Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for colec12

Gene Name Gene ID Reads Annotation
colec12 ENSDARG00000061140 1323 collectin sub-family member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9807]










Genes with expression patterns similar to colec12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. colec12 ENSDARG00000061140 1323 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collectin sub-family member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9807]
2. gdnfa ENSDARG00000039959 345 2.443 - 0.771 - - - 0.885 0.787 - - glial cell derived neurotrophic factor a [Source:ZFIN;Acc:ZDB-GENE-010226-1]
3. zgc:92242 ENSDARG00000029443 367 1.641 - - - 0.807 - 0.834 - - - zgc:92242 [Source:ZFIN;Acc:ZDB-GENE-040718-371]
4. sorbs1 ENSDARG00000103435 2297 1.619 - - - 0.810 - - 0.809 - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
5. DHX29 ENSDARG00000040326 431 1.614 - 0.834 - - - - 0.780 - - DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Source:ZFIN;Acc:ZDB-GENE-130530-606]
6. yipf2 ENSDARG00000021399 702 1.612 - - - 0.790 - 0.822 - - - Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
7. cdc23 ENSDARG00000044484 767 1.603 - 0.856 - - - 0.747 - - - CDC23 (cell division cycle 23, yeast, homolog) [Source:ZFIN;Acc:ZDB-GENE-040426-866]
8. si:ch211-212k5.2 si:ch211-212k5.2 152 1.599 - - - 0.809 - 0.790 - - -
9. SLC5A6 SLC5A6 179 1.597 - - - 0.824 - 0.773 - - -
10. si:dkey-261h17.1 ENSDARG00000095268 11403 1.579 0.765 - - - - - 0.814 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
11. zgc:174178 zgc:174178 104 1.575 - - - 0.794 - 0.781 - - -
12. ppp1r26 ENSDARG00000102891 486 1.574 - 0.798 - 0.776 - - - - - protein phosphatase 1, regulatory subunit 26 [Source:ZFIN;Acc:ZDB-GENE-061103-607]
13. si:dkey-14k9.3 ENSDARG00000045595 256 1.572 - - - 0.841 - 0.731 - - - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
14. nanos1 ENSDARG00000109337 2494 1.564 0.776 - - - - - 0.788 - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
15. fam198b ENSDARG00000077054 98 1.559 - - - 0.828 - - 0.731 - - family with sequence similarity 198, member B [Source:ZFIN;Acc:ZDB-GENE-100105-1]
16. col4a1 ENSDARG00000055009 3083 1.558 0.824 - - - - - 0.734 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
17. efhd1 ENSDARG00000043446 703 1.549 - - - 0.841 - 0.708 - - - EF-hand domain family, member D1 [Source:ZFIN;Acc:ZDB-GENE-030131-7461]
18. usp25 ENSDARG00000012314 734 1.546 - 0.709 - 0.837 - - - - - ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]
19. C13H20orf194 C13H20orf194 580 1.541 - - - 0.820 - - 0.721 - -
20. RIN3 ENSDARG00000077618 745 1.54 - 0.738 - - - - 0.802 - - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
21. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 1.539 - 0.734 - - - 0.805 - - - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
22. fam49bb ENSDARG00000045417 513 1.539 - 0.741 - 0.798 - - - - - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
23. srxn1 ENSDARG00000079160 265 1.52 - 0.747 - 0.773 - - - - - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
24. eif4e3 ENSDARG00000005078 1624 1.52 - - - 0.812 - 0.708 - - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
25. dynlt3 ENSDARG00000046132 1054 1.507 - 0.745 - - - 0.762 - - - dynein, light chain, Tctex-type 3 [Source:ZFIN;Acc:ZDB-GENE-040927-24]
26. appbp2 ENSDARG00000007566 1961 1.506 - - - 0.710 - 0.796 - - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
27. aip ENSDARG00000104437 3574 1.505 - 0.784 - - - - 0.721 - - aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
28. SNORD27 SNORD27 181 1.492 - - - 0.787 - 0.705 - - -
29. immp2l ENSDARG00000004925 215 1.48 - - - - - 0.732 0.748 - - inner mitochondrial membrane peptidase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040808-9]
30. si:dkey-66i24.9 ENSDARG00000096689 796 1.48 - - - 0.753 - 0.727 - - - si:dkey-66i24.9 [Source:ZFIN;Acc:ZDB-GENE-130531-63]
31. myclb ENSDARG00000034956, ENSDARG00000110185 1466 1.469 - - - 0.766 - 0.703 - - - MYCL proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-5561]
32. arrdc1a ENSDARG00000068148 511 1.467 - - - 0.761 - 0.706 - - - arrestin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030925-15]
33. SLC17A7 SLC17A7 1226 1.453 0.743 0.710 - - - - - - -
34. si:ch73-389k6.1 ENSDARG00000103186 296 1.434 - 0.716 - - - - 0.718 - - si:ch73-389k6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-408]
35. POLD4 POLD4 626 1.412 - 0.701 - - - 0.711 - - -
36. amotl2b ENSDARG00000061948 974 1.408 - 0.707 - - - 0.701 - - - angiomotin like 2b [Source:ZFIN;Acc:ZDB-GENE-061103-307]
37. tmem161b ENSDARG00000055989 680 0.913 - - - - - - 0.913 - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
38. zgc:154075 ENSDARG00000067630 284 0.912 - - - - - 0.912 - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
39. s1pr5a ENSDARG00000040526 923 0.909 - - - - - 0.909 - - - sphingosine-1-phosphate receptor 5a [Source:ZFIN;Acc:ZDB-GENE-041114-188]
40. obscn obscn 146 0.895 - - - - - 0.895 - - -
41. ptk7a ENSDARG00000011863 450 0.889 - - - - - 0.889 - - - protein tyrosine kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050522-216]
42. smc4 ENSDARG00000038882 4373 0.881 - - - - - 0.881 - - - structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
43. znf511 ENSDARG00000000760 446 0.881 - - - - - 0.881 - - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
44. TCIRG1 TCIRG1 875 0.88 - - - - - 0.880 - - -
45. kdm5bb ENSDARG00000003098 531 0.879 - - - - - 0.879 - - - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
46. si:dkey-11f4.16 ENSDARG00000099799 121 0.877 - - - - - 0.877 - - - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
47. tnfsf13b ENSDARG00000012945 54 0.874 - - - - - 0.874 - - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
48. lrig2 ENSDARG00000078561, ENSDARG00000116750 2559 0.874 - 0.874 - - - - - - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-041111-75]
49. si:ch211-203c7.2 si:ch211-203c7.2 885 0.873 - - - - - 0.873 - - -
50. ap1m3 ENSDARG00000039512, ENSDARG00000113914, ENSDARG00000116700 647 0.872 - - - 0.872 - - - - - adaptor related protein complex 1 subunit mu 3 [Source:ZFIN;Acc:ZDB-GENE-040801-159]
51. gtf2h2 ENSDARG00000016514 380 0.87 - 0.870 - - - - - - - general transcription factor IIH, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1959]
52. slu7 ENSDARG00000038870 1311 0.869 - - - - - 0.869 - - - SLU7 homolog, splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-62]
53. bmp7b ENSDARG00000063230 337 0.866 - - - - - 0.866 - - - bone morphogenetic protein 7b [Source:ZFIN;Acc:ZDB-GENE-060929-328]
54. ormdl2 ENSDARG00000058022 1146 0.86 - - - 0.860 - - - - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
55. hsd17b10 ENSDARG00000017781 1793 0.859 - - - - - - 0.859 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
56. rybpb ENSDARG00000053459 1464 0.859 - - - 0.859 - - - - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
57. calhm2 ENSDARG00000039482 138 0.858 - - - 0.858 - - - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
58. zgc:198419 ENSDARG00000076221 156 0.858 - - - - - 0.858 - - - zgc:198419 [Source:ZFIN;Acc:ZDB-GENE-030131-7540]
59. dio3b ENSDARG00000095767 521 0.856 - - - - - 0.856 - - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
60. NDNF ENSDARG00000062936 7287 0.855 - - - - - - 0.855 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
61. inpp5f ENSDARG00000061437 1228 0.854 - - - - - 0.854 - - - inositol polyphosphate-5-phosphatase F [Source:ZFIN;Acc:ZDB-GENE-041111-194]
62. pnpla7b ENSDARG00000040002 1217 0.852 - - - - - 0.852 - - - patatin-like phospholipase domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-050309-66]
63. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.851 - - - 0.851 - - - - - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
64. fam84a ENSDARG00000018921 375 0.851 - - - 0.851 - - - - - family with sequence similarity 84, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1247]
65. skia ENSDARG00000042151 1850 0.851 - - - 0.851 - - - - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
66. SGPP1 ENSDARG00000060534 1802 0.85 - - - - - 0.850 - - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
67. olfml3a ENSDARG00000061852 139 0.849 - - - 0.849 - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
68. ANKRD6 ANKRD6 73 0.847 - - - 0.847 - - - - -
69. si:ch211-120e1.6 si:ch211-120e1.6 292 0.847 - - - 0.847 - - - - -
70. phrf1 ENSDARG00000075252 1982 0.846 - 0.846 - - - - - - - PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
71. XCR1_1 XCR1_1 187 0.846 - - - - - 0.846 - - -
72. znf362 znf362 869 0.846 - - - - - 0.846 - - -
73. kdrl ENSDARG00000105215 766 0.846 - - - - - - 0.846 - - kinase insert domain receptor like [Source:ZFIN;Acc:ZDB-GENE-000705-1]
74. mms19 ENSDARG00000079067 65 0.846 - - - 0.846 - - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
75. foxo1a ENSDARG00000099555 288 0.846 - - - 0.846 - - - - - forkhead box O1 a [Source:ZFIN;Acc:ZDB-GENE-061013-59]
76. SLITRK6 ENSDARG00000098769 217 0.845 - - - 0.845 - - - - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
77. IL17RA_1 IL17RA_1 39 0.845 - - - 0.845 - - - - -
78. pipox ENSDARG00000055591 260 0.845 - - - - - 0.845 - - - pipecolic acid oxidase [Source:ZFIN;Acc:ZDB-GENE-110627-2]
79. grap2b ENSDARG00000101169 58 0.845 - - - 0.845 - - - - - GRB2 related adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1485]
80. dnajb1b ENSDARG00000041394 25 0.845 - - - 0.845 - - - - - DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
81. slc34a1a ENSDARG00000028824 35 0.845 - - - 0.845 - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
82. tmprss2 ENSDARG00000098686 251 0.845 - - - - - 0.845 - - - transmembrane serine protease 2 [Source:ZFIN;Acc:ZDB-GENE-041212-48]
83. egfl7 ENSDARG00000100657 776 0.843 - - - - - - 0.843 - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
84. si:dkey-71b5.9 si:dkey-71b5.9 398 0.843 - - - - - 0.843 - - -
85. creld2 ENSDARG00000029071, ENSDARG00000116264 333 0.843 - - - 0.843 - - - - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
86. C17H15orf52 244 0.842 - - - 0.842 - - - - - chromosome 17 C15orf52 homolog, transcript variant X3
87. srrm2 ENSDARG00000037965 1967 0.842 - - - - - 0.842 - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
88. zgc:165518 ENSDARG00000075737 35 0.842 - - - 0.842 - - - - - zgc:165518 [Source:ZFIN;Acc:ZDB-GENE-070720-15]
89. ddx56 ENSDARG00000020913 1070 0.842 - - - 0.842 - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
90. CABZ01088509.1 CABZ01088509.1 1213 0.842 - - - - - 0.842 - - -
91. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 0.842 - - - - - 0.842 - - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
92. ntf7 ntf7 72 0.841 - - - 0.841 - - - - -
93. rnf11b ENSDARG00000040635 242 0.841 - - - 0.841 - - - - - ring finger protein 11b [Source:ZFIN;Acc:ZDB-GENE-050913-69]
94. CR361561.3 CR361561.3 91 0.841 - - - 0.841 - - - - -
95. lrp5 ENSDARG00000006921 3522 0.841 0.841 - - - - - - - - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
96. VASH1 ENSDARG00000092716 33 0.841 - - - 0.841 - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
97. gtpbp4 ENSDARG00000018961 5323 0.84 - - - - - - 0.840 - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
98. cep44 ENSDARG00000053106 683 0.84 - - - - - 0.840 - - - centrosomal protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-392]
99. gucd1 ENSDARG00000068438, ENSDARG00000111855 438 0.84 - - - - - 0.840 - - - guanylyl cyclase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-872]
100. CNNM2 CNNM2 225 0.839 - - - - - 0.839 - - -

There are 1282 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA