Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col8a1b

Gene Name Gene ID Reads Annotation
col8a1b ENSDARG00000003533 18 collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]










Genes with expression patterns similar to col8a1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col8a1b ENSDARG00000003533 18 7 - 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
2. si:ch211-57m13.9 ENSDARG00000095884 10 2 - 1.000 - - - - - - 1.000 si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
3. pcyox1 ENSDARG00000103052 20 1.982 - 1.000 - - - 0.982 - - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
4. egr2a ENSDARG00000044098 1101 1.982 - 1.000 - - - 0.982 - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
5. fermt3a fermt3a 56 1.979 - 1.000 - - - 0.979 - - -
6. dmrt1 ENSDARG00000007349 16 1.942 - 1.000 - - 0.942 - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
7. EXD1 ENSDARG00000098669 27 1.941 - 0.941 - - - - - - 1.000 exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
8. MOB2 MOB2 4 1.935 - 1.000 0.935 - - - - - -
9. adam10b ENSDARG00000015502 26 1.935 - 1.000 0.935 - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
10. LRRK1_1 LRRK1_1 11 1.924 - 1.000 - - 0.924 - - - -
11. cldnd ENSDARG00000006580 17 1.905 - 1.000 - - - 0.905 - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
12. cybb ENSDARG00000056615 177 1.901 - 1.000 - - - 0.901 - - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
13. si:ch211-255f4.2 ENSDARG00000098898 6 1.865 - - 0.961 - - - - - 0.904 si:ch211-255f4.2 [Source:ZFIN;Acc:ZDB-GENE-050208-708]
14. rag2 ENSDARG00000052121 15 1.865 - - - - - 0.954 - - 0.911 recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
15. si:dkey-20d21.12 ENSDARG00000092123 38 1.799 - 1.000 - - 0.799 - - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
16. CR626874.1 ENSDARG00000100141 55 1.735 - 1.000 - - - - - - 0.735
17. si:dkeyp-10a3.2 18 1.731 - 1.000 - - - - - - 0.731 si:dkeyp-10a3.2
18. CABZ01073954.1 CABZ01073954.1 258 1.712 - 1.000 0.712 - - - - - -
19. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.654 - - - - 0.774 0.880 - - - forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
20. mfge8a ENSDARG00000015349 66 1.576 - 0.875 - - - 0.701 - - - milk fat globule-EGF factor 8 protein a [Source:ZFIN;Acc:ZDB-GENE-050327-9]
21. itga4 ENSDARG00000103056 223 1.565 - - - - - 0.846 - - 0.719 integrin alpha 4 [Source:ZFIN;Acc:ZDB-GENE-110411-108]
22. CR628395.1 ENSDARG00000116298 75 1.535 - - - - 0.796 0.739 - - -
23. FAM117B FAM117B 225 1 - 1.000 - - - - - - -
24. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - 1.000 - - - - - - -
25. pcyt1ba ENSDARG00000058162 206 1 - 1.000 - - - - - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
26. CR792453.1 ENSDARG00000095699 4 1 - 1.000 - - - - - - -
27. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - 1.000 - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
28. si:ch211-278p9.1 ENSDARG00000087532 18 1 - - - - - - - - 1.000 si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
29. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
30. SNORD59 SNORD59 7 1 - 1.000 - - - - - - -
31. CU467888.1 CU467888.1 30 1 - 1.000 - - - - - - -
32. SDR16C5 SDR16C5 34 1 - 1.000 - - - - - - -
33. ZNF337_16 ZNF337_16 22 1 - 1.000 - - - - - - -
34. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 1 - 1.000 - - - - - - - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
35. neu3.5 ENSDARG00000096368 5 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
36. apnl ENSDARG00000090900 21 1 - 1.000 - - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
37. si:dkey-222h21.4 1 1 - 1.000 - - - - - - - si:dkey-222h21.4
38. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - 1.000 - - - - - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
39. papd4_1 6 1 - - - - - - - - 1.000 PAP associated domain containing 4, transcript variant X1
40. im:7141269 ENSDARG00000101756 30 1 - 1.000 - - - - - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
41. GADD45G_1 GADD45G_1 236 1 - 1.000 - - - - - - -
42. si:ch211-239j9.1 ENSDARG00000096319 27 1 - 1.000 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
43. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
44. tnxb 30 1 - 1.000 - - - - - - - tenascin XB
45. BX000703.2 BX000703.2 10 1 - 1.000 - - - - - - -
46. gpr61 ENSDARG00000055570 128 1 - 1.000 - - - - - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
47. si:dkey-241f21.7 si:dkey-241f21.7 3 1 - 1.000 - - - - - - -
48. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - 1.000 - - - - - - -
49. kcna1 kcna1 174 1 - 1.000 - - - - - - -
50. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 - 1.000 - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
51. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - 1.000 - - - - - - -
52. si:ch211-237l4.6 ENSDARG00000056915 49 1 - 1.000 - - - - - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
53. irf1a ENSDARG00000043492 5 1 - - - - - - - - 1.000 interferon regulatory factor 1a [Source:ZFIN;Acc:ZDB-GENE-060421-4031]
54. SDSL ENSDARG00000074698 34 1 - 1.000 - - - - - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
55. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
56. CABZ01008480.1 CABZ01008480.1 0 1 - 1.000 - - - - - - -
57. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1 - 1.000 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
58. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
59. si:dkeyp-33e11.1 6 1 - 1.000 - - - - - - - si:dkeyp-33e11.1, transcript variant X3
60. nlrc3 ENSDARG00000103146 6 1 - 1.000 - - - - - - - NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]
61. si:dkey-14o6.7 si:dkey-14o6.7 9 1 - 1.000 - - - - - - -
62. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - 1.000 - - - - - - -
63. st6gal1 ENSDARG00000044514 142 1 - 1.000 - - - - - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
64. rassf4 ENSDARG00000012460 43 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
65. klc4 ENSDARG00000086985 4 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
66. arhgef9a ENSDARG00000061746 58 1 - 1.000 - - - - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
67. cyp27a7 ENSDARG00000033802 216 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
68. GLS2 GLS2 10 1 - 1.000 - - - - - - -
69. slc1a9 ENSDARG00000098269 12 1 - 1.000 - - - - - - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
70. GRIN2B GRIN2B 140 1 - 1.000 - - - - - - -
71. si:dkey-19a16.2 ENSDARG00000058794 8 1 - 1.000 - - - - - - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
72. lhx5 ENSDARG00000057936 785 1 - 1.000 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
73. sowahca ENSDARG00000098790 1 1 - 1.000 - - - - - - - sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
74. CCDC66 2 1 - 1.000 - - - - - - - coiled-coil domain containing 66
75. Metazoa_SRP_6 Metazoa_SRP_6 7 1 - - - - - - - - 1.000
76. si:dkeyp-77c8.1 ENSDARG00000093940 0 1 - 1.000 - - - - - - - si:dkeyp-77c8.1 [Source:ZFIN;Acc:ZDB-GENE-090313-397]
77. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
78. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
79. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
80. si:dkey-81p22.11 ENSDARG00000093797 68 1 - 1.000 - - - - - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
81. ODF2 ODF2 6 1 - 1.000 - - - - - - -
82. entpd2b ENSDARG00000044795 7 1 - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
83. CT027800.1 CT027800.1 36 1 - 1.000 - - - - - - -
84. nid2b ENSDARG00000009471 4 1 - 1.000 - - - - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
85. lsm10 5 1 - 1.000 - - - - - - - LSM10, U7 small nuclear RNA associated
86. ptpn6 ENSDARG00000089043 168 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
87. ERAP1 ERAP1 0 1 - 1.000 - - - - - - -
88. FP236851.1 FP236851.1 10 1 - 1.000 - - - - - - -
89. lama3 ENSDARG00000071462 1 1 - 1.000 - - - - - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
90. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
91. CU652893.1 ENSDARG00000104131 3 1 - 1.000 - - - - - - -
92. il12bb ENSDARG00000054542 6 1 - 1.000 - - - - - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
93. zgc:165627 zgc:165627 4 1 - 1.000 - - - - - - -
94. CABZ01057951.1 CABZ01057951.1 10 1 - 1.000 - - - - - - -
95. MLLT4 MLLT4 67 1 - 1.000 - - - - - - -
96. scg2b ENSDARG00000038574 345 1 - 1.000 - - - - - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
97. RNaseP_nuc RNaseP_nuc 7 1 - 1.000 - - - - - - -
98. cacng2a ENSDARG00000032565 99 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
99. fez1 ENSDARG00000023174 701 1 - 1.000 - - - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
100. erap2 ENSDARG00000098618 16 1 - 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]

There are 926 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA