Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for colm

Gene Name Gene ID Reads Annotation
colm colm 36










Genes with expression patterns similar to colm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. colm colm 36 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. pglyrp2 ENSDARG00000062998 11 1.986 - - - - 0.986 - 1.000 - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
3. ARHGEF38 ENSDARG00000079377 9 1.958 - 0.958 - - - - 1.000 - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
4. si:dkey-103k4.5 si:dkey-103k4.5 11 1.958 - 0.958 - - - - 1.000 - -
5. KCNJ12 KCNJ12 17 1.944 - 0.958 - - 0.986 - - - -
6. ZNF337_7 ZNF337_7 198 1.87 - 0.930 - - 0.940 - - - -
7. BSN_2 BSN_2 1 1.844 - - 0.844 - - - 1.000 - -
8. DNAJC30 DNAJC30 47 1.816 - - - - - 1.000 0.816 - -
9. si:ch211-136m16.8 ENSDARG00000090767 91 1.793 - 0.958 - - - - 0.835 - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
10. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.787 - - 0.787 - - - 1.000 - - H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
11. poc5 ENSDARG00000059982 569 1.763 - 0.996 - - - 0.767 - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
12. fam5ca fam5ca 76 1.751 - - 0.800 - 0.951 - - - -
13. CMA1_8 CMA1_8 10 1.74 - - - - - 0.740 1.000 - -
14. uts1 ENSDARG00000014927 35 1.74 - - - - - 0.740 1.000 - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
15. si:ch211-219a15.3 ENSDARG00000087659 12 1.698 - 0.958 - - - 0.740 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
16. MPP3_1 MPP3_1 88 1.696 0.755 - - - 0.941 - - - -
17. si:ch211-260c23.1 13 1.689 - 0.821 - - - - 0.868 - - si:ch211-260c23.1, transcript variant X7
18. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1.685 - 0.958 - - - - 0.727 - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
19. ncam1a ENSDARG00000056181 193 1.678 - 0.726 - - - - 0.952 - - neural cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-990415-31]
20. TENM2_1 ENSDARG00000037122 67 1.663 0.705 0.958 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
21. slx4 ENSDARG00000061414, ENSDARG00000093798 44 1.657 - - - 0.717 0.940 - - - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
22. ppm1nb ENSDARG00000057032 77 1.652 0.744 - - - 0.908 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative) [Source:ZFIN;Acc:ZDB-GENE-071004-34]
23. slc16a12a ENSDARG00000017773 47 1.651 - 0.910 - - - 0.741 - - - solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
24. fam178a fam178a 29 1.62 0.768 - - - - - 0.852 - -
25. CR392001.1 ENSDARG00000095478 15 1.609 - 0.723 - - - 0.886 - - -
26. CU019646.1 ENSDARG00000117632 223 1.606 - 0.894 - - 0.712 - - - - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
27. C18H15orf48 C18H15orf48 3 1.575 - - - - - - 0.818 - 0.757
28. CR391997.1 CR391997.1 62 1.574 - - - - - 0.831 0.743 - -
29. EPHB6 ENSDARG00000057729 223 1.573 - 0.871 0.702 - - - - - - eph receptor B6 [Source:ZFIN;Acc:ZDB-GENE-100922-51]
30. ripply2 ENSDARG00000070535 18 1.561 - 0.821 - - - 0.740 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
31. FNDC3A ENSDARG00000105503 11 1.561 - 0.821 - - - 0.740 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
32. BX284672.1 BX284672.1 11 1.558 - - - - - 0.740 0.818 - -
33. slco4a1 ENSDARG00000075948 74 1.555 - - - - 0.822 - - - 0.733 solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
34. rsph3 ENSDARG00000043470 74 1.547 - - - - 0.737 0.810 - - - radial spoke head 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040724-173]
35. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.515 0.768 - - - - - 0.747 - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
36. LPHN1_1 LPHN1_1 7 1.514 - - 0.789 - - - - - 0.725
37. GALNT9 ENSDARG00000006832 120 1.508 0.768 - - - - - 0.740 - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
38. asb16 ENSDARG00000056468, ENSDARG00000110292 126 1.507 0.739 0.768 - - - - - - - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
39. ndufaf1 ENSDARG00000025549 42 1.501 0.728 - - - - - 0.773 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]
40. NOX4 3 1.497 - - - - - 0.740 - - 0.757 NADPH oxidase 4
41. tubd1 ENSDARG00000058219, ENSDARG00000110746 47 1.49 - 0.763 - - - - 0.727 - - tubulin, delta 1 [Source:ZFIN;Acc:ZDB-GENE-040625-73]
42. cpne5 cpne5 16 1.489 0.768 - - - - - - - 0.721
43. jazf1a ENSDARG00000102551 767 1.481 - 0.718 - - 0.763 - - - - JAZF zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-060503-492]
44. unc119a ENSDARG00000034453 244 1.471 - 0.704 - - 0.767 - - - - unc-119 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090930-2]
45. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - - - - 1.000 - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
46. si:ch73-15n24.1 ENSDARG00000079901 0 1 - - - - - - 1.000 - - si:ch73-15n24.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1323]
47. CR854827.2 ENSDARG00000097227 15 1 - - - - - - 1.000 - -
48. kcne4 ENSDARG00000068257 13 1 - - - - - - 1.000 - - potassium voltage-gated channel, Isk-related family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050419-163]
49. ompa ENSDARG00000105218 3 1 - - - - - - 1.000 - - olfactory marker protein a [Source:ZFIN;Acc:ZDB-GENE-050626-118]
50. pax6l pax6l 54 1 - - - - - - 1.000 - -
51. fgf8b ENSDARG00000039615 29 1 - - - - - - 1.000 - - fibroblast growth factor 8 b [Source:ZFIN;Acc:ZDB-GENE-010122-1]
52. tmem244 ENSDARG00000043847 3 1 - - - - - - 1.000 - - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
53. gcgb ENSDARG00000040907 182 1 - - - - - - 1.000 - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
54. BX547934.1 ENSDARG00000097061 35 1 - - - - - - 1.000 - -
55. CR382281.1 ENSDARG00000100098 135 1 - - - - - - 1.000 - -
56. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - - - - 1.000 - -
57. CABZ01065246.2 CABZ01065246.2 45 1 - - - - - - 1.000 - -
58. tnfsf11 ENSDARG00000068141 0 1 - - - - - - 1.000 - - TNF superfamily member 11 [Source:ZFIN;Acc:ZDB-GENE-090805-2]
59. neurod6a ENSDARG00000040008 17 1 - - - - - - 1.000 - - neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
60. arnt ENSDARG00000021855, ENSDARG00000115999 32 1 - - - - - - 1.000 - - aryl hydrocarbon receptor nuclear translocator [Source:ZFIN;Acc:ZDB-GENE-060126-7]
61. scospondin ENSDARG00000067859 4 1 - - - - - - 1.000 - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
62. cdh15 ENSDARG00000068191, ENSDARG00000112512, ENSDARG00000116974 121 1 - - - - - - 1.000 - - cadherin 15, type 1, M-cadherin (myotubule) [Source:ZFIN;Acc:ZDB-GENE-030131-780]
63. ccdc172 ENSDARG00000039937 1 1 - - - - - - 1.000 - - coiled-coil domain containing 172 [Source:ZFIN;Acc:ZDB-GENE-090313-1]
64. agtr1b ENSDARG00000045443 232 1 - - - - - - 1.000 - - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
65. PTPDC1_1 PTPDC1_1 12 1 - - - - - - 1.000 - -
66. si:dkey-220o10.1 si:dkey-220o10.1 63 1 - - - - - - 1.000 - -
67. C11H1orf116 C11H1orf116 9 1 - - - - - - 1.000 - -
68. olfcq19 ENSDARG00000068566 0 1 - - - - - - 1.000 - - olfactory receptor C family, q19 [Source:ZFIN;Acc:ZDB-GENE-070705-283]
69. ft2 ENSDARG00000109567 5 1 - - - - - - 1.000 - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
70. ext1c ENSDARG00000035649 0 1 - - - - - - 1.000 - - exostoses (multiple) 1c [Source:ZFIN;Acc:ZDB-GENE-050211-5]
71. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - - - - 1.000 - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
72. ERBB4 ERBB4 1 1 - - - - - - 1.000 - -
73. zgc:113355 zgc:113355 2 1 - - - - - - 1.000 - -
74. UBASH3B_1 UBASH3B_1 28 1 - - - - - - 1.000 - -
75. CCDC141 ENSDARG00000095675 94 1 - - - - - - 1.000 - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
76. SLC5A10 ENSDARG00000074212 11 1 - - - - - - 1.000 - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
77. CU467828.1 CU467828.1 0 1 - - - - - - 1.000 - -
78. tdrd9 ENSDARG00000013453 22 1 - - - - - - 1.000 - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
79. si:ch73-299h12.1_1 ENSDARG00000102321 8 1 - - - - - - 1.000 - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
80. CDR2_1 CDR2_1 8 1 - - - - - - 1.000 - -
81. si:ch211-207c6.14 si:ch211-207c6.14 19 1 - - - - - - 1.000 - -
82. si:dkey-88n24.8 ENSDARG00000091095 9 1 - - - - - - 1.000 - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
83. frmd7 ENSDARG00000068958 1 1 - - - - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
84. kcnq1 ENSDARG00000059798 11 1 - - - - - - 1.000 - - potassium voltage-gated channel, KQT-like subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-061214-5]
85. serpinf2a ENSDARG00000076448 4 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2a [Source:ZFIN;Acc:ZDB-GENE-060822-1]
86. CT737138.1 CT737138.1 26 1 - - - - - - 1.000 - -
87. FP074874.2 ENSDARG00000105724 107 1 - - - - - - 1.000 - -
88. olfcd1 ENSDARG00000008095 2 1 - - - - - - 1.000 - - olfactory receptor C family, d1 [Source:ZFIN;Acc:ZDB-GENE-100721-9]
89. xcr1a xcr1a 3 1 - - - - - - 1.000 - -
90. kif26bb ENSDARG00000024575 18 1 - - - - - - 1.000 - - kinesin family member 26Bb [Source:ZFIN;Acc:ZDB-GENE-041001-188]
91. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - - - - - - 1.000 - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
92. CABZ01041769.3 CABZ01041769.3 5 1 - - - - - - 1.000 - -
93. si:dkey-89j23.3 si:dkey-89j23.3 9 1 - - - - - - 1.000 - -
94. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - 1.000 - -
95. CLTCL1 ENSDARG00000091618 0 1 - - - - - - 1.000 - - clathrin, heavy chain-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1029]
96. crp1 ENSDARG00000071454 31 1 - - - - - - 1.000 - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]
97. C2CD4C_1 C2CD4C_1 24 1 - - - - - - 1.000 - -
98. olfcg9 ENSDARG00000105189 1 1 - - - - - - 1.000 - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
99. si:ch211-238p8.1 si:ch211-238p8.1 1 1 - - - - - - 1.000 - -
100. THAP6 THAP6 57 1 1.000 - - - - - - - -

There are 1170 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA