Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col8a1a

Gene Name Gene ID Reads Annotation
col8a1a ENSDARG00000077403, ENSDARG00000111174 11125 collagen, type VIII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070912-274]










Genes with expression patterns similar to col8a1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col8a1a ENSDARG00000077403, ENSDARG00000111174 11125 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type VIII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070912-274]
2. nucb2b ENSDARG00000036291 911 1.698 - 0.722 - 0.976 - - - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
3. serbp1a_1 ENSDARG00000074242 13588 1.692 0.737 - - 0.955 - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
4. ing5b ENSDARG00000068175 2502 1.689 - 0.714 - 0.975 - - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
5. kif11 ENSDARG00000010948 4973 1.666 - - - 0.962 - - 0.704 - - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
6. bves ENSDARG00000058548 2291 1.613 - 0.795 - - - - 0.818 - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
7. col5a2a ENSDARG00000031678 7743 1.581 - - - - - - 0.755 - 0.826 collagen, type V, alpha 2a [Source:ZFIN;Acc:ZDB-GENE-030616-13]
8. cxcl12a ENSDARG00000037116 5433 1.579 0.772 0.807 - - - - - - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
9. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.572 - 0.737 - 0.835 - - - - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
10. hypk ENSDARG00000059725 20584 1.538 0.795 - - - - 0.743 - - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
11. ddx3 ddx3 4076 1.529 - 0.726 - - - - 0.803 - -
12. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.528 0.790 - - - - 0.738 - - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
13. rcn1 ENSDARG00000070006 8455 1.523 - 0.738 - - - - 0.785 - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
14. HRC ENSDARG00000045947 10287 1.5 0.783 - - - - 0.717 - - - histidine rich calcium binding protein [Source:ZFIN;Acc:ZDB-GENE-041008-189]
15. cct4 ENSDARG00000013475 23959 1.449 - - - - - 0.702 0.747 - - chaperonin containing TCP1, subunit 4 (delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1421]
16. hoxc10a ENSDARG00000070348 2323 1.445 - 0.729 - - - - - - 0.716 homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
17. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.43 0.715 0.715 - - - - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
18. pon2 ENSDARG00000016856 1382 1.426 0.712 0.714 - - - - - - - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
19. col9a3 ENSDARG00000037845 6564 1.408 - - - - - 0.705 - - 0.703 collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
20. aass ENSDARG00000051816 3795 0.982 - - - 0.982 - - - - - aminoadipate-semialdehyde synthase [Source:ZFIN;Acc:ZDB-GENE-061220-8]
21. ndrg3a ENSDARG00000013087 5581 0.981 - - - 0.981 - - - - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
22. fam96b 2255 0.978 - - - 0.978 - - - - - family with sequence similarity 96, member B
23. ensab ENSDARG00000061644 2436 0.978 - - - 0.978 - - - - - endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
24. gmds ENSDARG00000026629 3976 0.978 - - - 0.978 - - - - - GDP-mannose 4,6-dehydratase [Source:ZFIN;Acc:ZDB-GENE-050419-45]
25. PACS1 PACS1 2061 0.977 - - - 0.977 - - - - -
26. RTKN RTKN 1537 0.977 - - - 0.977 - - - - -
27. yme1l1a ENSDARG00000075192 2634 0.977 - - - 0.977 - - - - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
28. MARK4 ENSDARG00000024966 3377 0.977 - - - 0.977 - - - - - microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
29. selt2 12741 0.977 - - - 0.977 - - - - - selenoprotein T, 2
30. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 0.977 - - - 0.977 - - - - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
31. itgav ENSDARG00000006314 4277 0.977 - - - 0.977 - - - - - integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
32. rps8a ENSDARG00000055996 2785 0.977 - - - 0.977 - - - - - ribosomal protein S8a [Source:ZFIN;Acc:ZDB-GENE-030131-8626]
33. kctd10 ENSDARG00000017115 1659 0.976 - - - 0.976 - - - - - potassium channel tetramerization domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2843]
34. pnn ENSDARG00000015851 1269 0.976 - - - 0.976 - - - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
35. agxt2 ENSDARG00000100709 799 0.976 - - - 0.976 - - - - - alanine--glyoxylate aminotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-100]
36. ndufs2 ENSDARG00000007526 6516 0.976 - - - 0.976 - - - - - NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273]
37. ZNF337_6 ZNF337_6 898 0.976 - - - 0.976 - - - - -
38. gpsm1a ENSDARG00000092517 784 0.976 - - - 0.976 - - - - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
39. ndufab1b ENSDARG00000014915 12796 0.976 - - - 0.976 - - - - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
40. camk2n1a ENSDARG00000025855 1467 0.976 - - - 0.976 - - - - - calcium/calmodulin-dependent protein kinase II inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-319]
41. mir203a 1519 0.976 - - - 0.976 - - - - - microRNA 203a
42. wu:fe05a04 ENSDARG00000087530 843 0.976 - - - 0.976 - - - - - wu:fe05a04 [Source:ZFIN;Acc:ZDB-GENE-030131-4873]
43. shfm1 7620 0.976 - - - 0.976 - - - - - split hand/foot malformation (ectrodactyly) type 1
44. ell2 ENSDARG00000006251 2895 0.976 - - - 0.976 - - - - - elongation factor, RNA polymerase II, 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1717]
45. acadsb ENSDARG00000076780 2382 0.976 - - - 0.976 - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
46. ric8b ENSDARG00000005972, ENSDARG00000116212 1119 0.975 - - - 0.975 - - - - - RIC8 guanine nucleotide exchange factor B [Source:ZFIN;Acc:ZDB-GENE-030131-6435]
47. CR382363.1 ENSDARG00000097381 1637 0.975 - - - 0.975 - - - - -
48. flot1b ENSDARG00000037998 13600 0.975 - - - 0.975 - - - - - flotillin 1b [Source:ZFIN;Acc:ZDB-GENE-020430-2]
49. ndufb10 ENSDARG00000028889 7680 0.975 - - - 0.975 - - - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:ZFIN;Acc:ZDB-GENE-040426-1691]
50. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.975 - - - 0.975 - - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
51. tspan5a ENSDARG00000086033 1865 0.975 - - - 0.975 - - - - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
52. dctd ENSDARG00000036990 2168 0.975 - - - 0.975 - - - - - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
53. ak2 ENSDARG00000005926 7598 0.974 - - - 0.974 - - - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
54. ADAM22 ENSDARG00000060532 2259 0.974 - - - 0.974 - - - - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
55. eif4ebp2 ENSDARG00000031819 13168 0.974 - - - 0.974 - - - - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
56. plxna1 plxna1 1357 0.974 - - - 0.974 - - - - -
57. GUSB ENSDARG00000063126 2712 0.974 - - - 0.974 - - - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
58. Sep-02 Sep-02 10074 0.974 - - - 0.974 - - - - -
59. dlg5a ENSDARG00000074059 1834 0.974 - - - 0.974 - - - - - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
60. skib ENSDARG00000008034 6518 0.974 - - - 0.974 - - - - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
61. inppl1a ENSDARG00000104222 6256 0.973 - - - 0.973 - - - - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
62. seh1l ENSDARG00000004280 2915 0.972 - - - 0.972 - - - - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
63. atp6v1c1a ENSDARG00000023967 4611 0.972 - - - 0.972 - - - - - ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
64. senp3a ENSDARG00000095538, ENSDARG00000116812 2292 0.972 - - - 0.972 - - - - - SUMO specific peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2303]
65. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.972 - - - 0.972 - - - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
66. pou6f1 ENSDARG00000011570 1501 0.972 - - - 0.972 - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
67. ssr2 ENSDARG00000005230 31940 0.972 - - - 0.972 - - - - - signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
68. EEF1E1 ENSDARG00000071774 3806 0.972 - - - 0.972 - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
69. kdm2aa ENSDARG00000059653 2389 0.972 - - - 0.972 - - - - - lysine (K)-specific demethylase 2Aa [Source:ZFIN;Acc:ZDB-GENE-061215-144]
70. sdhb ENSDARG00000075768 5493 0.972 - - - 0.972 - - - - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
71. nucb2a ENSDARG00000036299, ENSDARG00000112218 10499 0.971 - - - 0.971 - - - - - nucleobindin 2a [Source:ZFIN;Acc:ZDB-GENE-030826-14]
72. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 0.97 - - - 0.970 - - - - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
73. sri ENSDARG00000058593 13152 0.97 - - - 0.970 - - - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
74. nipblb ENSDARG00000061052 6109 0.968 - - - 0.968 - - - - - nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
75. psmd8 ENSDARG00000020454 6645 0.968 - - - 0.968 - - - - - proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
76. scrt2 ENSDARG00000056175 4331 0.967 - - - 0.967 - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
77. sptbn2 ENSDARG00000053956 8452 0.967 - - - 0.967 - - - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
78. rpl4 ENSDARG00000041182 18655 0.966 - - - 0.966 - - - - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
79. notch1b ENSDARG00000052094 7874 0.966 - - - 0.966 - - - - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
80. cenpe ENSDARG00000063385 4428 0.966 - - - 0.966 - - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
81. rbb4l ENSDARG00000015208 5542 0.965 - - - 0.965 - - - - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
82. CABZ01081490.1 ENSDARG00000111653 11892 0.965 - - - 0.965 - - - - -
83. ppm1bb ENSDARG00000011496 10196 0.965 - - - 0.965 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-185]
84. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 0.962 - - - 0.962 - - - - - cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
85. nop58 ENSDARG00000104353 8497 0.961 - - - 0.961 - - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
86. rpa2 ENSDARG00000037188 4284 0.961 - - - 0.961 - - - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
87. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 0.959 - - - 0.959 - - - - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
88. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 0.956 - - - 0.956 - - - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
89. ube2v2 ENSDARG00000028198 23341 0.956 - - - 0.956 - - - - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
90. banf1 ENSDARG00000037009 16466 0.95 - - - 0.950 - - - - - barrier to autointegration factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6657]
91. pygma ENSDARG00000055518 15972 0.949 - - - 0.949 - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
92. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 0.946 - - - 0.946 - - - - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
93. foxp4 ENSDARG00000076120 9458 0.941 - - - 0.941 - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
94. anxa1a ENSDARG00000026726 23173 0.935 - - - 0.935 - - - - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
95. zgc:86725 2559 0.934 - - - - - - 0.934 - - zgc:86725
96. pl10 pl10 10795 0.934 - - - 0.934 - - - - -
97. eif3c ENSDARG00000016443 18003 0.93 - - - 0.930 - - - - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
98. rps15a ENSDARG00000010160 94499 0.922 - - - 0.922 - - - - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
99. ahcy ENSDARG00000005191 50741 0.912 - - - 0.912 - - - - - adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
100. bin1 bin1 3199 0.903 - 0.903 - - - - - - -

There are 402 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA