Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col8a2

Gene Name Gene ID Reads Annotation
col8a2 ENSDARG00000060893 504 collagen, type VIII, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060503-488]










Genes with expression patterns similar to col8a2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col8a2 ENSDARG00000060893 504 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type VIII, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060503-488]
2. ecscr ENSDARG00000087457 319 3.307 0.946 - - 0.707 - 0.817 0.837 - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:ZFIN;Acc:ZDB-GENE-050411-37]
3. aqp8a.1 ENSDARG00000045141, ENSDARG00000115150 830 2.444 0.819 - - - - 0.868 0.757 - - aquaporin 8a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040912-106]
4. sox18 ENSDARG00000058598 678 2.252 0.810 0.703 - - - - 0.739 - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
5. tnmd ENSDARG00000052615 42 1.679 0.884 - - - - 0.795 - - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
6. si:ch211-214p16.2 ENSDARG00000094975 59 1.672 - - - - - 0.896 0.776 - - si:ch211-214p16.2 [Source:NCBI gene;Acc:368902]
7. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 1.654 - - - - - 0.810 0.844 - - chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
8. MICAL2 MICAL2 396 1.639 0.818 0.821 - - - - - - -
9. SLC39A8 ENSDARG00000056757 52 1.589 0.850 - - - - 0.739 - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
10. cyp26b1 ENSDARG00000077121 1364 1.588 0.788 - - - - - 0.800 - - cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
11. zap70 ENSDARG00000015752 1 1.584 0.850 - - - - 0.734 - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
12. cdc14aa ENSDARG00000013858 18 1.584 0.850 - - - - 0.734 - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
13. cyb561 ENSDARG00000038176 55 1.584 0.850 - - - - 0.734 - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
14. TGFBR3L TGFBR3L 16 1.584 0.850 - - - - 0.734 - - -
15. RASIP1 ENSDARG00000074829 113 1.563 - - - - - 0.778 0.785 - - Ras interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-120403-3]
16. clec14a ENSDARG00000103533 718 1.556 - - - - - 0.722 0.834 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
17. si:busm1-118j2.5 si:busm1-118j2.5 10462 1.534 - - - - - 0.754 0.780 - -
18. hbae1 14666 1.53 - - - - - 0.732 0.798 - - hemoglobin, alpha embryonic 1
19. AL935210.1 ENSDARG00000088330 24618 1.518 - - - - - 0.736 0.782 - - hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
20. ndufv3_1 ENSDARG00000090389 25 0.958 0.958 - - - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
21. nt5e ENSDARG00000071017 18 0.958 0.958 - - - - - - - - 5'-nucleotidase, ecto (CD73) [Source:ZFIN;Acc:ZDB-GENE-040426-1261]
22. aspn ENSDARG00000002192 218 0.925 - - - - - 0.925 - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
23. CABZ01073954.1 CABZ01073954.1 258 0.916 0.916 - - - - - - - -
24. ikzf1 ENSDARG00000013539 94 0.915 - - - - - - 0.915 - - IKAROS family zinc finger 1 (Ikaros) [Source:ZFIN;Acc:ZDB-GENE-980526-304]
25. rapgef1a ENSDARG00000043593 416 0.906 - - - 0.906 - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
26. igfbp7 ENSDARG00000104138 155 0.902 - - - - - - 0.902 - - insulin-like growth factor binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2423]
27. aqp8b ENSDARG00000089749 108 0.902 0.902 - - - - - - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
28. IER2 IER2 604 0.901 - - - 0.901 - - - - -
29. kdm4ab ENSDARG00000019103 521 0.899 - - - 0.899 - - - - - lysine (K)-specific demethylase 4A, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-030131-6279]
30. Sep-10_1 Sep-10_1 424 0.896 - - - 0.896 - - - - -
31. il15 ENSDARG00000052361 219 0.886 0.886 - - - - - - - - interleukin 15 [Source:ZFIN;Acc:ZDB-GENE-060213-2]
32. gpn3 ENSDARG00000069525 499 0.886 - - - - - - 0.886 - - GPN-loop GTPase 3 [Source:ZFIN;Acc:ZDB-GENE-040724-141]
33. dhcr24 ENSDARG00000013236 61 0.884 0.884 - - - - - - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
34. crebl2 ENSDARG00000104049 16 0.884 0.884 - - - - - - - - cAMP responsive element binding protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-456]
35. fgd1 ENSDARG00000100402 18 0.884 0.884 - - - - - - - - FYVE, RhoGEF and PH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-33]
36. cabp2a ENSDARG00000052016 19 0.884 0.884 - - - - - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
37. zgc:174224 ENSDARG00000093875 4 0.884 0.884 - - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
38. si:dkey-146l4.1 si:dkey-146l4.1 113 0.884 0.884 - - - - - - - -
39. COLGALT2 ENSDARG00000014670 63 0.884 0.884 - - - - - - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
40. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 0.884 0.884 - - - - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
41. cldn15a ENSDARG00000112049 264 0.88 - - - - - 0.880 - - - claudin 15a [Source:ZFIN;Acc:ZDB-GENE-040426-1305]
42. RBM12B ENSDARG00000079717 541 0.876 - - - 0.876 - - - - - RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
43. ARHGEF17 ENSDARG00000101644 625 0.875 - - - 0.875 - - - - - Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
44. agfg1b ENSDARG00000019526 472 0.872 - - - 0.872 - - - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
45. pik3r5 ENSDARG00000102762 56 0.87 - - - - - - 0.870 - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
46. slc2a1a ENSDARG00000001437, ENSDARG00000116129 1614 0.866 - - - - - 0.866 - - - solute carrier family 2 (facilitated glucose transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3158]
47. nmt1b ENSDARG00000057206 654 0.863 - - - - - - 0.863 - - N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
48. si:dkey-29j8.4 si:dkey-29j8.4 17 0.861 - - - - - 0.861 - - -
49. prosc 925 0.861 - - - 0.861 - - - - - pyridoxal phosphate binding protein, transcript variant X1
50. grhl3 ENSDARG00000078552 897 0.86 - - - 0.860 - - - - - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
51. CABZ01080142.1 CABZ01080142.1 52 0.86 0.860 - - - - - - - -
52. si:dkey-238g7.2 si:dkey-238g7.2 181 0.859 - 0.859 - - - - - - -
53. cbx1a ENSDARG00000004189, ENSDARG00000110945 3297 0.858 - 0.858 - - - - - - - chromobox homolog 1a (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4945]
54. etv2 ENSDARG00000053868 715 0.857 - - - - - 0.857 - - - ets variant 2 [Source:ZFIN;Acc:ZDB-GENE-050622-14]
55. si:dkey-117p18.2 si:dkey-117p18.2 104 0.85 0.850 - - - - - - - -
56. BX119910.6 BX119910.6 11 0.85 0.850 - - - - - - - -
57. FAM150A 14 0.85 0.850 - - - - - - - - family with sequence similarity 150 member A, transcript variant X2
58. hbl2 ENSDARG00000094681, ENSDARG00000115699 146 0.85 0.850 - - - - - - - - hexose-binding lectin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-286]
59. bmpr2b ENSDARG00000020057 8 0.85 0.850 - - - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
60. si:ch211-13o20.1 si:ch211-13o20.1 30 0.85 0.850 - - - - - - - -
61. loxhd1b ENSDARG00000074638 6 0.85 0.850 - - - - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
62. si:dkey-217m5.3 si:dkey-217m5.3 22 0.85 0.850 - - - - - - - -
63. ZBTB40 ENSDARG00000091762 57 0.85 0.850 - - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
64. dcun1d5 ENSDARG00000100363 3 0.85 0.850 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
65. hoxc9a ENSDARG00000092809 18 0.85 0.850 - - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
66. si:dkey-230i18.1 si:dkey-230i18.1 3 0.85 0.850 - - - - - - - -
67. CABZ01079304.1 CABZ01079304.1 7 0.85 0.850 - - - - - - - -
68. GMEB2 ENSDARG00000093240 6 0.85 0.850 - - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
69. gp1bb ENSDARG00000074441 116 0.85 0.850 - - - - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
70. OSBP2 ENSDARG00000053487 15 0.85 0.850 - - - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
71. erc1a ENSDARG00000009941, ENSDARG00000110965 7 0.85 0.850 - - - - - - - - ELKS/RAB6-interacting/CAST family member 1a [Source:ZFIN;Acc:ZDB-GENE-091214-5]
72. si:dkey-117k10.8 si:dkey-117k10.8 17 0.85 0.850 - - - - - - - -
73. Metazoa_SRP_2 Metazoa_SRP_2 2 0.85 0.850 - - - - - - - -
74. PLCB2 3 0.85 0.850 - - - - - - - - phospholipase C, beta 2
75. gcsha ENSDARG00000091655, ENSDARG00000111225 1 0.85 0.850 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
76. ucp3 ENSDARG00000091209 137 0.85 0.850 - - - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
77. BX000701.3 BX000701.3 4 0.85 0.850 - - - - - - - -
78. ano6 ENSDARG00000061544 21 0.85 0.850 - - - - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
79. mrc1b ENSDARG00000038822 73 0.85 0.850 - - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
80. ssh1b ENSDARG00000010031 4 0.85 0.850 - - - - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
81. RNF14 ENSDARG00000043905 41 0.85 0.850 - - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
82. cx45.6 cx45.6 26 0.85 0.850 - - - - - - - -
83. ano2 ENSDARG00000101363 50 0.85 0.850 - - - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
84. TMEM221 TMEM221 62 0.85 0.850 - - - - - - - -
85. edn1 ENSDARG00000036912 74 0.85 0.850 - - - - - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
86. slc6a6b ENSDARG00000098438 7 0.85 0.850 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
87. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 0.85 0.850 - - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
88. F2RL3 ENSDARG00000079399 29 0.85 0.850 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
89. HIST1H4J_4 HIST1H4J_4 9 0.85 0.850 - - - - - - - -
90. calhm1 ENSDARG00000077021 2 0.85 0.850 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
91. ppid_1 ENSDARG00000038835 4 0.85 0.850 - - - - - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
92. arl8 ENSDARG00000094709 6 0.85 0.850 - - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
93. BX323854.3 BX323854.3 62 0.85 0.850 - - - - - - - -
94. FP236168.1 FP236168.1 150 0.85 0.850 - - - - - - - -
95. AL807829.1 AL807829.1 2 0.85 0.850 - - - - - - - -
96. si:ch211-170d12.2 si:ch211-170d12.2 1 0.85 0.850 - - - - - - - -
97. wu:fy63c09 1 0.85 0.850 - - - - - - - - wu:fy63c09
98. si:ch1073-15f19.2 ENSDARG00000095640 4 0.85 0.850 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
99. cx34.5 ENSDARG00000069411 3 0.85 0.850 - - - - - - - - connexin 34.5 [Source:ZFIN;Acc:ZDB-GENE-050224-2]
100. EHD4 ENSDARG00000054302 46 0.85 0.850 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]

There are 663 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA