Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cope

Gene Name Gene ID Reads Annotation
cope ENSDARG00000018562 17276 coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]










Genes with expression patterns similar to cope

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cope ENSDARG00000018562 17276 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
2. pak2a ENSDARG00000068177 8931 3.106 - 0.753 - - 0.706 0.823 - - 0.824 p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
3. rab11al ENSDARG00000014340 2116 2.664 - - - - - 0.893 0.876 - 0.895 RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
4. cast ENSDARG00000058693 15565 2.425 - 0.741 - - - 0.886 0.798 - - calpastatin [Source:ZFIN;Acc:ZDB-GENE-050810-2]
5. pgam1a ENSDARG00000005423 3986 2.385 - 0.712 - - - - 0.919 - 0.754 phosphoglycerate mutase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1827]
6. zgc:162356 zgc:162356 5115 2.295 - - - 0.724 - - 0.816 - 0.755
7. ppp1cb ENSDARG00000044153 4748 1.831 - - - - - 0.917 0.914 - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
8. adipor1b ENSDARG00000042717 1348 1.821 - - - - - - 0.930 - 0.891 adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
9. FUCA1 FUCA1 1446 1.818 - - - - - 0.881 0.937 - -
10. calr ENSDARG00000076290 13987 1.813 - - 0.972 - - - 0.841 - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
11. col14a1a ENSDARG00000005762 4778 1.812 - - - - - - 0.937 - 0.875 collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
12. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.8 - - - - - - 0.899 - 0.901 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
13. srsf2a ENSDARG00000057484 25721 1.799 - - 0.893 - - - 0.906 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
14. dnajb9a ENSDARG00000052072 578 1.794 - - - - - - 0.898 - 0.896 DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
15. CABZ01078889.1 CABZ01078889.1 911 1.784 - - - - - - 0.901 - 0.883
16. dusp11 ENSDARG00000038156 2490 1.783 - - 0.891 - - - - - 0.892 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
17. erh ENSDARG00000032866 20633 1.777 - - - - - 0.842 0.935 - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
18. plekhh1 ENSDARG00000053835 2123 1.773 - - - - - - 0.906 - 0.867 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
19. fam213aa 1986 1.759 - - - - - 0.807 0.952 - - family with sequence similarity 213, member Aa
20. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.748 - - - - - - 0.926 - 0.822 kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
21. kdelr2a ENSDARG00000005254 13871 1.729 - - - - - - 0.846 - 0.883 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
22. ACTN4_1 ACTN4_1 8550 1.718 - - 0.873 - - - 0.845 - -
23. psmd7 ENSDARG00000102417 4732 1.714 - - - - - 0.766 0.948 - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
24. ef1 1343 1.713 - - - - - 0.778 0.935 - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
25. lamb4 ENSDARG00000039133 1220 1.706 - - - - - 0.750 0.956 - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
26. ifrd1 ENSDARG00000068708 2858 1.704 - - - - 0.736 - 0.968 - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
27. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 1.696 - 0.739 - - - - 0.957 - - Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
28. atl3 ENSDARG00000004270 2806 1.695 - - - - - 0.787 0.908 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
29. NBEAL1 ENSDARG00000099547 1112 1.694 - - - - - 0.776 0.918 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
30. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.694 - - - - - 0.754 0.940 - - ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
31. urah urah 4152 1.69 - - - - - - 0.906 - 0.784
32. TEAD3 TEAD3 8614 1.689 - - - - - 0.879 0.810 - -
33. acadl ENSDARG00000088357, ENSDARG00000115321 1179 1.687 - - - - - 0.798 - - 0.889 acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc:ZDB-GENE-040426-771]
34. wtap ENSDARG00000042642 1779 1.687 - - - - - 0.786 0.901 - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
35. bc2 5213 1.684 - - 0.896 - - 0.788 - - - putative breast adenocarcinoma marker
36. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.682 - - - - - 0.772 0.910 - - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
37. wu:fc34e06 1793 1.68 - - - - - 0.745 0.935 - - wu:fc34e06, transcript variant X10
38. tmed4 ENSDARG00000024954 3476 1.672 - - - - - 0.744 0.928 - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
39. tmem203 ENSDARG00000104996 1182 1.668 - - - - - 0.760 0.908 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
40. tpd52l2b ENSDARG00000013655 9460 1.668 - - - - - 0.721 0.947 - - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
41. alox12 ENSDARG00000069463 5787 1.664 - - - - - 0.802 0.862 - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
42. safb ENSDARG00000020467 5608 1.658 - - - - - 0.732 0.926 - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
43. xpot ENSDARG00000099652 3026 1.658 - - - - - 0.770 - - 0.888 exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
44. tnikb ENSDARG00000009031 1836 1.658 - - - - - 0.759 0.899 - - TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
45. col6a1 ENSDARG00000074908 2339 1.657 - - - - - - 0.942 - 0.715 collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
46. idh3g ENSDARG00000023648 4877 1.655 - - - - - 0.728 0.927 - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
47. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.655 - - 0.899 - - 0.756 - - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
48. hoxc3a ENSDARG00000070339 3379 1.65 - - - - - - 0.897 - 0.753 homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
49. gltscr2 gltscr2 5763 1.649 - - - - - - 0.920 - 0.729
50. VPS37B_1 VPS37B_1 1816 1.648 - - - - 0.719 - 0.929 - -
51. RNF111 ENSDARG00000078802 1357 1.648 - - - - 0.709 - 0.939 - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
52. pkp1b ENSDARG00000052705 1077 1.646 - - - - - 0.748 0.898 - - plakophilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-417]
53. myeov2 3351 1.64 - - - - - 0.769 - - 0.871 myeloma overexpressed 2
54. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.637 - - - - - 0.774 - - 0.863 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
55. EML4_1 EML4_1 8736 1.631 - - - - - 0.743 0.888 - -
56. copa ENSDARG00000004173 3977 1.631 - - - - - 0.721 - - 0.910 coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
57. sly1 sly1 2403 1.63 - - - - - 0.746 - - 0.884
58. tfam ENSDARG00000063145 4524 1.629 - - - - - 0.704 0.925 - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
59. NDUFA3 ENSDARG00000041400 7939 1.624 - - - - 0.713 - 0.911 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
60. cux1b ENSDARG00000043134 641 1.623 - - - - - 0.713 0.910 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
61. tmem189 ENSDARG00000042732 4004 1.619 - - - - - 0.830 0.789 - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
62. nrg2a ENSDARG00000077818 854 1.618 - - - - 0.713 - 0.905 - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
63. bin2b ENSDARG00000010255 2649 1.613 - - - - 0.711 - 0.902 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
64. dnttip2 ENSDARG00000057648 2381 1.61 - - - - 0.714 - 0.896 - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
65. kbp kbp 701 1.608 - - - - - 0.730 - - 0.878
66. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.607 - - - - 0.703 - 0.904 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
67. atp6v1c1b ENSDARG00000035880, ENSDARG00000112507 1869 1.604 - - - - - 0.731 0.873 - - ATPase H+ transporting V1 subunit C1b [Source:ZFIN;Acc:ZDB-GENE-041010-104]
68. emc6 ENSDARG00000035282 4981 1.602 - - - - - - 0.888 - 0.714 ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
69. grp ENSDARG00000043074 747 1.601 - - - - - 0.719 - - 0.882 gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
70. s100v1 ENSDARG00000070427 6633 1.597 - - - - 0.733 0.864 - - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
71. limk2 ENSDARG00000005104 2598 1.587 - - - - 0.717 - - - 0.870 LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
72. soul2 ENSDARG00000039499 1469 1.586 - - - - - 0.881 - - 0.705 heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
73. eif5 ENSDARG00000003681 7986 1.583 - - - - - 0.832 - - 0.751 eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
74. si:dkey-13i19.8 ENSDARG00000093058 4617 1.581 - - - - - 0.709 - - 0.872 si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
75. gpcpd1 ENSDARG00000016011 2563 1.577 - - - - - 0.720 0.857 - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
76. yipf3 ENSDARG00000020449 3312 1.576 - - - - - 0.730 - - 0.846 Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
77. zgc:56530 zgc:56530 6300 1.57 - 0.702 - - - 0.868 - - -
78. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 1.569 - - - - 0.711 - - - 0.858 ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
79. igf2bp1 ENSDARG00000061478 22924 1.567 - 0.864 - - - 0.703 - - - insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
80. anp32a ENSDARG00000006487 28249 1.563 - 0.841 - - - 0.722 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
81. cldnb ENSDARG00000009544 6036 1.56 - 0.771 - - - 0.789 - - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
82. evpla ENSDARG00000019808 7565 1.544 - - - - 0.755 - 0.789 - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
83. cdc20 ENSDARG00000100741 3264 1.54 - - - - - 0.707 - - 0.833 cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
84. slc35c2 ENSDARG00000037517, ENSDARG00000114428 3644 1.538 - - - - 0.719 - 0.819 - - solute carrier family 35 (GDP-fucose transporter), member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]
85. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.528 - - - - 0.741 - - - 0.787 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
86. galnt7 ENSDARG00000057303 2017 1.52 - - - - 0.726 0.794 - - - UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-284]
87. ostc ENSDARG00000104901 16240 1.518 - - - - - 0.801 - - 0.717 oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
88. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.515 - - - - - 0.767 - - 0.748 translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
89. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.514 - 0.701 - - - - 0.813 - - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
90. cpne1 ENSDARG00000075536 4063 1.512 - - - - - - - 0.724 0.788 copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
91. adpgk2 ENSDARG00000062785 8229 1.505 - 0.713 - - - - 0.792 - - ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
92. arpc1a ENSDARG00000008383 7353 1.484 - - - - 0.706 0.778 - - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
93. cldni ENSDARG00000054616, ENSDARG00000111133 16328 1.483 - - - - 0.702 0.781 - - - claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
94. cdc42bpb ENSDARG00000019383 5976 1.476 - 0.716 - - - 0.760 - - - CDC42 binding protein kinase beta (DMPK-like) [Source:ZFIN;Acc:ZDB-GENE-030131-3647]
95. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.473 - - - - - 0.701 0.772 - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
96. nfe2l3 ENSDARG00000019810 3682 1.458 - - - - - 0.730 - - 0.728 nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
97. aplp2 ENSDARG00000054864 7958 1.458 - - - - - - 0.715 - 0.743 amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]
98. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 1.445 - - - - 0.709 0.736 - - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
99. notch2 ENSDARG00000043130 4430 1.444 - - - - 0.723 0.721 - - - notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
100. si:ch211-11k18.4 ENSDARG00000087869 3298 1.427 - - - - - 0.717 - - 0.710 si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]

There are 1330 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA