Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for commd3

Gene Name Gene ID Reads Annotation
commd3 ENSDARG00000045402 1601 COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]










Genes with expression patterns similar to commd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. commd3 ENSDARG00000045402 1601 8 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
2. birc5a ENSDARG00000075621 2256 3.121 - 0.858 - - - 0.769 0.792 - 0.702 baculoviral IAP repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030826-1]
3. nfu1 ENSDARG00000068125 1743 2.581 - 0.882 - - 0.995 0.704 - - - NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
4. ATG4D ATG4D 648 2.381 - 0.766 - - - 0.773 0.842 - -
5. rnf11a ENSDARG00000010442 592 1.918 - - - - 0.999 0.919 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
6. ABTB2 ABTB2 584 1.879 - 0.881 - - 0.998 - - - -
7. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 1.872 - 0.874 - - 0.998 - - - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
8. ppme1 ENSDARG00000009771 1697 1.818 - 0.824 - - 0.994 - - - - protein phosphatase methylesterase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7064]
9. foxn4 ENSDARG00000010591 2332 1.815 - 0.912 - - 0.903 - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
10. kansl3 ENSDARG00000029556 2487 1.809 - - - - 0.978 0.831 - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
11. CR387996.1 ENSDARG00000097774 3037 1.808 - - - - 0.994 0.814 - - -
12. dedd1 ENSDARG00000002758 932 1.806 - 0.932 - - - 0.874 - - - death effector domain-containing 1 [Source:ZFIN;Acc:ZDB-GENE-000616-2]
13. ndfip2 ENSDARG00000033928 3129 1.794 - - - - 0.969 - 0.825 - - Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
14. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.78 - - - - 0.997 0.783 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
15. fancd2 ENSDARG00000053574 247 1.777 - 0.872 - - - 0.905 - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
16. zgc:109744 ENSDARG00000070800 262 1.776 - 0.923 - - - 0.853 - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
17. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.772 - 0.922 - - - 0.850 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
18. prox1a ENSDARG00000055158 1411 1.764 - - - - 0.995 0.769 - - - prospero homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-397]
19. ubtf ENSDARG00000035066 4070 1.738 - - - - 0.980 0.758 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
20. rangap1a ENSDARG00000041317 1456 1.737 - 0.906 - - - 0.831 - - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
21. tmem8a ENSDARG00000032795 677 1.736 - 0.882 - - - 0.854 - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
22. orai2 ENSDARG00000035148 330 1.736 - 0.841 - - - 0.895 - - - ORAI calcium release-activated calcium modulator 2 [Source:ZFIN;Acc:ZDB-GENE-060531-127]
23. bag1 ENSDARG00000020895 1660 1.735 - 0.740 - - 0.995 - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
24. mdkb ENSDARG00000020708 5393 1.726 - - - - 0.910 0.816 - - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
25. coil ENSDARG00000040070 863 1.721 - 0.845 - - - 0.876 - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
26. slc37a2 ENSDARG00000023394 3997 1.719 - - - - 0.981 - 0.738 - - solute carrier family 37 (glucose-6-phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1949]
27. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.706 0.731 - - - 0.975 - - - - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
28. plekhg6 ENSDARG00000086056 368 1.702 - 0.897 - - - 0.805 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
29. babam1 ENSDARG00000077526 776 1.697 - 0.869 - - - 0.828 - - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
30. gltpd1 gltpd1 377 1.694 - 0.929 - - - 0.765 - - -
31. btg2 ENSDARG00000020298 6616 1.693 - 0.774 - - 0.919 - - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
32. RBM6 ENSDARG00000077060 3521 1.693 - - - - - 0.805 0.888 - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
33. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 1.693 - 0.704 - - 0.989 - - - - activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
34. FAM126B 588 1.692 - 0.805 - - - 0.887 - - - family with sequence similarity 126 member B
35. afap1 ENSDARG00000055284 730 1.686 - 0.871 - - - - 0.815 - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
36. chek1 ENSDARG00000104765 1029 1.682 - 0.937 - - - - 0.745 - - checkpoint kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-896]
37. ddx51 ENSDARG00000025854 691 1.682 - 0.867 - - - - 0.815 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Source:ZFIN;Acc:ZDB-GENE-040927-28]
38. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 1.668 - 0.923 - - - - 0.745 - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
39. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.658 - - - - 0.936 0.722 - - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
40. ptbp2b ENSDARG00000015901 2458 1.651 - 0.805 - - - 0.846 - - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
41. exoc3l4 ENSDARG00000058180 923 1.649 - 0.916 - - - 0.733 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
42. FRRS1_1 FRRS1_1 831 1.645 - 0.889 - - - 0.756 - - -
43. LIN9 ENSDARG00000028475 227 1.644 - - - - - 0.944 0.700 - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
44. polb ENSDARG00000003749 2049 1.643 - 0.802 - - - 0.841 - - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
45. ttc7b ENSDARG00000061207 710 1.638 - 0.853 - - - 0.785 - - - tetratricopeptide repeat domain 7B [Source:ZFIN;Acc:ZDB-GENE-070105-3]
46. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.634 - - - - 0.849 0.785 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
47. NUDT8 ENSDARG00000007722 329 1.628 - 0.907 - - - 0.721 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
48. rtfdc1 1792 1.626 - 0.761 - - - 0.865 - - - replication termination factor 2 domain containing 1, transcript variant X2
49. srp68 ENSDARG00000020820 1719 1.626 - - - - - 0.846 0.780 - - signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
50. lsr ENSDARG00000099291 881 1.621 - 0.865 - - - - 0.756 - - lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
51. sas sas 1783 1.62 - 0.864 - - - 0.756 - - -
52. CU633849.1 CU633849.1 590 1.607 - 0.863 - - - 0.744 - - -
53. phf3 ENSDARG00000034768 1372 1.605 - - - - - 0.807 0.798 - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
54. rnf150a ENSDARG00000024827 1903 1.599 - 0.878 - - - - 0.721 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
55. ndst3 ENSDARG00000041776 605 1.597 - - - - - 0.896 0.701 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
56. CDA 491 1.596 - - - - - 0.892 0.704 - - cytidine deaminase
57. pspc1 ENSDARG00000006621 966 1.584 - 0.724 - - - 0.860 - - - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
58. si:ch211-113e8.10 ENSDARG00000079631 498 1.578 - 0.788 - - - 0.790 - - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
59. C20H6orf211 C20H6orf211 529 1.578 - 0.757 - - - 0.821 - - -
60. CECR2 ENSDARG00000078310 903 1.574 - 0.772 - - - - 0.802 - - cat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
61. tgfbr2 tgfbr2 1117 1.571 - 0.852 - - - - 0.719 - -
62. cdc20 ENSDARG00000100741 3264 1.57 - 0.850 - - - - 0.720 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
63. tmem165 ENSDARG00000034600 1174 1.569 - 0.854 - - - 0.715 - - - transmembrane protein 165 [Source:ZFIN;Acc:ZDB-GENE-030131-3222]
64. ap2b1 ENSDARG00000035152 2912 1.567 - - - - - 0.757 0.810 - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
65. tspan2 tspan2 948 1.56 - 0.822 - - - 0.738 - - -
66. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.558 - - - - - 0.756 0.802 - - RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
67. mtx1a ENSDARG00000025500 275 1.558 - - - - - 0.821 0.737 - - metaxin 1a [Source:ZFIN;Acc:ZDB-GENE-060606-2]
68. enoph1 ENSDARG00000026198, ENSDARG00000111634, ENSDARG00000114318 1305 1.557 - 0.809 - - - 0.748 - - - enolase-phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-73]
69. zfhx4 ENSDARG00000075542 6927 1.552 - - - - 0.848 - 0.704 - - zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
70. zfand5b ENSDARG00000002271 4145 1.537 - - - - - 0.783 0.754 - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
71. fscn1a ENSDARG00000059680 3999 1.532 - 0.707 - - - 0.825 - - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
72. ube2d2l ENSDARG00000099749 1462 1.53 - 0.740 - - - 0.790 - - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
73. ptpn9b ENSDARG00000073902 755 1.52 - - - - - 0.813 - - 0.707 protein tyrosine phosphatase, non-receptor type 9, b [Source:ZFIN;Acc:ZDB-GENE-090313-52]
74. MALSU1 MALSU1 1251 1.512 - - - - - 0.739 0.773 - -
75. ddx42 ENSDARG00000037928 1659 1.507 - - - - - 0.783 0.724 - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
76. paf1 ENSDARG00000098432 1806 1.494 - - - - - - 0.750 0.744 - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
77. phf10 ENSDARG00000070084 1210 1.494 - - - - - 0.791 0.703 - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
78. bmp4 ENSDARG00000019995 2038 1.493 - - - - - 0.740 0.753 - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
79. AIFM2 ENSDARG00000077549 1419 1.486 - 0.769 - - - 0.717 - - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
80. bola1 ENSDARG00000039915 658 1.484 - 0.765 - - - 0.719 - - - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
81. tesk2 ENSDARG00000061450 261 1.483 - - - - - 0.782 - - 0.701 testis associated actin remodelling kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070209-68]
82. sgcg_1 ENSDARG00000038107 1998 1.472 - 0.739 - - - 0.733 - - - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
83. kdm4b ENSDARG00000099675 2037 1.47 - 0.741 - - - 0.729 - - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
84. ide ENSDARG00000075570 4331 1.468 - 0.712 - - - - 0.756 - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
85. pon3 pon3 1146 1.46 - 0.722 - - - - 0.738 - -
86. nkx3-1 ENSDARG00000078280 1205 1.456 - 0.730 - - - 0.726 - - - NK3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081104-238]
87. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 1.455 - - - - - 0.707 0.748 - - NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
88. mzt2b ENSDARG00000057928 629 1.429 - - - - - 0.727 - 0.702 - mitotic spindle organizing protein 2B [Source:ZFIN;Acc:ZDB-GENE-040801-87]
89. ap2m1b ENSDARG00000033899 317 1.419 - - - - - 0.712 0.707 - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
90. gga1 ENSDARG00000038537, ENSDARG00000111210 1226 1.412 0.705 - - - - - 0.707 - - golgi-associated, gamma adaptin ear containing, ARF binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040822-13]
91. rab5ab ENSDARG00000007257 1402 1.403 0.703 - - - - 0.700 - - - RAB5A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040122-3]
92. smarcal1 ENSDARG00000102265 1921 0.999 - - - - 0.999 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
93. zgc:162816 ENSDARG00000070416 974 0.999 - - - - 0.999 - - - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
94. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.999 - - - - 0.999 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
95. shisa3 ENSDARG00000075467 485 0.999 - - - - 0.999 - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
96. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.999 - - - - 0.999 - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
97. reep3l reep3l 608 0.999 - - - - 0.999 - - - -
98. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.999 - - - - 0.999 - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
99. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.999 - - - - 0.999 - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
100. foxi3a ENSDARG00000055926 749 0.999 - - - - 0.999 - - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]

There are 1963 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA