Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for commd7

Gene Name Gene ID Reads Annotation
commd7 ENSDARG00000036784, ENSDARG00000111683 997 COMM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040801-96]










Genes with expression patterns similar to commd7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. commd7 ENSDARG00000036784, ENSDARG00000111683 997 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 COMM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040801-96]
2. mir203a 1519 1.755 - 0.869 - - - - 0.886 - - microRNA 203a
3. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 1.657 - - - 0.885 - - 0.772 - - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
4. PDGFC ENSDARG00000077588 1064 1.636 - 0.819 - - - - 0.817 - - platelet derived growth factor c [Source:ZFIN;Acc:ZDB-GENE-071217-2]
5. CU367845.1_1 CU367845.1_1 43 1.602 - 0.806 - - - - - 0.796 -
6. adam17a ENSDARG00000043213 1305 1.592 - 0.850 - - - - - 0.742 - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
7. egfl6 ENSDARG00000045958 335 1.578 - 0.810 - - - - 0.768 - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
8. slc44a1b ENSDARG00000090982 240 1.571 - - - - - - 0.792 0.779 - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
9. rhbdl2 ENSDARG00000069833, ENSDARG00000109477 891 1.571 - - - 0.736 - - 0.835 - - rhomboid, veinlet-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-732]
10. CFP ENSDARG00000094451 852 1.565 - 0.702 - - - - 0.863 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
11. si:dkey-56e3.2 ENSDARG00000092551 835 1.562 - 0.723 - - - - 0.839 - - si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
12. reep3 reep3 2536 1.555 - - - 0.832 - - 0.723 - -
13. fam83d ENSDARG00000077883 897 1.554 - - - 0.712 - - 0.842 - - family with sequence similarity 83, member D [Source:ZFIN;Acc:ZDB-GENE-041111-264]
14. pde4cb ENSDARG00000002411 63 1.541 - 0.751 - - - - - 0.790 - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
15. crfb8 crfb8 392 1.54 - 0.745 - - - - 0.795 - -
16. prkceb ENSDARG00000069928, ENSDARG00000114025 330 1.539 - - - - - - 0.748 0.791 - protein kinase C, epsilon b [Source:ZFIN;Acc:ZDB-GENE-081028-47]
17. fah ENSDARG00000101762 274 1.533 - - - - - - 0.732 0.801 - fumarylacetoacetate hydrolase (fumarylacetoacetase) [Source:ZFIN;Acc:ZDB-GENE-030131-1091]
18. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 1.522 - 0.806 - - - - 0.716 - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
19. zfpl1 ENSDARG00000103453 860 1.516 - 0.803 - - - - - 0.713 - zinc finger protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1255]
20. tbx16 ENSDARG00000007329 255 1.509 - 0.808 - 0.701 - - - - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
21. CU928070.1 CU928070.1 1152 1.509 - - - - - - 0.724 0.785 -
22. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.496 - - - - - - 0.781 0.715 - abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
23. pank1a ENSDARG00000008192, ENSDARG00000110385, ENSDARG00000113933 913 1.488 0.742 0.746 - - - - - - - pantothenate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2846]
24. rer1 ENSDARG00000012747 6939 1.485 - - - 0.709 - - 0.776 - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
25. cxcr7b cxcr7b 2482 1.485 - - - 0.715 - - 0.770 - -
26. dctn5 ENSDARG00000003573 1100 1.484 - 0.734 - - - - - 0.750 - dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
27. nt5c1bb ENSDARG00000033742 1248 1.479 - - - - - - 0.759 0.720 - 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
28. SLC12A7 SLC12A7 1702 1.476 - 0.753 - - - - 0.723 - -
29. MTFP1 210 1.471 - 0.746 - - - - 0.725 - - mitochondrial fission process 1
30. manf ENSDARG00000063177, ENSDARG00000114083 570 1.471 - 0.765 - - - - - 0.706 - mesencephalic astrocyte-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-060929-640]
31. SP6 ENSDARG00000099880, ENSDARG00000110548 665 1.471 - 0.756 - - - - 0.715 - - Sp6 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-1824]
32. USO1 ENSDARG00000019581 1617 1.452 - - - - - - 0.742 0.710 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
33. myo1eb ENSDARG00000009133, ENSDARG00000109491 2396 1.452 0.707 - - - - - 0.745 - - myosin IE, b [Source:ZFIN;Acc:ZDB-GENE-040426-1347]
34. ptbp1a ENSDARG00000019362 6290 1.451 - - - 0.747 - - 0.704 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
35. si:dkey-225d17.2 si:dkey-225d17.2 361 0.944 - - - 0.944 - - - - -
36. grm4 ENSDARG00000040156 342 0.932 - - - 0.932 - - - - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
37. fut8 fut8 652 0.923 - - - 0.923 - - - - -
38. ccdc43 ENSDARG00000054446 757 0.92 - - - 0.920 - - - - - coiled-coil domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1587]
39. xrcc1 ENSDARG00000009494 1346 0.918 - 0.918 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
40. mospd1 ENSDARG00000028614, ENSDARG00000112883 697 0.915 - 0.915 - - - - - - - motile sperm domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2691]
41. aim1b 1360 0.909 - - - - - - 0.909 - - crystallin beta-gamma domain containing 1b
42. zgc:162200 ENSDARG00000079934 1225 0.904 - 0.904 - - - - - - - zgc:162200 [Source:ZFIN;Acc:ZDB-GENE-030131-2989]
43. med13b ENSDARG00000003910 1143 0.902 - - - 0.902 - - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
44. dlx6a ENSDARG00000042291 185 0.902 - 0.902 - - - - - - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
45. fam107b ENSDARG00000026865, ENSDARG00000113209, ENSDARG00000116517 861 0.901 - - - 0.901 - - - - - family with sequence similarity 107, member B [Source:ZFIN;Acc:ZDB-GENE-031030-12]
46. rfx1b ENSDARG00000075904 1175 0.898 - - - 0.898 - - - - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
47. sik2b ENSDARG00000062315 1303 0.895 - - - 0.895 - - - - - salt-inducible kinase 2b [Source:ZFIN;Acc:ZDB-GENE-071012-1]
48. parp16 ENSDARG00000018593 873 0.893 - 0.893 - - - - - - - poly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
49. adhfe1 ENSDARG00000053518 499 0.893 - - - - - - 0.893 - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
50. KRTCAP2 ENSDARG00000070386 10103 0.892 - - - - - - 0.892 - - keratinocyte associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-060825-91]
51. pcgf6 ENSDARG00000069681 2382 0.891 - - - 0.891 - - - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
52. snx33 ENSDARG00000014954 45 0.889 - 0.889 - - - - - - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
53. polh ENSDARG00000070231, ENSDARG00000111719 154 0.879 - 0.879 - - - - - - - polymerase (DNA directed), eta [Source:ZFIN;Acc:ZDB-GENE-060421-4949]
54. vps36 ENSDARG00000057021 636 0.877 - 0.877 - - - - - - - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
55. C7H7orf43 C7H7orf43 381 0.877 - 0.877 - - - - - - -
56. srp9 ENSDARG00000042851 3254 0.876 - - - - - - 0.876 - - signal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]
57. MTFMT ENSDARG00000005448 189 0.874 - 0.874 - - - - - - - mitochondrial methionyl-tRNA formyltransferase [Source:ZFIN;Acc:ZDB-GENE-060929-120]
58. si:dkey-240e12.6 ENSDARG00000110137 674 0.873 - - - - - - 0.873 - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
59. bambia ENSDARG00000055381 2922 0.873 - - - - - - 0.873 - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
60. C8H17orf59 C8H17orf59 494 0.871 - 0.871 - - - - - - -
61. osbpl11 ENSDARG00000076328 195 0.87 - 0.870 - - - - - - - oxysterol binding protein-like 11 [Source:ZFIN;Acc:ZDB-GENE-081105-135]
62. hgfa ENSDARG00000045544 225 0.87 - 0.870 - - - - - - - hepatocyte growth factor a [Source:ZFIN;Acc:ZDB-GENE-041014-2]
63. dennd2da ENSDARG00000058666 1780 0.87 - - - - - - 0.870 - - DENN/MADD domain containing 2Da [Source:ZFIN;Acc:ZDB-GENE-061013-542]
64. arpc5a ENSDARG00000039142 5482 0.869 - - - - - - 0.869 - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
65. TOB2 TOB2 254 0.869 - 0.869 - - - - - - -
66. tmem167b_1 ENSDARG00000059400 1453 0.866 - - - - - - 0.866 - - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
67. capn2l ENSDARG00000034211, ENSDARG00000111153 3858 0.866 - - - - - - 0.866 - - calpain 2, (m/II) large subunit, like [Source:ZFIN;Acc:ZDB-GENE-050417-341]
68. cwc25 ENSDARG00000003382 2134 0.866 - - - - - - 0.866 - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
69. helb ENSDARG00000053127 235 0.864 - 0.864 - - - - - - - helicase (DNA) B [Source:ZFIN;Acc:ZDB-GENE-030729-16]
70. si:ch211-269e2.1 ENSDARG00000074225 128 0.863 - - - - - - 0.863 - - si:ch211-269e2.1 [Source:ZFIN;Acc:ZDB-GENE-070912-267]
71. has3 ENSDARG00000057210, ENSDARG00000116537 108 0.863 - 0.863 - - - - - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
72. pdcd6ip ENSDARG00000025269 2522 0.861 - - - - - - 0.861 - - programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
73. atp8b1 ENSDARG00000060980 181 0.861 - 0.861 - - - - - - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
74. tra2b ENSDARG00000002168 3218 0.86 - - - 0.860 - - - - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
75. dact1 ENSDARG00000101635 1303 0.86 - - - 0.860 - - - - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
76. si:ch211-67e16.11 ENSDARG00000095580 635 0.859 - 0.859 - - - - - - - si:ch211-67e16.11 [Source:ZFIN;Acc:ZDB-GENE-030131-7044]
77. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 0.859 - - - 0.859 - - - - - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
78. agxt2 ENSDARG00000100709 799 0.858 - 0.858 - - - - - - - alanine--glyoxylate aminotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-100]
79. scamp2l ENSDARG00000017010 491 0.858 - - - - - - 0.858 - - secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
80. cisd2 ENSDARG00000052703 2841 0.858 - - - - - - 0.858 - - CDGSH iron sulfur domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1381]
81. ercc3 ENSDARG00000002402 340 0.858 - 0.858 - - - - - - - excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
82. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 0.856 - - - - - - 0.856 - - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
83. spint1b ENSDARG00000012467 97 0.856 - 0.856 - - - - - - - serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
84. ZNF335 ENSDARG00000076920 456 0.855 - 0.855 - - - - - - - zinc finger protein 335 [Source:HGNC Symbol;Acc:HGNC:15807]
85. gnai2b ENSDARG00000017294 686 0.855 - 0.855 - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
86. sypb ENSDARG00000002230 262 0.854 - 0.854 - - - - - - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
87. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 0.854 - - - 0.854 - - - - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
88. mis18a ENSDARG00000035333 555 0.853 - - - - - - 0.853 - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
89. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 0.852 - - - - - - 0.852 - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
90. cbx3b ENSDARG00000092158 1976 0.851 - 0.851 - - - - - - - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
91. vasp vasp 3925 0.851 - - - - - - 0.851 - -
92. RPH3A RPH3A 309 0.851 - 0.851 - - - - - - -
93. rrbp1a ENSDARG00000013763 4723 0.85 - - - - - - 0.850 - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
94. zgc:92061 zgc:92061 21304 0.85 - - - - - - 0.850 - -
95. emid1 ENSDARG00000076119 862 0.85 - 0.850 - - - - - - - EMI domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-40]
96. esyt3 ENSDARG00000006422 335 0.85 - 0.850 - - - - - - - extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
97. bard1 ENSDARG00000076733 40 0.85 - 0.850 - - - - - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
98. grhl1 ENSDARG00000061391 1494 0.85 - 0.850 - - - - - - - grainyhead-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3665]
99. BX649448.1 ENSDARG00000079441 65 0.849 - 0.849 - - - - - - -
100. tbc1d17 ENSDARG00000005927 1769 0.849 - - - - - - 0.849 - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]

There are 850 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA