Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for copb1

Gene Name Gene ID Reads Annotation
copb1 ENSDARG00000056557, ENSDARG00000116045 7395 coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]










Genes with expression patterns similar to copb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
2. txnipa ENSDARG00000036107 8863 2.721 - - 0.887 - - 0.945 0.889 - - thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
3. pes ENSDARG00000018902 3286 2.608 - - - - - 0.981 0.785 0.842 - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
4. CABZ01088039.1 CABZ01088039.1 2482 2.599 - 0.803 - - - 0.981 0.815 - -
5. kdelr2a ENSDARG00000005254 13871 2.569 - - 0.795 - - 0.921 0.853 - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
6. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 2.536 - 0.718 - - - - 0.857 - 0.961 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
7. arpc4l ENSDARG00000058225 10107 2.504 - 0.852 0.720 - - - 0.932 - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
8. gstp1 ENSDARG00000104068 12698 2.342 - 0.720 - - - 0.833 - 0.789 - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
9. col14a1a ENSDARG00000005762 4778 2.339 - 0.716 0.801 - - - 0.822 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
10. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 1.942 - - - - - 0.981 - - 0.961 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
11. snx12 ENSDARG00000019060 9563 1.922 - - - - - 0.976 - - 0.946 sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
12. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 1.899 - - - - - 0.984 0.915 - - Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
13. smyd5 ENSDARG00000071669 1194 1.844 - - - - - - - 0.883 0.961 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
14. cdc42 ENSDARG00000044573 11795 1.836 - - - - - 0.950 0.886 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
15. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 1.833 - - - - - 0.985 0.848 - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
16. FAR2 FAR2 1459 1.828 - - - - - 0.982 0.846 - -
17. cldne ENSDARG00000043128 6960 1.822 - - - - - 0.979 - 0.843 - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
18. ckap5 ENSDARG00000102674 5068 1.816 - - - - - - 0.868 - 0.948 cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
19. evpla ENSDARG00000019808 7565 1.815 - - - - - 0.971 0.844 - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
20. snrpd1 ENSDARG00000011648 8615 1.806 - - - - - - 0.854 - 0.952 small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
21. arf1l arf1l 9119 1.805 - - 0.847 - - 0.958 - - -
22. zgc:63587 ENSDARG00000017140 8399 1.798 - - - - - 0.873 0.925 - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
23. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.796 - 0.811 - - - 0.985 - - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
24. rpl4 ENSDARG00000041182 18655 1.787 - - - - - 0.874 - - 0.913 ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
25. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.782 - - - - - 0.982 0.800 - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
26. prpf39 ENSDARG00000100209 3721 1.782 - - - - - - 0.819 - 0.963 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
27. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.767 - - 0.815 - - - - - 0.952 antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
28. tmem258 ENSDARG00000078785 9578 1.762 - 0.941 0.821 - - - - - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
29. sf3b4 ENSDARG00000018574 7470 1.757 - - - - - 0.985 0.772 - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
30. VPS37C ENSDARG00000031836 906 1.751 - - - - - 0.983 0.768 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
31. slc2a2 ENSDARG00000056196 2061 1.747 - 0.839 - - - - 0.908 - - solute carrier family 2 (facilitated glucose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1213]
32. zgc:92380 ENSDARG00000041339 1867 1.741 - - - - - - 0.819 0.922 - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
33. gigfy2 3194 1.741 - - - - - - 0.844 0.897 - GRB10 interacting GYF protein 2, transcript variant X1
34. scaf11 ENSDARG00000045885 3531 1.734 - - - - - - 0.853 0.881 - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
35. parvaa ENSDARG00000043710 3495 1.734 - 0.755 - - - 0.979 - - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
36. cnih4 ENSDARG00000087759 3937 1.731 - 0.783 - - - - - - 0.948 cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
37. dyrk1b ENSDARG00000070187 2777 1.723 - - - - - - 0.800 0.923 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
38. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.72 - - - - - - 0.814 - 0.906 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
39. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 1.719 - - - - - - 0.768 - 0.951 Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
40. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 1.718 - 0.734 - - - 0.984 - - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
41. rcan2 ENSDARG00000021869 874 1.717 - 0.729 - - - 0.988 - - - regulator of calcineurin 2 [Source:ZFIN;Acc:ZDB-GENE-040516-17]
42. amd1 ENSDARG00000043856, ENSDARG00000111778 9667 1.713 - - - - - 0.967 0.746 - - adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
43. psmb2 ENSDARG00000031511 4016 1.713 - - 0.859 - - - - 0.854 - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
44. pcl pcl 2862 1.712 - 0.729 - - - 0.983 - - -
45. hnrpdl 14288 1.712 - - - - - 0.940 0.772 - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
46. nup98 ENSDARG00000074955 3998 1.705 - 0.743 - - - - - - 0.962 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
47. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.704 - - - - - - 0.927 0.777 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
48. tmem134 ENSDARG00000024828 3241 1.7 - 0.717 - - - 0.983 - - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
49. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 1.698 - 0.716 - - - 0.982 - - - myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
50. cebpb ENSDARG00000042725 3921 1.688 - 0.808 - - - - - 0.880 - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
51. cyb5a ENSDARG00000098589 9430 1.687 - 0.707 - - - 0.980 - - - cytochrome b5 type A (microsomal) [Source:ZFIN;Acc:ZDB-GENE-040426-2148]
52. triqk ENSDARG00000076296 1274 1.686 0.703 - - - - 0.983 - - - triple QxxK/R motif containing [Source:ZFIN;Acc:ZDB-GENE-070705-75]
53. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.685 - 0.724 - - - - - - 0.961 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
54. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.684 - - - - - 0.945 0.739 - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
55. dpm3 ENSDARG00000058650 4386 1.68 - - 0.881 - - - 0.799 - - dolichyl-phosphate mannosyltransferase polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1782]
56. lpp ENSDARG00000023578 3581 1.68 - - 0.799 - - - 0.881 - - LIM domain containing preferred translocation partner in lipoma [Source:ZFIN;Acc:ZDB-GENE-040426-918]
57. gata3 ENSDARG00000016526 1857 1.68 - 0.720 - - - - - - 0.960 GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
58. arl1 ENSDARG00000101680 5973 1.674 - 0.786 - - - - 0.888 - - ADP-ribosylation factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-175]
59. frem1a ENSDARG00000069473 1847 1.672 - - - - - - 0.809 0.863 - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
60. uba5 ENSDARG00000063588 1260 1.672 - - - - - - 0.802 0.870 - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
61. agk ENSDARG00000009837, ENSDARG00000113514 811 1.666 - - - - - - 0.779 0.887 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
62. myo9b ENSDARG00000077410 1956 1.663 - 0.772 - - - - - 0.891 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
63. yy1b ENSDARG00000027978 2669 1.663 - - - - - - 0.787 0.876 - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
64. lasp1 ENSDARG00000057867 18721 1.658 - - 0.795 - - - 0.863 - - LIM and SH3 protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1936]
65. COL13A1 1565 1.657 - - - - - - 0.791 0.866 - collagen, type XIII, alpha 1, transcript variant X1
66. lsm12b ENSDARG00000109510 14459 1.655 - 0.782 - - - 0.873 - - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
67. csrp1a ENSDARG00000006603 5188 1.652 - 0.732 - - - - - 0.920 - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
68. RBBP8NL RBBP8NL 813 1.647 - - - - - - 0.795 0.852 -
69. urah urah 4152 1.645 - 0.799 - - - - 0.846 - -
70. sepw2b 3942 1.642 - - - - - - 0.853 0.789 - selenoprotein W, 2b
71. padi2 ENSDARG00000044167 6765 1.634 - - - - - 0.913 - 0.721 - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
72. abl1 ENSDARG00000035187 3553 1.633 - - - - - - 0.795 0.838 - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
73. tmbim4 ENSDARG00000014361 2549 1.631 - 0.802 - - - - 0.829 - - transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
74. coro2a ENSDARG00000005210 1479 1.617 - 0.700 - - - - - 0.917 - coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
75. CABZ01079427.1 CABZ01079427.1 1682 1.614 - 0.784 - - - - 0.830 - -
76. ppp1cb ENSDARG00000044153 4748 1.612 - 0.722 - - - - 0.890 - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
77. mef2ca ENSDARG00000029764 18547 1.611 - - - - - 0.826 - 0.785 - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
78. gpcpd1 ENSDARG00000016011 2563 1.611 - 0.765 - - - - 0.846 - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
79. nr0b2a ENSDARG00000044685 2508 1.604 - 0.769 - - - - 0.835 - - nuclear receptor subfamily 0, group B, member 2a [Source:ZFIN;Acc:ZDB-GENE-080403-1]
80. arpc5a ENSDARG00000039142 5482 1.602 - - 0.711 - - - - 0.891 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
81. cav3 ENSDARG00000024141 14906 1.6 - - - - - - - 0.706 0.894 caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
82. fermt1 ENSDARG00000052652 2394 1.6 - 0.706 - - - - 0.894 - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
83. CABZ01080098.1 ENSDARG00000110680 10942 1.598 - 0.898 - - - 0.700 - - -
84. cdh1 ENSDARG00000102750 8654 1.598 - 0.765 - - - - - 0.833 - cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
85. pawr ENSDARG00000045486 1580 1.597 - 0.727 - - - - 0.870 - - PRKC, apoptosis, WT1, regulator [Source:ZFIN;Acc:ZDB-GENE-041010-108]
86. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.594 - - - - - - 0.842 0.752 - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
87. CABZ01081490.1 ENSDARG00000111653 11892 1.592 - - - - - - 0.812 0.780 -
88. cd9b ENSDARG00000016691 15573 1.589 - - 0.705 - - - 0.884 - - CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
89. arl4ca ENSDARG00000057606 4686 1.576 - 0.841 - - - 0.735 - - - ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
90. zgc:101000 zgc:101000 9041 1.574 - 0.805 - - - - - 0.769 -
91. slc11a2 ENSDARG00000024295 3197 1.571 - 0.731 - - - - 0.840 - - solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-021115-1]
92. inppl1a ENSDARG00000104222 6256 1.561 - 0.713 - - - - 0.848 - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
93. mid1ip1a ENSDARG00000041051 5425 1.555 - 0.791 - - - - 0.764 - - MID1 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-990415-81]
94. si:dkey-235d18.5 ENSDARG00000039652 667 1.546 0.712 - - - - - 0.834 - - si:dkey-235d18.5 [Source:ZFIN;Acc:ZDB-GENE-041014-243]
95. si:ch211-149l1.2 ENSDARG00000079501 440 1.54 - 0.712 - - - - 0.828 - - si:ch211-149l1.2 [Source:ZFIN;Acc:ZDB-GENE-090313-40]
96. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.536 - - 0.719 - - - 0.817 - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
97. nmt1a ENSDARG00000052966 5918 1.53 - - - - - - 0.805 0.725 - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
98. ndrg2 ENSDARG00000011170 11442 1.526 - - - - - - 0.738 0.788 - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
99. serpinb1l4 ENSDARG00000096888 10462 1.526 - - - - - - 0.721 0.805 - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7169]
100. sp9 ENSDARG00000099374 2266 1.52 - 0.702 - - - - 0.818 - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]

There are 1234 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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