Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for commd4

Gene Name Gene ID Reads Annotation
commd4 ENSDARG00000061946 3281 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]










Genes with expression patterns similar to commd4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. commd4 ENSDARG00000061946 3281 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
2. ash2l ENSDARG00000060392 4916 2.749 - 0.788 0.999 - 0.962 - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
3. col16a1 ENSDARG00000009194 5600 2.614 - 0.784 - - 0.978 - - - 0.852 collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
4. gpx7 ENSDARG00000091511 3045 2.394 - 0.795 - - - - 0.736 0.863 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
5. git2b ENSDARG00000042791, ENSDARG00000111846 1332 1.979 - - - - 0.994 - - - 0.985 G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
6. HPCAL1 ENSDARG00000022763 2885 1.974 - - 0.999 - - - - - 0.975 hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
7. tfdp1b ENSDARG00000016304 3071 1.972 - - 0.999 - - - - - 0.973 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
8. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.969 - - - - - - - 0.985 0.984 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
9. maf1 ENSDARG00000013122 3365 1.951 - - - - 0.984 - - - 0.967 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
10. CCDC71 CCDC71 2442 1.944 - - - - 0.977 - - - 0.967
11. cebpg ENSDARG00000036073 3791 1.943 - - - - 0.973 - - 0.970 - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
12. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.907 - - - - 0.926 - - 0.981 - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
13. frmd6 ENSDARG00000002332 2698 1.906 - - - - - - - 0.997 0.909 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
14. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.901 - - 0.998 - - - - 0.903 - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
15. sra1 ENSDARG00000053619 2799 1.894 - - - - - - - 0.918 0.976 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
16. arglu1a ENSDARG00000019223 8716 1.887 - - - - 0.954 - - 0.933 - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
17. timm10 ENSDARG00000069116 4459 1.886 - - - - 0.963 - - - 0.923 translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
18. arl14ep ENSDARG00000001210 3029 1.87 - - - - 0.981 - - - 0.889 ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
19. wipf1 wipf1 760 1.868 - - - - - 0.871 - 0.997 -
20. snrpe ENSDARG00000033175 7462 1.844 - - - - 0.980 - - - 0.864 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
21. pdcd4a ENSDARG00000021702 7293 1.829 - - - - - - - 0.924 0.905 programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
22. kazald2 ENSDARG00000078518 3062 1.82 - - 0.999 - - 0.821 - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
23. gli2b ENSDARG00000020884 1468 1.816 - - - - - 0.827 - - 0.989 GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
24. lman2 ENSDARG00000061854 6251 1.806 - - - - 0.841 - - - 0.965 lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
25. tpd52l2b ENSDARG00000013655 9460 1.796 - - - - - - - 0.897 0.899 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
26. CABZ01072607.1 ENSDARG00000113761 784 1.794 - - - - 0.991 0.803 - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
27. si:ch211-103e16.4 si:ch211-103e16.4 227 1.789 - - - - - 0.803 - - 0.986
28. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 1.781 - - - - - 0.797 - - 0.984 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
29. timmdc1 ENSDARG00000053466 2179 1.777 - - 0.999 - - 0.778 - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
30. s100v1 ENSDARG00000070427 6633 1.777 - - - - 0.948 - - 0.829 - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
31. cpsf3 ENSDARG00000027649 6897 1.776 - - - - 0.896 - - - 0.880 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
32. hsbp1b ENSDARG00000041921 6170 1.774 - - - - - 0.838 - - 0.936 heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
33. ppa1b ENSDARG00000030441 9027 1.772 - - - - 0.912 - - - 0.860 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
34. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.771 - - - - 0.914 - - 0.857 - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
35. acaa2 ENSDARG00000038881 2649 1.768 - - - - - - 0.784 0.984 - acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
36. snd1 ENSDARG00000006766 12906 1.767 - - - - - - - 0.886 0.881 staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
37. exoc3 ENSDARG00000014582, ENSDARG00000114378, ENSDARG00000117037 1155 1.76 - - - - - 0.774 - - 0.986 exocyst complex component 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5947]
38. acvr2aa ENSDARG00000011188 1454 1.752 - 0.759 - - 0.993 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
39. TRMT10A ENSDARG00000036678 621 1.752 - - - - - 0.767 - - 0.985 tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
40. mrpl12 ENSDARG00000038768 5539 1.744 0.745 - 0.999 - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
41. hmga2 ENSDARG00000069912 20402 1.738 - - 0.983 - - - - 0.755 - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
42. blzf1 ENSDARG00000011299 2568 1.731 - 0.732 0.999 - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
43. slc48a1b ENSDARG00000026109 1427 1.729 - - - - 0.992 0.737 - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
44. adnp2b ENSDARG00000028431 4683 1.726 - - - - - 0.804 - 0.922 - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
45. RPRD1A ENSDARG00000104861 2560 1.724 - 0.730 - - - - - 0.994 - regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
46. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.717 - - - - - 0.721 - 0.996 - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
47. stxbp5b ENSDARG00000029234 760 1.714 - - - - - 0.730 - - 0.984 syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
48. cdc42ep4b ENSDARG00000045036 1295 1.713 - 0.795 - - - - - - 0.918 CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
49. si:ch211-22i13.2 ENSDARG00000043485 4719 1.712 - 0.753 - - - - - - 0.959 si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
50. fastk ENSDARG00000077075 1619 1.708 - 0.733 - - - - - - 0.975 Fas-activated serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-680]
51. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.706 - 0.751 - - 0.955 - - - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
52. C18H12orf23 C18H12orf23 5362 1.705 - 0.767 - - - - - - 0.938
53. adssl1 ENSDARG00000099517 7518 1.703 - 0.746 - - 0.957 - - - - adenylosuccinate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-040516-18]
54. nap1l4b ENSDARG00000068868 3285 1.702 - 0.749 - - - - - - 0.953 nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
55. c1qtnf5 ENSDARG00000056134 729 1.693 - - - - - 0.828 - - 0.865 C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
56. capns1a ENSDARG00000035329 10870 1.693 - - - - - - - 0.924 0.769 calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
57. sf3a1 ENSDARG00000041887 6702 1.692 - - 0.972 - - 0.720 - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
58. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.69 - 0.752 - - - - - 0.938 - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
59. GPA33 2465 1.687 - - - - 0.979 0.708 - - - glycoprotein A33 (transmembrane)
60. si:ch211-10d23.5 ENSDARG00000095510 2632 1.686 - 0.718 - - - - - - 0.968 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
61. si:ch211-191j22.3 ENSDARG00000095459 959 1.686 - 0.707 - - - - - - 0.979 si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
62. arhgdia ENSDARG00000043795 14642 1.682 - - - - 0.949 - - - 0.733 Rho GDP dissociation inhibitor (GDI) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2816]
63. uhmk1 ENSDARG00000059575 1486 1.681 - 0.705 - - - - - - 0.976 U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
64. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.681 - 0.726 - - - - - 0.955 - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
65. si:ch73-110p20.1 5932 1.673 - - - - - - - 0.927 0.746 si:ch73-110p20.1
66. znf865 ENSDARG00000036698 15532 1.66 - 0.706 0.954 - - - - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
67. ddost ENSDARG00000037318 10904 1.658 - - - - - - - 0.878 0.780 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
68. zfand5b ENSDARG00000002271 4145 1.656 - 0.747 - - - - - - 0.909 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
69. vgll4b ENSDARG00000103730 5266 1.651 - - - - 0.950 0.701 - - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
70. sp3b ENSDARG00000007812 2928 1.645 - 0.778 - - - - - 0.867 - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
71. pof1b ENSDARG00000054060 2355 1.641 - - - - - 0.730 - - 0.911 POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
72. hnrpkl ENSDARG00000007034 4660 1.637 - 0.814 - - - 0.823 - - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
73. slmo2 slmo2 5559 1.634 - 0.761 - - - - - 0.873 -
74. kpna3 ENSDARG00000052641 5347 1.625 - 0.728 - - - - - - 0.897 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
75. ptbp3 ENSDARG00000043757 6760 1.623 - - - - - - 0.740 - 0.883 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
76. lsm12b ENSDARG00000109510 14459 1.604 - 0.785 - - - - - 0.819 - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
77. abracl ENSDARG00000042876 10208 1.581 - - - - - - - 0.786 0.795 ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
78. inpp5b ENSDARG00000103683 2792 1.571 - 0.838 - - - - - - 0.733 inositol polyphosphate-5-phosphatase B [Source:ZFIN;Acc:ZDB-GENE-110411-228]
79. dnajc5ab ENSDARG00000004836 2923 1.568 - 0.843 - - - - 0.725 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
80. atp5ia 4773 1.561 - - - - - 0.814 0.747 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
81. crtap ENSDARG00000018010 7722 1.559 - 0.796 - - - - - 0.763 - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
82. pl10 pl10 10795 1.54 - 0.760 - - 0.780 - - - -
83. BX649554.3 BX649554.3 949 1.513 - 0.789 - - - 0.724 - - -
84. ptenb ENSDARG00000056623 5783 1.511 - 0.720 - - - - - - 0.791 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
85. gli3 ENSDARG00000052131 986 1.51 - - - - - 0.808 0.702 - - GLI family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-041111-162]
86. timm50 ENSDARG00000031098, ENSDARG00000109900 988 1.502 0.724 - - - - 0.778 - - - translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1618]
87. stx12 ENSDARG00000098813 2576 1.498 - 0.717 - - - 0.781 - - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
88. fkbp14 ENSDARG00000040695 7725 1.489 - 0.708 - - - - - - 0.781 FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
89. fzr1 fzr1 2984 1.476 - 0.719 - - - 0.757 - - -
90. golph3 ENSDARG00000052851, ENSDARG00000109334 2114 1.455 - 0.745 - - - - 0.710 - - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
91. ercc8 ENSDARG00000069283, ENSDARG00000116263 546 1.452 - 0.732 - - - 0.720 - - - excision repair cross-complementation group 8 [Source:ZFIN;Acc:ZDB-GENE-041010-60]
92. otub1b ENSDARG00000011462 4329 1.424 - - - - - 0.720 0.704 - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
93. bdh1 ENSDARG00000059388 3390 0.999 - - 0.999 - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
94. cops2 ENSDARG00000004785 4911 0.999 - - 0.999 - - - - - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
95. si:dkey-177p2.6 ENSDARG00000042322 2783 0.999 - - 0.999 - - - - - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
96. NSMCE2 ENSDARG00000076379 2133 0.999 - - 0.999 - - - - - - NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
97. toporsb ENSDARG00000105028 1898 0.999 - - 0.999 - - - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
98. pdia3 ENSDARG00000102640 7239 0.999 - - 0.999 - - - - - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
99. mpz ENSDARG00000038609 1740 0.999 - - 0.999 - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
100. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 0.999 - - 0.999 - - - - - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]

There are 1375 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA