Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for copa

Gene Name Gene ID Reads Annotation
copa ENSDARG00000004173 3977 coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]










Genes with expression patterns similar to copa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. copa ENSDARG00000004173 3977 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
2. zgc:153952 739 2.464 0.748 - 0.759 - - - - - 0.957 zgc:153952, transcript variant X1
3. axin2 ENSDARG00000100149 4223 2.417 - 0.735 - - - - 0.791 - 0.891 axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
4. map3k7 ENSDARG00000020469 2845 2.413 - - 0.730 - - - 0.768 - 0.915 mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
5. pak2a ENSDARG00000068177 8931 2.385 - - 0.748 - - 0.773 - - 0.864 p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
6. GCA GCA 5211 2.374 - - - - - 0.816 0.753 - 0.805
7. eif3ja ENSDARG00000012603 6324 2.329 - 0.796 - - - 0.745 - - 0.788 eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
8. klf6a ENSDARG00000029072 3758 2.287 - - 0.745 - - 0.707 - - 0.835 Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
9. wasf2 ENSDARG00000024209 5338 2.265 - 0.738 - - - 0.770 0.757 - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
10. bckdk ENSDARG00000016904 3775 2.264 - 0.758 - - - 0.780 0.726 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
11. prkar1aa ENSDARG00000076128 6565 2.246 - - 0.760 - - 0.726 0.760 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
12. tmem214 ENSDARG00000016968 3772 2.241 - 0.741 0.763 - - - 0.737 - - transmembrane protein 214 [Source:ZFIN;Acc:ZDB-GENE-110307-2]
13. src ENSDARG00000008107 3643 2.213 0.733 - 0.746 - - 0.734 - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
14. dazap2 ENSDARG00000007867 1805 2.178 0.703 0.722 - - - - 0.753 - - DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
15. anapc16 ENSDARG00000013822 5857 1.736 - - - - - - 0.847 - 0.889 anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
16. dctn3 ENSDARG00000041363 3351 1.736 - 0.780 - - - - - - 0.956 dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
17. ufm1 ENSDARG00000043857 4152 1.731 - 0.812 - - - - - - 0.919 ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
18. adamts6 ENSDARG00000041982 320 1.727 0.759 - - - - - - - 0.968 ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:ZFIN;Acc:ZDB-GENE-091113-9]
19. ist1 ENSDARG00000051888 4536 1.725 - - - - - 0.804 - - 0.921 increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
20. myeov2 3351 1.725 - - - - - - 0.811 - 0.914 myeloma overexpressed 2
21. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.722 - - - - - - 0.790 - 0.932 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
22. wu:fb54a03 wu:fb54a03 1722 1.71 - - - - - - 0.767 - 0.943
23. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.71 0.744 - - - - - - - 0.966 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
24. nucks1b ENSDARG00000012777 4468 1.697 - 0.756 - - - - - - 0.941 nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
25. si:dkey-13i19.8 ENSDARG00000093058 4617 1.696 - 0.768 - - - - - - 0.928 si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
26. rap2b ENSDARG00000103032 2080 1.69 - 0.721 - - - - - - 0.969 RAP2B, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2818]
27. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.69 - - - - - - 0.757 - 0.933 nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
28. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 1.689 - - - - - - 0.722 - 0.967 SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
29. alg2 ENSDARG00000070399 772 1.68 - 0.713 - - - - - - 0.967 asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
30. ATF6B 960 1.675 - - 0.712 - - - - - 0.963 activating transcription factor 6 beta
31. eci1 ENSDARG00000018002 2141 1.667 - - - - - - 0.706 - 0.961 enoyl-CoA delta isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6033]
32. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.662 - 0.738 - - - - - - 0.924 glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
33. mgst1 mgst1 2820 1.656 - 0.791 - - - - 0.865 - -
34. si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 1.656 - - - - - - 0.760 - 0.896 si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]
35. EIF4G1_1 EIF4G1_1 3721 1.655 - 0.779 - - - - - - 0.876
36. tead3a ENSDARG00000074321 2240 1.651 - - 0.716 - - - - - 0.935 TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
37. cnn3a ENSDARG00000099510 6063 1.647 - - - - - 0.845 0.802 - - calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
38. APOD APOD 3404 1.646 - - 0.787 - - - - - 0.859
39. ctdsp1 ENSDARG00000040674 2828 1.64 0.708 - - - - - - - 0.932 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
40. limk2 ENSDARG00000005104 2598 1.637 - 0.720 - - - - - - 0.917 LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
41. lin7c ENSDARG00000027322 3083 1.636 - 0.740 - - - - - - 0.896 lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
42. ssr2 ENSDARG00000005230 31940 1.633 - - - - - - 0.717 - 0.916 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
43. cope ENSDARG00000018562 17276 1.631 - - - - - 0.721 - - 0.910 coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
44. serinc2 ENSDARG00000056532 1406 1.628 - 0.703 - - - - 0.925 - - serine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
45. hcls1 ENSDARG00000012729 1547 1.623 - - - - - 0.712 - - 0.911 hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
46. pxn_1 pxn_1 3991 1.615 - - - - - 0.778 0.837 - -
47. PIK3CA_1 PIK3CA_1 4065 1.608 - 0.891 - - - - 0.717 - -
48. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.599 - - - - - - 0.821 0.778 - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
49. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.589 - - 0.701 - - - - - 0.888 transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
50. adam10a ENSDARG00000053468 9308 1.584 - - - - - 0.742 0.842 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
51. cdc42ep4b ENSDARG00000045036 1295 1.579 - 0.774 - - - - 0.805 - - CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
52. grip1 ENSDARG00000015053 1275 1.574 0.724 0.850 - - - - - - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
53. cyfip1 ENSDARG00000044345 5483 1.574 - - - - - 0.745 0.829 - - cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
54. TCEB3 2429 1.573 - 0.716 - - - 0.857 - - - transcription elongation factor B (SIII), polypeptide 3
55. itgav ENSDARG00000006314 4277 1.57 0.752 - - - - - 0.818 - - integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
56. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.569 0.752 - - - - - 0.817 - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
57. vasp vasp 3925 1.567 - - - - - 0.721 - - 0.846
58. ap1s1 ENSDARG00000056803 3854 1.567 - 0.831 0.736 - - - - - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
59. tmem251 ENSDARG00000042341 1102 1.566 0.857 0.709 - - - - - - - transmembrane protein 251 [Source:ZFIN;Acc:ZDB-GENE-041001-121]
60. exosc1 ENSDARG00000059841 6895 1.565 - 0.803 - - - - 0.762 - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
61. sdc4 ENSDARG00000059906 10105 1.563 - 0.813 - - - - 0.750 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
62. adipor2 ENSDARG00000101849 3156 1.562 - - - - - 0.743 0.819 - - adiponectin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-60]
63. cnn2 ENSDARG00000035858 18201 1.56 - - - - - 0.812 0.748 - - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
64. arcn1a ENSDARG00000002792 2847 1.553 - 0.751 - - - 0.802 - - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
65. BOLA2B BOLA2B 2957 1.551 - 0.790 - - - 0.761 - - -
66. THOP1 ENSDARG00000013776 2717 1.551 - - 0.771 - - - - - 0.780 thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
67. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 1.55 - 0.770 - - - - 0.780 - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
68. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.548 - - - - - 0.706 - - 0.842 translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
69. CD99L2 ENSDARG00000056722 5588 1.547 - - - - - 0.779 0.768 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
70. capn2a ENSDARG00000091699 5924 1.541 - - - - - - 0.782 - 0.759 calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
71. hif1ab ENSDARG00000034293 10284 1.541 - - - - - 0.705 - - 0.836 hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
72. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.541 0.746 - - - - - 0.795 - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
73. pcbp2 ENSDARG00000099039 4248 1.54 - 0.712 - - - - - - 0.828 poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
74. ncoa3 ENSDARG00000077404 1957 1.536 - 0.750 0.786 - - - - - - nuclear receptor coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-051107-8]
75. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.535 - - - - - - 0.785 0.750 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
76. clptm1l ENSDARG00000021048 1234 1.535 0.803 - 0.732 - - - - - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
77. antxr1c ENSDARG00000063612 3203 1.534 - - 0.731 - - - 0.803 - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
78. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.533 - - 0.758 - - - 0.775 - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
79. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.531 - 0.727 - - - - 0.804 - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
80. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.531 - - - - - - 0.709 - 0.822 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
81. parvaa ENSDARG00000043710 3495 1.53 0.790 0.740 - - - - - - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
82. zgc:56493 ENSDARG00000031435 33407 1.529 - - - - - 0.745 0.784 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
83. tmub1 ENSDARG00000038787 1012 1.528 0.783 - 0.745 - - - - - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
84. ywhaz ENSDARG00000032575 15257 1.523 - - - - - - 0.805 - 0.718 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
85. srgap2a srgap2a 7197 1.521 - 0.753 - - - - 0.768 - -
86. zgc:56530 zgc:56530 6300 1.517 - - - - - 0.807 0.710 - -
87. si:ch211-196l7.4 ENSDARG00000095451 3766 1.516 - 0.736 - - - 0.780 - - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
88. tfap2a ENSDARG00000059279 3741 1.514 - - - - - - 0.705 - 0.809 transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
89. lims1 ENSDARG00000026985 2072 1.513 - 0.767 - - - - 0.746 - - LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
90. AL929434.1 AL929434.1 3294 1.513 0.766 - - - - - 0.747 - -
91. CU915738.1 CU915738.1 3723 1.512 - - - - - 0.739 0.773 - -
92. sra1 ENSDARG00000053619 2799 1.51 0.749 - 0.761 - - - - - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
93. nfe2l3 ENSDARG00000019810 3682 1.509 - - - - - 0.701 - - 0.808 nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
94. col6a1 ENSDARG00000074908 2339 1.508 - 0.790 - - - - - - 0.718 collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
95. psenen ENSDARG00000068698 2777 1.506 - 0.761 0.745 - - - - - - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
96. ywhabl ENSDARG00000040287 39045 1.505 - - - - - 0.720 0.785 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
97. tgfb1a ENSDARG00000041502 972 1.492 - 0.779 - - - - 0.713 - - transforming growth factor, beta 1a [Source:ZFIN;Acc:ZDB-GENE-030618-1]
98. FP102272.1 FP102272.1 9473 1.492 - - - - - 0.767 - - 0.725
99. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.49 - 0.755 0.735 - - - - - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
100. alcamb ENSDARG00000058538 5672 1.49 - 0.754 - - - - - - 0.736 activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]

There are 1378 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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