acc:ZDB-GENE-050417-383]
99. rmdn3 ENSDARG00000041407, ENSDARG00000116827 149 0.932 - 0.932 - - - - - - - regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]
100. smdt1 smdt1 99 0.931 - 0.931 - - - - - - -

There are 1602 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA