Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for copb2

Gene Name Gene ID Reads Annotation
copb2 ENSDARG00000038743, ENSDARG00000114286 6404 coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]










Genes with expression patterns similar to copb2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
2. ezrb ENSDARG00000025091 2861 2.785 - 0.963 - - - - 0.870 0.952 - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
3. fbxo28 ENSDARG00000027159 9602 2.784 - 0.972 - - - - 0.861 0.951 - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
4. galnt12 ENSDARG00000055490 1653 2.7 - - - - - - 0.739 0.980 0.981 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
5. smox ENSDARG00000036967 3816 2.664 - 0.967 - - - - 0.729 0.968 - spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
6. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 2.619 - - - - - - 0.820 0.918 0.881 isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
7. s100v1 ENSDARG00000070427 6633 2.598 - - - - - - 0.807 0.884 0.907 S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
8. s100u ENSDARG00000071014 4754 2.595 - - - - - - 0.813 0.956 0.826 S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
9. hm13 ENSDARG00000037846 5019 2.569 - - 0.732 - - - - 0.985 0.852 histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
10. gpx7 ENSDARG00000091511 3045 2.45 - - - - - - 0.736 0.901 0.813 glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
11. atp2b4 5891 2.447 - 0.899 - - - - 0.767 - 0.781 ATPase, Ca++ transporting, plasma membrane 4
12. ZNF337_3 ZNF337_3 561 1.968 - - - - - - - 0.987 0.981
13. met ENSDARG00000070903 2088 1.947 - 0.961 - - - - - - 0.986 MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
14. si:dkey-118j18.2 ENSDARG00000096457 5293 1.906 - - - - - - - 0.933 0.973 si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
15. llgl2 ENSDARG00000023920 2617 1.89 - - - - - - 0.923 - 0.967 lethal giant larvae homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-9877]
16. zgc:91985 zgc:91985 1517 1.885 - - - - - - 0.904 - 0.981
17. zgc:113442 ENSDARG00000101906 3092 1.87 - - - - - - 0.904 - 0.966 zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
18. si:ch73-110p20.1 5932 1.867 - 0.952 - - - - - 0.915 - si:ch73-110p20.1
19. magt1 ENSDARG00000058062 3903 1.857 - - - - - - 0.877 - 0.980 magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
20. serpinf1 ENSDARG00000069048 2083 1.852 - - - - - - - 0.891 0.961 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
21. tmem176l.4 ENSDARG00000074390 1886 1.85 - - - - - - 0.868 - 0.982 transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
22. emc3 ENSDARG00000020607 3406 1.835 - 0.968 - - - - 0.867 - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
23. ajuba ENSDARG00000077842 1152 1.831 - - - - - - 0.849 - 0.982 ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
24. piezo1 ENSDARG00000076870 4704 1.797 - - - - - - 0.904 0.893 - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
25. padi2 ENSDARG00000044167 6765 1.793 - - - - - - 0.931 - 0.862 peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
26. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 1.782 - 0.969 - - - - 0.813 - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
27. pvrl1b 1645 1.781 - - - - - - 0.792 0.989 - poliovirus receptor-related 1b
28. adam10a ENSDARG00000053468 9308 1.771 - - - - - - 0.832 - 0.939 ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
29. lman1 ENSDARG00000069980 2550 1.76 - - - - - - 0.782 0.978 - lectin, mannose-binding, 1 [Source:ZFIN;Acc:ZDB-GENE-060201-4]
30. CABZ01103862.1 ENSDARG00000109235 3223 1.758 - - - - - - 0.796 - 0.962
31. clpxb ENSDARG00000067796 1918 1.757 - 0.969 - - - - 0.788 - - caseinolytic mitochondrial matrix peptidase chaperone subunit b [Source:ZFIN;Acc:ZDB-GENE-130404-1]
32. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.757 - - - - - - 0.777 - 0.980 glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
33. si:ch73-73d17.3 si:ch73-73d17.3 925 1.753 - - - - - - 0.783 - 0.970
34. ppfibp2b ENSDARG00000029168 961 1.751 - 0.958 - - - - 0.793 - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
35. rgs12b ENSDARG00000036774 5088 1.75 - - - - - - 0.799 - 0.951 regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
36. aup1 ENSDARG00000092609 2431 1.749 - - - - - - 0.772 - 0.977 ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
37. gpd1c ENSDARG00000036942 869 1.747 - 0.961 - - - - 0.786 - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
38. arcn1a ENSDARG00000002792 2847 1.744 - - - - - - 0.772 - 0.972 archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
39. psmd11a ENSDARG00000060150 4529 1.744 - 0.961 - - - - 0.783 - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
40. zgc:111974 zgc:111974 1386 1.74 - 0.960 - - - - 0.780 - -
41. GOLPH3 ENSDARG00000052851, ENSDARG00000109334 3117 1.736 - - - - - - 0.774 - 0.962 golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
42. ywhabb ENSDARG00000075758 23104 1.735 - - - - - - 0.877 - 0.858 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
43. RPRD1A ENSDARG00000104861 2560 1.732 - - - - - - 0.751 0.981 - regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
44. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.726 - - - - - - 0.737 0.989 - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
45. acaa2 ENSDARG00000038881 2649 1.722 - - - - - - 0.753 0.969 - acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
46. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.717 - - - - - - 0.855 0.862 - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
47. arhgdig ENSDARG00000004034 10368 1.717 - - - - - - 0.749 0.968 - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
48. fam89a ENSDARG00000079979 4375 1.714 - - - - - - 0.792 0.922 - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
49. grhl3 ENSDARG00000078552 897 1.713 - - - - - - 0.727 0.986 - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
50. bcar3 ENSDARG00000016981 714 1.712 - - - - - - 0.729 - 0.983 BCAR3, NSP family adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080513-4]
51. arhgef25b ENSDARG00000014465 669 1.712 - - - - - - 0.730 - 0.982 Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
52. arpc5b ENSDARG00000019062 2786 1.71 - - - - - - 0.888 - 0.822 actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
53. rcor1 ENSDARG00000031434 2733 1.705 - - - - - - 0.824 0.881 - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
54. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.702 - - - - - - 0.714 0.988 - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
55. rac2 ENSDARG00000038010 5837 1.701 - - - - - - 0.870 0.831 - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
56. prp19 prp19 4804 1.701 - - - - - - 0.810 - 0.891
57. bambia ENSDARG00000055381 2922 1.698 - - - - - - 0.789 - 0.909 BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
58. cav1 ENSDARG00000103747 15519 1.697 - - - - - - 0.763 0.934 - caveolin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2415]
59. ppp2r1b ppp2r1b 3469 1.696 - - - - - - 0.723 0.973 -
60. plcd1b ENSDARG00000034080 4074 1.692 - - - - - - 0.765 0.927 - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
61. vox ENSDARG00000099761 801 1.692 - - - - - - 0.710 - 0.982 ventral homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-1]
62. max ENSDARG00000024844 6035 1.686 - 0.976 - - - - 0.710 - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
63. bambib ENSDARG00000099677 4267 1.685 - - - - - - 0.715 0.970 - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
64. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.68 - 0.969 - - - - 0.711 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
65. spcs1 ENSDARG00000059298 5327 1.672 - - - - - - 0.809 - 0.863 signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
66. wu:fb54a03 wu:fb54a03 1722 1.669 - 0.963 - - - - 0.706 - -
67. acsbg1 ENSDARG00000062077 2020 1.669 - 0.966 - - - - 0.703 - - acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
68. ppp1r13l ENSDARG00000013777 2260 1.656 - - - - - - 0.803 - 0.853 protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
69. glrx ENSDARG00000028106 16225 1.63 - - - - - - 0.772 - 0.858 glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
70. CABZ01092303.1 CABZ01092303.1 8825 1.624 - - - - - - 0.794 0.830 -
71. EML4_1 EML4_1 8736 1.618 - - - - - - - 0.808 0.810
72. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.617 - - - - - - 0.794 - 0.823 ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
73. tfap2c ENSDARG00000040606 4628 1.589 - - - - - - 0.823 - 0.766 transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
74. ip6k2 ip6k2 3926 1.581 - - - - - - 0.742 - 0.839
75. cbx5 ENSDARG00000061187 24026 1.574 - - - - - - 0.730 0.844 - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
76. ACTR3 ENSDARG00000091138 1739 1.573 - - - - - - 0.706 0.867 - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
77. si:ch211-11k18.4 ENSDARG00000087869 3298 1.573 - - - - - - 0.719 - 0.854 si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
78. irf2bp2b ENSDARG00000098635 1961 1.569 - - - - - - 0.714 - 0.855 interferon regulatory factor 2 binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2574]
79. fkbp9 ENSDARG00000005023 17518 1.568 - - - - - - - 0.704 0.864 FK506 binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-040801-23]
80. arf1l arf1l 9119 1.554 - - - - - - 0.782 - 0.772
81. cnn2 ENSDARG00000035858 18201 1.528 - - - - - - 0.812 0.716 - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
82. zc3h7b 2936 1.519 - - - - - - 0.720 - 0.799 zinc finger CCCH-type containing 7B
83. SLC25A24 ENSDARG00000008568 2005 1.502 0.714 - - - - - 0.788 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
84. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.474 - - - - - - 0.721 - 0.753 Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
85. anp32e ENSDARG00000054804 11017 1.474 - - - - - - - 0.741 0.733 acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
86. lamb1a ENSDARG00000101209 5396 1.453 - - - - - - 0.730 - 0.723 laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
87. pacsin2 ENSDARG00000078014 1582 0.993 - - - - - - - 0.993 - protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]
88. gpx8 ENSDARG00000013302 1427 0.991 - - - - - - - 0.991 - glutathione peroxidase 8 (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-965]
89. KIF26A KIF26A 1077 0.99 - - - - - - - - 0.990
90. elovl6 ENSDARG00000004402, ENSDARG00000114205 2286 0.99 - - - - - - - - 0.990 ELOVL fatty acid elongase 6 [Source:ZFIN;Acc:ZDB-GENE-030114-1]
91. map3k3 ENSDARG00000060348 1482 0.989 - - - - - - - - 0.989 mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
92. ildr1a ENSDARG00000103929 2390 0.988 - - - - - - - 0.988 - immunoglobulin-like domain containing receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1412]
93. tchp ENSDARG00000035605 1695 0.988 - - - - - - - - 0.988 trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
94. CABZ01088039.1 CABZ01088039.1 2482 0.988 - - - - - - - - 0.988
95. paip1 ENSDARG00000042892 902 0.988 - - - - - - - - 0.988 poly(A) binding protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-247]
96. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 0.987 - 0.987 - - - - - - - MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
97. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.987 - - - - - - - 0.987 - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
98. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 0.987 - - - - - - - 0.987 - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
99. smad9 368 0.987 - - - - - - - 0.987 - SMAD family member 9, transcript variant X1
100. trpm4 trpm4 501 0.987 - - - - - - - 0.987 -

There are 1268 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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