Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col8a2

Gene Name Gene ID Reads Annotation
col8a2 ENSDARG00000060893 504 collagen, type VIII, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060503-488]










Genes with expression patterns similar to col8a2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col8a2 ENSDARG00000060893 504 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type VIII, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060503-488]
2. ecscr ENSDARG00000087457 319 3.307 0.946 - - 0.707 - 0.817 0.837 - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:ZFIN;Acc:ZDB-GENE-050411-37]
3. aqp8a.1 ENSDARG00000045141, ENSDARG00000115150 830 2.444 0.819 - - - - 0.868 0.757 - - aquaporin 8a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040912-106]
4. sox18 ENSDARG00000058598 678 2.252 0.810 0.703 - - - - 0.739 - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
5. tnmd ENSDARG00000052615 42 1.679 0.884 - - - - 0.795 - - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
6. si:ch211-214p16.2 ENSDARG00000094975 59 1.672 - - - - - 0.896 0.776 - - si:ch211-214p16.2 [Source:NCBI gene;Acc:368902]
7. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 1.654 - - - - - 0.810 0.844 - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
8. MICAL2 MICAL2 396 1.639 0.818 0.821 - - - - - - -
9. SLC39A8 ENSDARG00000056757 52 1.589 0.850 - - - - 0.739 - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
10. cyp26b1 ENSDARG00000077121 1364 1.588 0.788 - - - - - 0.800 - - cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
11. cdc14aa ENSDARG00000013858 18 1.584 0.850 - - - - 0.734 - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
12. TGFBR3L TGFBR3L 16 1.584 0.850 - - - - 0.734 - - -
13. zap70 ENSDARG00000015752 1 1.584 0.850 - - - - 0.734 - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
14. cyb561 ENSDARG00000038176 55 1.584 0.850 - - - - 0.734 - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
15. RASIP1 ENSDARG00000074829 113 1.563 - - - - - 0.778 0.785 - - Ras interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-120403-3]
16. clec14a ENSDARG00000103533 718 1.556 - - - - - 0.722 0.834 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
17. si:busm1-118j2.5 si:busm1-118j2.5 10462 1.534 - - - - - 0.754 0.780 - -
18. hbae1 14666 1.53 - - - - - 0.732 0.798 - - hemoglobin, alpha embryonic 1
19. AL935210.1 ENSDARG00000088330 24618 1.518 - - - - - 0.736 0.782 - - hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
20. nt5e ENSDARG00000071017 18 0.958 0.958 - - - - - - - - 5'-nucleotidase, ecto (CD73) [Source:ZFIN;Acc:ZDB-GENE-040426-1261]
21. ndufv3_1 ENSDARG00000090389 25 0.958 0.958 - - - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
22. aspn ENSDARG00000002192 218 0.925 - - - - - 0.925 - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
23. CABZ01073954.1 CABZ01073954.1 258 0.916 0.916 - - - - - - - -
24. ikzf1 ENSDARG00000013539 94 0.915 - - - - - - 0.915 - - IKAROS family zinc finger 1 (Ikaros) [Source:ZFIN;Acc:ZDB-GENE-980526-304]
25. rapgef1a ENSDARG00000043593 416 0.906 - - - 0.906 - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
26. igfbp7 ENSDARG00000104138 155 0.902 - - - - - - 0.902 - - insulin-like growth factor binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2423]
27. aqp8b ENSDARG00000089749 108 0.902 0.902 - - - - - - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
28. IER2 IER2 604 0.901 - - - 0.901 - - - - -
29. kdm4ab ENSDARG00000019103 521 0.899 - - - 0.899 - - - - - lysine (K)-specific demethylase 4A, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-030131-6279]
30. Sep-10_1 Sep-10_1 424 0.896 - - - 0.896 - - - - -
31. il15 ENSDARG00000052361 219 0.886 0.886 - - - - - - - - interleukin 15 [Source:ZFIN;Acc:ZDB-GENE-060213-2]
32. gpn3 ENSDARG00000069525 499 0.886 - - - - - - 0.886 - - GPN-loop GTPase 3 [Source:ZFIN;Acc:ZDB-GENE-040724-141]
33. dhcr24 ENSDARG00000013236 61 0.884 0.884 - - - - - - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
34. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 0.884 0.884 - - - - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
35. cabp2a ENSDARG00000052016 19 0.884 0.884 - - - - - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
36. zgc:174224 ENSDARG00000093875 4 0.884 0.884 - - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
37. si:dkey-146l4.1 si:dkey-146l4.1 113 0.884 0.884 - - - - - - - -
38. fgd1 ENSDARG00000100402 18 0.884 0.884 - - - - - - - - FYVE, RhoGEF and PH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-33]
39. COLGALT2 ENSDARG00000014670 63 0.884 0.884 - - - - - - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
40. crebl2 ENSDARG00000104049 16 0.884 0.884 - - - - - - - - cAMP responsive element binding protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-456]
41. cldn15a ENSDARG00000112049 264 0.88 - - - - - 0.880 - - - claudin 15a [Source:ZFIN;Acc:ZDB-GENE-040426-1305]
42. RBM12B ENSDARG00000079717 541 0.876 - - - 0.876 - - - - - RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
43. ARHGEF17 ENSDARG00000101644 625 0.875 - - - 0.875 - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
44. agfg1b ENSDARG00000019526 472 0.872 - - - 0.872 - - - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
45. pik3r5 ENSDARG00000102762 56 0.87 - - - - - - 0.870 - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
46. slc2a1a ENSDARG00000001437, ENSDARG00000116129 1614 0.866 - - - - - 0.866 - - - solute carrier family 2 (facilitated glucose transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3158]
47. nmt1b ENSDARG00000057206 654 0.863 - - - - - - 0.863 - - N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
48. si:dkey-29j8.4 si:dkey-29j8.4 17 0.861 - - - - - 0.861 - - -
49. prosc 925 0.861 - - - 0.861 - - - - - pyridoxal phosphate binding protein, transcript variant X1
50. grhl3 ENSDARG00000078552 897 0.86 - - - 0.860 - - - - - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
51. CABZ01080142.1 CABZ01080142.1 52 0.86 0.860 - - - - - - - -
52. si:dkey-238g7.2 si:dkey-238g7.2 181 0.859 - 0.859 - - - - - - -
53. cbx1a ENSDARG00000004189, ENSDARG00000110945 3297 0.858 - 0.858 - - - - - - - chromobox homolog 1a (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4945]
54. etv2 ENSDARG00000053868 715 0.857 - - - - - 0.857 - - - ets variant 2 [Source:ZFIN;Acc:ZDB-GENE-050622-14]
55. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 0.85 0.850 - - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
56. adam10b ENSDARG00000015502 26 0.85 0.850 - - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
57. si:ch211-119o8.4 ENSDARG00000075562 1 0.85 0.850 - - - - - - - - si:ch211-119o8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-15]
58. AL935184.1 ENSDARG00000070039 1 0.85 0.850 - - - - - - - -
59. fam163b ENSDARG00000073914 46 0.85 0.850 - - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
60. si:ch1073-15f19.2 ENSDARG00000095640 4 0.85 0.850 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
61. plekha7a ENSDARG00000060813 179 0.85 0.850 - - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
62. si:dkey-189d19.1 si:dkey-189d19.1 2 0.85 0.850 - - - - - - - -
63. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 0.85 0.850 - - - - - - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
64. COBLL1 COBLL1 14 0.85 0.850 - - - - - - - -
65. si:ch211-160d14.9 8 0.85 0.850 - - - - - - - - si:ch211-160d14.9, transcript variant X1
66. si:dkeyp-46h3.4 si:dkeyp-46h3.4 1 0.85 0.850 - - - - - - - -
67. arl11l arl11l 31 0.85 0.850 - - - - - - - -
68. CABZ01076534.1 CABZ01076534.1 1 0.85 0.850 - - - - - - - -
69. or115-14 ENSDARG00000094235 17 0.85 0.850 - - - - - - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
70. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.85 0.850 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
71. TMEM260 ENSDARG00000076362 63 0.85 0.850 - - - - - - - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
72. PLCG2 ENSDARG00000068763 11 0.85 0.850 - - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
73. BX119963.1 ENSDARG00000096135 28 0.85 0.850 - - - - - - - -
74. zgc:172051 ENSDARG00000086569 12 0.85 0.850 - - - - - - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
75. 5S_rRNA_10 5S_rRNA_10 2 0.85 0.850 - - - - - - - -
76. CU695076.1 CU695076.1 7 0.85 0.850 - - - - - - - -
77. dcun1d5 ENSDARG00000100363 3 0.85 0.850 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
78. si:dkey-21n8.3 si:dkey-21n8.3 5 0.85 0.850 - - - - - - - -
79. gcsha ENSDARG00000091655, ENSDARG00000111225 1 0.85 0.850 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
80. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 0.85 0.850 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
81. cdc73 ENSDARG00000020201 22 0.85 0.850 - - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
82. dmbx1a ENSDARG00000009922 284 0.85 0.850 - - - - - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
83. ASPG ENSDARG00000052942 1 0.85 0.850 - - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
84. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 0.85 0.850 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
85. mei4 ENSDARG00000043912 10 0.85 0.850 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
86. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 0.85 0.850 - - - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
87. ciita ENSDARG00000090851 5 0.85 0.850 - - - - - - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
88. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.85 0.850 - - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
89. cyp19a1b ENSDARG00000098360 8 0.85 0.850 - - - - - - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
90. hoxc9a ENSDARG00000092809 18 0.85 0.850 - - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
91. si:ch211-219a15.4 ENSDARG00000068951 3 0.85 0.850 - - - - - - - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
92. ovca2 ENSDARG00000103748 38 0.85 0.850 - - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
93. slc10a4 ENSDARG00000009131 51 0.85 0.850 - - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
94. csrnp1b ENSDARG00000038429 10 0.85 0.850 - - - - - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
95. sele ENSDARG00000009123 122 0.85 0.850 - - - - - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
96. si:dkey-157e10.5 si:dkey-157e10.5 1 0.85 0.850 - - - - - - - -
97. cx45.6 cx45.6 26 0.85 0.850 - - - - - - - -
98. olfcs2 ENSDARG00000100451 1 0.85 0.850 - - - - - - - - olfactory receptor C family, s2 [Source:ZFIN;Acc:ZDB-GENE-060503-238]
99. PARM1 ENSDARG00000114063 58 0.85 0.850 - - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
100. sod3b ENSDARG00000079183 39 0.85 0.850 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]

There are 663 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA