Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for colec11

Gene Name Gene ID Reads Annotation
colec11 ENSDARG00000013266 139 collectin sub-family member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-11]










Genes with expression patterns similar to colec11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. colec11 ENSDARG00000013266 139 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collectin sub-family member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-11]
2. foxf1 ENSDARG00000015399 205 1.524 - - - - - 0.777 - 0.747 - forkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
3. arrdc1a ENSDARG00000068148 511 1.52 - - - - - 0.796 0.724 - - arrestin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030925-15]
4. lcp1 ENSDARG00000023188 298 1.494 - - - - - 0.761 0.733 - - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
5. si:ch211-253p2.2 ENSDARG00000071772 64 1.454 - - - - - - 0.753 0.701 - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
6. oprk1 ENSDARG00000006894 43 1.453 - - - - - 0.717 0.736 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
7. si:dkeyp-72e1.7 ENSDARG00000104457 169 1.444 - - - - - 0.714 0.730 - - si:dkeyp-72e1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-229]
8. CABZ01088509.1 CABZ01088509.1 1213 1.415 - - - - - 0.715 0.700 - -
9. a1cf ENSDARG00000002968 284 0.949 - - - - - - 0.949 - - apobec1 complementation factor [Source:ZFIN;Acc:ZDB-GENE-060824-3]
10. piga ENSDARG00000041040 267 0.942 - - - - - - 0.942 - - phosphatidylinositol glycan anchor biosynthesis, class A [Source:ZFIN;Acc:ZDB-GENE-040426-1086]
11. cbx7a ENSDARG00000038025 106 0.926 - - - - - 0.926 - - - chromobox homolog 7a [Source:ZFIN;Acc:ZDB-GENE-050417-400]
12. cpb2 ENSDARG00000037144, ENSDARG00000113001 158 0.902 - - - - - 0.902 - - - carboxypeptidase B2 (plasma) [Source:ZFIN;Acc:ZDB-GENE-050522-259]
13. CDC42EP1_1 CDC42EP1_1 449 0.894 - - - - - 0.894 - - -
14. smc4 ENSDARG00000038882 4373 0.891 - - - - - 0.891 - - - structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
15. s1pr5a ENSDARG00000040526 923 0.879 - - - - - 0.879 - - - sphingosine-1-phosphate receptor 5a [Source:ZFIN;Acc:ZDB-GENE-041114-188]
16. idua ENSDARG00000062904 105 0.861 - - - - - - 0.861 - - iduronidase, alpha-L- [Source:ZFIN;Acc:ZDB-GENE-060526-29]
17. TMEM179B ENSDARG00000069495 1074 0.856 - - - - - 0.856 - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
18. dio3b ENSDARG00000095767 521 0.846 - - - - - 0.846 - - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
19. ada ENSDARG00000003113 228 0.845 - - - - - - 0.845 - - adenosine deaminase [Source:ZFIN;Acc:ZDB-GENE-040718-393]
20. si:dkey-11f4.16 ENSDARG00000099799 121 0.84 - - - - - 0.840 - - - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
21. colec12 ENSDARG00000061140 1323 0.838 - - - - - 0.838 - - - collectin sub-family member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9807]
22. bloc1s1 ENSDARG00000014171 597 0.836 - - - - - 0.836 - - - biogenesis of lysosomal organelles complex-1, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050208-569]
23. CYP27A1_1 CYP27A1_1 329 0.835 - - - - - 0.835 - - -
24. CU468142.1 CU468142.1 6 0.834 - - - - 0.834 - - - -
25. mir21-1 606 0.833 - - - - - 0.833 - - - microRNA 21-1
26. zgc:154075 ENSDARG00000067630 284 0.832 - - - - - 0.832 - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
27. soat1 ENSDARG00000062297 71 0.828 - - - - - 0.828 - - - sterol O-acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-177]
28. HEG1 ENSDARG00000018441 117 0.827 - - - - - - 0.827 - - heart development protein with EGF-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-040714-1]
29. plbd1 ENSDARG00000063313 2842 0.826 - - - - - 0.826 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
30. bmp7b ENSDARG00000063230 337 0.825 - - - - - 0.825 - - - bone morphogenetic protein 7b [Source:ZFIN;Acc:ZDB-GENE-060929-328]
31. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.824 - - - - - 0.824 - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
32. BAD BAD 1322 0.822 - - - - - 0.822 - - -
33. tcf21 ENSDARG00000036869, ENSDARG00000111209 37 0.822 - - - - - - - - 0.822 transcription factor 21 [Source:ZFIN;Acc:ZDB-GENE-051113-88]
34. stambpl1 ENSDARG00000003085 665 0.817 - - - - - - 0.817 - - STAM binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-100215-4]
35. s100a10a ENSDARG00000037425 237 0.817 - - - - - - 0.817 - - S100 calcium binding protein A10a [Source:ZFIN;Acc:ZDB-GENE-041010-35]
36. tmem194a tmem194a 745 0.816 - - - - - - 0.816 - -
37. ndrg1a ENSDARG00000032849 2406 0.815 - - - - - 0.815 - - - N-myc downstream regulated 1a [Source:ZFIN;Acc:ZDB-GENE-030826-34]
38. PEG3_38 PEG3_38 521 0.814 - - - - - 0.814 - - -
39. ptk7a ENSDARG00000011863 450 0.813 - - - - - 0.813 - - - protein tyrosine kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050522-216]
40. il6r ENSDARG00000104474 150 0.813 - - - - - 0.813 - - - interleukin 6 receptor [Source:ZFIN;Acc:ZDB-GENE-080107-7]
41. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 0.813 - - 0.813 - - - - - - homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
42. tfap2d ENSDARG00000023272 308 0.813 - - 0.813 - - - - - - transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
43. si:dkey-6n3.3 si:dkey-6n3.3 9 0.812 - - - - - - 0.812 - -
44. angpt2b ENSDARG00000053906 19 0.809 - - 0.809 - - - - - - angiopoietin 2b [Source:ZFIN;Acc:ZDB-GENE-010817-2]
45. zyx ENSDARG00000075733 429 0.809 - - - - - 0.809 - - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
46. zgc:162913 zgc:162913 155 0.808 - - - - - 0.808 - - -
47. dusp2 ENSDARG00000098108 353 0.804 - - - - - 0.804 - - - dual specificity phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-188]
48. RBBP8NL RBBP8NL 813 0.803 - - - - - 0.803 - - -
49. irx7 ENSDARG00000002601 72 0.802 - - 0.802 - - - - - - iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
50. ubtd2 ENSDARG00000069184, ENSDARG00000109249 1658 0.801 - - - - - 0.801 - - - ubiquitin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-473]
51. zgc:172131 ENSDARG00000076269 32 0.8 - - - - - 0.800 - - - zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
52. CEP170B ENSDARG00000074636 336 0.798 - - - - - - 0.798 - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
53. col12a1a ENSDARG00000078322 1833 0.798 - - - - - 0.798 - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
54. atp6v0a1a ENSDARG00000020847 1250 0.797 - - - - - - 0.797 - - ATPase H+ transporting V0 subunit a1a [Source:ZFIN;Acc:ZDB-GENE-030131-3027]
55. Mar-03 Mar-03 44 0.796 - - - - 0.796 - - - -
56. si:ch211-255g12.9 si:ch211-255g12.9 78 0.795 - - - - - 0.795 - - -
57. MED9 ENSDARG00000096631 755 0.795 - - - - - - 0.795 - - mediator complex subunit 9 [Source:HGNC Symbol;Acc:HGNC:25487]
58. sik2a ENSDARG00000079618, ENSDARG00000115529 65 0.794 - - - - - 0.794 - - - salt-inducible kinase 2a [Source:ZFIN;Acc:ZDB-GENE-070705-451]
59. mfsd11 ENSDARG00000102828 1043 0.794 - - - - - 0.794 - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
60. si:ch211-203c7.2 si:ch211-203c7.2 885 0.793 - - - - - 0.793 - - -
61. pcdh15a ENSDARG00000098257 103 0.793 - - - - - - 0.793 - - protocadherin-related 15a [Source:ZFIN;Acc:ZDB-GENE-030616-3]
62. zgc:198419 ENSDARG00000076221 156 0.792 - - - - - 0.792 - - - zgc:198419 [Source:ZFIN;Acc:ZDB-GENE-030131-7540]
63. hand2 ENSDARG00000008305 1214 0.792 - - - - - 0.792 - - - heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
64. ypel3 ENSDARG00000055510 1344 0.792 - - - - - - 0.792 - - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
65. st3gal3b ENSDARG00000015252 465 0.789 - - - - - 0.789 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-050411-13]
66. esrrgb ENSDARG00000011696 108 0.787 - - - - - - 0.787 - - estrogen-related receptor gamma b [Source:ZFIN;Acc:ZDB-GENE-040616-4]
67. pipox ENSDARG00000055591 260 0.786 - - - - - 0.786 - - - pipecolic acid oxidase [Source:ZFIN;Acc:ZDB-GENE-110627-2]
68. CR848814.2 CR848814.2 19 0.785 - - - - - - 0.785 - -
69. casp7 ENSDARG00000091836 657 0.784 - - - - - 0.784 - - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
70. txlng ENSDARG00000001969 7 0.784 - - 0.784 - - - - - - taxilin gamma [Source:ZFIN;Acc:ZDB-GENE-060616-122]
71. CABZ01054962.1 CABZ01054962.1 91 0.783 - - - - - 0.783 - - -
72. nt5dc2 ENSDARG00000059646 3878 0.783 - - - - - 0.783 - - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
73. slc39a5 ENSDARG00000079525 2157 0.781 - - - - - 0.781 - - - solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
74. CMA1_5 CMA1_5 1 0.78 - - 0.780 - - - - - -
75. creg1 ENSDARG00000105154 843 0.78 - - - - - - 0.780 - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
76. alox5 alox5 406 0.779 - - - - - 0.779 - - -
77. obscn obscn 146 0.778 - - - - - 0.778 - - -
78. mical2b ENSDARG00000020395 470 0.778 - - - - - - 0.778 - - microtubule associated monooxygenase, calponin and LIM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-061207-15]
79. TCIRG1 TCIRG1 875 0.776 - - - - - 0.776 - - -
80. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 0.776 - - - - - 0.776 - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
81. kdm5bb ENSDARG00000003098 531 0.776 - - - - - 0.776 - - - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
82. gdnfa ENSDARG00000039959 345 0.776 - - - - - 0.776 - - - glial cell derived neurotrophic factor a [Source:ZFIN;Acc:ZDB-GENE-010226-1]
83. TTF1_1 TTF1_1 299 0.775 - - - - - - 0.775 - -
84. nkiras1 ENSDARG00000099527 277 0.775 - - - - - 0.775 - - - NFKB inhibitor interacting Ras-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-215]
85. PAK6 PAK6 5 0.774 - - - - - - - - 0.774
86. EPS8L3 EPS8L3 111 0.774 - - - - - 0.774 - - -
87. POLD4 POLD4 626 0.774 - - - - - 0.774 - - -
88. RBM47 ENSDARG00000061985 2498 0.774 - - - - - 0.774 - - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
89. si:ch211-57i17.2 ENSDARG00000093354 58 0.774 - - - - - - - - 0.774 si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
90. tnfsf13b ENSDARG00000012945 54 0.774 - - - - - 0.774 - - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
91. si:ch211-59m15.2 si:ch211-59m15.2 3 0.774 - - - - - - - - 0.774
92. galnt12 ENSDARG00000055490 1653 0.772 - - - - - 0.772 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
93. ppargc1a ENSDARG00000067829 772 0.771 - - - - - 0.771 - - - peroxisome proliferator-activated receptor gamma, coactivator 1 alpha [Source:ZFIN;Acc:ZDB-GENE-080505-1]
94. fam102ab ENSDARG00000016866, ENSDARG00000113063 1080 0.77 - - - - - 0.770 - - - family with sequence similarity 102, member Ab [Source:ZFIN;Acc:ZDB-GENE-060929-412]
95. cxxc1l cxxc1l 1035 0.769 - - - - - 0.769 - - -
96. si:ch211-179l5.5 si:ch211-179l5.5 249 0.769 - - - - - 0.769 - - -
97. cpa5 ENSDARG00000021339 61 0.768 - - - - - 0.768 - - - carboxypeptidase A5 [Source:ZFIN;Acc:ZDB-GENE-020514-1]
98. foxl2 61 0.768 - - 0.768 - - - - - - forkhead box L2, transcript variant X1
99. si:ch211-284e13.5 ENSDARG00000094725 68 0.768 - - - - - - 0.768 - - si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
100. fbxo42 ENSDARG00000087545 262 0.768 - - - - - 0.768 - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]

There are 372 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA