Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col9a1

Gene Name Gene ID Reads Annotation
col9a1 col9a1 34481










Genes with expression patterns similar to col9a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col9a1 col9a1 34481 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 3.28 0.843 - - 0.782 - 0.911 - 0.744 - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
3. CABZ01079764.1 CABZ01079764.1 12103 3.133 0.737 - - 0.726 - 0.884 - 0.786 -
4. cmn ENSDARG00000055527 14039 3.037 0.849 - 0.721 0.709 - 0.758 - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
5. col9a2 ENSDARG00000024492 20234 2.582 0.843 - 0.792 - - 0.947 - - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
6. col2a1a ENSDARG00000069093, ENSDARG00000111202 50276 2.58 0.918 - - 0.751 - 0.911 - - - collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
7. CABZ01044297.1 CABZ01044297.1 2015 2.479 0.805 - - - - 0.910 - 0.764 -
8. col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 2.327 0.775 - - - - 0.839 0.713 - - collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
9. tmem38a ENSDARG00000024047 41883 2.303 0.736 - 0.859 - - - - 0.708 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
10. tmem182 tmem182 12589 2.289 - - 0.758 - 0.794 - - 0.737 -
11. plod2 ENSDARG00000011821 1656 2.28 0.731 - 0.708 - - 0.841 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
12. hoxb9a ENSDARG00000056023 11856 2.278 - - 0.716 - - - - 0.752 0.810 homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
13. myl10 ENSDARG00000062592 101207 2.254 - - 0.755 0.767 - - - 0.732 - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
14. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 2.251 - 0.707 - 0.738 - - - 0.806 - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
15. zgc:66286 zgc:66286 118947 2.18 0.744 - 0.716 - - - - 0.720 -
16. col9a3 ENSDARG00000037845 6564 1.744 0.828 - - - - 0.916 - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
17. epyc ENSDARG00000056950 7783 1.709 0.820 - - - - 0.889 - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
18. si:dkeyp-12a9.5 3058 1.687 0.804 - - - - 0.883 - - - si:dkeyp-12a9.5
19. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 1.658 - - 0.817 - - - - 0.841 - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
20. PAQR4 PAQR4 2150 1.655 0.783 - - - - 0.872 - - -
21. ntla ntla 926 1.653 0.756 - - - - 0.897 - - -
22. tnnc1b ENSDARG00000037539 13945 1.63 - - 0.809 0.821 - - - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
23. pi15a ENSDARG00000045378 2361 1.629 0.756 - - - - 0.873 - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
24. ntd5 ENSDARG00000040944 4988 1.624 0.818 - - - - 0.806 - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
25. klhl41b ENSDARG00000006757 10762 1.619 - - 0.863 0.756 - - - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
26. tnni2b.1 ENSDARG00000035958 51597 1.605 - - 0.882 - - - 0.723 - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
27. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.603 0.784 - - - - 0.819 - - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
28. desma ENSDARG00000058656 30292 1.596 0.802 - 0.794 - - - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
29. ucmab ENSDARG00000005485 1808 1.588 0.708 - - - - 0.880 - - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
30. tgfbi ENSDARG00000071586 17779 1.579 0.758 - - - - 0.821 - - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
31. susd5 ENSDARG00000088277 439 1.568 0.713 - - - - 0.855 - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
32. postnb ENSDARG00000104267 28076 1.563 - - - 0.705 - - - - 0.858 periostin, osteoblast specific factor b [Source:ZFIN;Acc:ZDB-GENE-030131-9120]
33. myl1 ENSDARG00000014196 98943 1.562 0.761 - 0.801 - - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
34. acana ENSDARG00000035891 118 1.56 0.717 - - - - 0.843 - - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
35. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.546 0.705 - - - - 0.841 - - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
36. zgc:194470 zgc:194470 210 1.545 0.748 - - - - 0.797 - - -
37. si:ch211-207e19.11 si:ch211-207e19.11 9604 1.544 0.705 - 0.839 - - - - - -
38. aldoab ENSDARG00000034470 88942 1.534 0.750 - - - - - - - 0.784 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
39. mef2ca ENSDARG00000029764 18547 1.529 0.707 - 0.822 - - - - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
40. col11a2 ENSDARG00000012422 3204 1.529 0.820 - 0.709 - - - - - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
41. BX470254.1 ENSDARG00000097402 1389 1.527 0.766 - - - - 0.761 - - -
42. myom1a ENSDARG00000061249 10230 1.524 - - 0.755 - 0.769 - - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
43. matn4 ENSDARG00000015947 10967 1.524 0.746 - 0.778 - - - - - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
44. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.521 - 0.744 0.777 - - - - - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
45. CU469518.1 CU469518.1 214 1.519 0.703 - - - - 0.816 - - -
46. DNAJA4 ENSDARG00000051762 5657 1.516 0.724 - 0.792 - - - - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
47. emp2 ENSDARG00000044588 12560 1.515 - - 0.711 0.804 - - - - - epithelial membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040822-24]
48. neb ENSDARG00000032630, ENSDARG00000109273 19493 1.514 - 0.800 0.714 - - - - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
49. txlnba ENSDARG00000020594 9385 1.514 - - 0.786 - - - - 0.728 - taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
50. lect1 7551 1.511 0.807 - - 0.704 - - - - - leukocyte cell derived chemotaxin 1, transcript variant X1
51. PLXDC2 ENSDARG00000059950 220 1.485 0.747 - - - - 0.738 - - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
52. casq2 ENSDARG00000008982 21802 1.465 - - 0.738 - - - - 0.727 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
53. srl ENSDARG00000104587 11126 1.445 - - 0.736 - - - - 0.709 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
54. TMPO TMPO 3264 1.42 - - 0.714 - - - - 0.706 -
55. zgc:158296 ENSDARG00000070923 3935 1.416 0.712 - 0.704 - - - - - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
56. loxl1 ENSDARG00000054451 2485 0.919 - - - - - 0.919 - - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
57. matn3a ENSDARG00000069245 2410 0.912 - - - - - 0.912 - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
58. rps25 ENSDARG00000041811 52182 0.908 - - - - - - - - 0.908 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
59. chad ENSDARG00000045071 903 0.901 - - - - - 0.901 - - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
60. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 61276 0.88 - - - - - - - - 0.880 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
61. BX842614.2 BX842614.2 799 0.878 - - - - - 0.878 - - -
62. erc1b ENSDARG00000031930 3670 0.877 - - - - - - - - 0.877 ELKS/RAB6-interacting/CAST family member 1b [Source:ZFIN;Acc:ZDB-GENE-041210-51]
63. matn3b ENSDARG00000069265 856 0.868 - - - - - 0.868 - - - matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
64. thoc2 ENSDARG00000037503 8711 0.86 - - - - - - - - 0.860 THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
65. si:dkey-6n6.1 ENSDARG00000062487 222 0.857 - - - - - 0.857 - - - si:dkey-6n6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-80]
66. pgam2 ENSDARG00000057571 23387 0.853 - - - - - - - - 0.853 phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
67. COLGALT2 ENSDARG00000014670 63 0.849 - - - - - 0.849 - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
68. COBLL1_1 COBLL1_1 787 0.844 - - - - - 0.844 - - -
69. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 0.842 - - 0.842 - - - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
70. cav3 ENSDARG00000024141 14906 0.841 0.841 - - - - - - - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
71. plcl1 ENSDARG00000067676 2457 0.836 - - - - - 0.836 - - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
72. sncga ENSDARG00000034423, ENSDARG00000112260 5469 0.834 - - - - - 0.834 - - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
73. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 0.832 - - - 0.832 - - - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
74. tppp3 ENSDARG00000030463 992 0.831 - - - - - 0.831 - - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
75. tmem161a ENSDARG00000012790 16094 0.829 - - 0.829 - - - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
76. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 0.828 - - - - - - - - 0.828 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
77. fam46bb 601 0.825 - - - - - 0.825 - - - family with sequence similarity 46, member Bb
78. CU972452.1 CU972452.1 1046 0.821 - - - - - 0.821 - - -
79. klhl31 ENSDARG00000039066 13656 0.82 - - 0.820 - - - - - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
80. LRRC29 ENSDARG00000076425 284 0.819 - - - - - 0.819 - - - leucine rich repeat containing 29 [Source:ZFIN;Acc:ZDB-GENE-030131-7165]
81. plcd4a ENSDARG00000057975 241 0.812 - - - - - 0.812 - - - phospholipase C, delta 4a [Source:ZFIN;Acc:ZDB-GENE-050208-654]
82. tnnt2c ENSDARG00000032242 28801 0.808 0.808 - - - - - - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
83. nkx3.2 ENSDARG00000037639 575 0.806 - - - - - 0.806 - - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
84. tgfb3 ENSDARG00000019367 2327 0.805 - - - - - 0.805 - - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
85. zgc:153629 zgc:153629 1121 0.804 - - - - - 0.804 - - -
86. scara3 ENSDARG00000008060 169 0.804 - - - - - 0.804 - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
87. col27a1a 1747 0.803 - - - - - 0.803 - - - collagen, type XXVII, alpha 1a
88. obsl1b ENSDARG00000077388 2511 0.8 - - - - - - - - 0.800 obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
89. CABZ01026370.1 CABZ01026370.1 286 0.8 - - - - - 0.800 - - -
90. mmp23bb ENSDARG00000009825 133 0.799 - - - - - 0.799 - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
91. uqcrc2a ENSDARG00000014794 3949 0.798 - - - - - - - - 0.798 ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
92. eif3ha ENSDARG00000102452 9238 0.798 - - - - - - - - 0.798 eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
93. add3a ENSDARG00000040874 4938 0.795 - - - - - - - - 0.795 adducin 3 (gamma) a [Source:ZFIN;Acc:ZDB-GENE-030131-2721]
94. abca12 ENSDARG00000074749 2712 0.795 - - - - - - - - 0.795 ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
95. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 0.794 - - - - - - - - 0.794 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
96. ranbp10 ENSDARG00000062138, ENSDARG00000110661 2067 0.794 - - - - - - - - 0.794 RAN binding protein 10 [Source:ZFIN;Acc:ZDB-GENE-070705-86]
97. notch2 ENSDARG00000043130 4430 0.794 - - - - - - - - 0.794 notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
98. CR847510.1 CR847510.1 629 0.794 - - - - - 0.794 - - -
99. eno2 ENSDARG00000014287 2162 0.793 - - - - - - - - 0.793 enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
100. vgll4b ENSDARG00000103730 5266 0.792 - - - - - - - - 0.792 vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]

There are 163 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA