Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col7a1l

Gene Name Gene ID Reads Annotation
col7a1l ENSDARG00000069692 44 collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]










Genes with expression patterns similar to col7a1l

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col7a1l ENSDARG00000069692 44 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
2. cx32.3 ENSDARG00000041787 33 1.805 - 0.898 - - - 0.907 - - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
3. sema6e ENSDARG00000000189 35 1.789 0.789 - - - - 1.000 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
4. fgf10b ENSDARG00000100475 17 1.789 0.789 - - - - 1.000 - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
5. aqp9b ENSDARG00000053480 16 1.723 - - - 0.723 - 1.000 - - - aquaporin 9b [Source:ZFIN;Acc:ZDB-GENE-070911-1]
6. si:ch211-202c21.7 ENSDARG00000094126 2 1.718 - - - - - 1.000 - 0.718 - si:ch211-202c21.7 [Source:ZFIN;Acc:ZDB-GENE-081031-16]
7. cyp2k18 ENSDARG00000104593 27 1.709 - 0.898 - - - - - - 0.811 cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
8. btk ENSDARG00000004433 106 1.699 0.789 0.910 - - - - - - - Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070531-1]
9. dyx1c1 dyx1c1 36 1.698 - 0.825 - - - 0.873 - - -
10. si:rp71-1i20.2 ENSDARG00000043198 113 1.667 0.761 0.906 - - - - - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
11. slc27a6 ENSDARG00000046053 57 1.654 - 0.907 0.747 - - - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
12. SPTBN1 ENSDARG00000102883 26 1.65 0.831 0.819 - - - - - - - spectrin, beta, non-erythrocytic 1 [Source:ZFIN;Acc:ZDB-GENE-031006-3]
13. CR931813.1 ENSDARG00000103293 84 1.601 0.879 0.722 - - - - - - -
14. PTGR2 ENSDARG00000070673 43 1.59 - - - - - 0.770 - - 0.820 prostaglandin reductase 2 [Source:ZFIN;Acc:ZDB-GENE-050506-71]
15. PEG3_11 PEG3_11 167 1.57 0.738 0.832 - - - - - - -
16. mpx ENSDARG00000019521 562 1.568 0.789 0.779 - - - - - - - myeloid-specific peroxidase [Source:ZFIN;Acc:ZDB-GENE-030131-9460]
17. thap7 ENSDARG00000070704 225 1.542 0.789 0.753 - - - - - - - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
18. muc13a ENSDARG00000069559 985 1.525 0.700 0.825 - - - - - - - mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
19. si:dkey-225f23.4 ENSDARG00000102520 86 1.523 - 0.819 - - - 0.704 - - - si:dkey-225f23.4 [Source:NCBI gene;Acc:100005326]
20. smyd4 ENSDARG00000060983 106 1.512 0.767 0.745 - - - - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
21. si:ch211-254n4.3 ENSDARG00000020292 85 1.461 0.715 0.746 - - - - - - - si:ch211-254n4.3 [Source:ZFIN;Acc:ZDB-GENE-081105-89]
22. pmvk ENSDARG00000070798, ENSDARG00000109348 76 1 - - - - - 1.000 - - - phosphomevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-070410-91]
23. tagapa ENSDARG00000002353 20 1 - - - - - 1.000 - - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
24. STPG2 ENSDARG00000061060 16 1 - - - - - 1.000 - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
25. nfil3-4 ENSDARG00000092346 3 1 - - - - - 1.000 - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
26. si:dkeyp-34a4.1 si:dkeyp-34a4.1 0 1 - - - - - 1.000 - - -
27. si:dkeyp-4f2.6 ENSDARG00000095596 3 1 - - - - - 1.000 - - - si:dkeyp-4f2.6 [Source:ZFIN;Acc:ZDB-GENE-110914-212]
28. BX000477.1 BX000477.1 1 1 - - - - - 1.000 - - -
29. drl ENSDARG00000078004 43 1 - - - - - 1.000 - - - draculin [Source:ZFIN;Acc:ZDB-GENE-991213-3]
30. si:dkey-285e18.3 si:dkey-285e18.3 10 1 - - - - - 1.000 - - -
31. epb41l3b ENSDARG00000019917 9 1 - - - - - 1.000 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
32. si:dkey-220o21.5 si:dkey-220o21.5 24 1 - - - - - 1.000 - - -
33. BX323796.1 BX323796.1 2 1 - - - - - 1.000 - - -
34. CABZ01074946.1 CABZ01074946.1 119 1 - - - - - 1.000 - - -
35. HPX ENSDARG00000012609 781 1 - - - - - 1.000 - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
36. si:dkey-24i24.3 ENSDARG00000088452 27 1 - - - - - 1.000 - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
37. U6_12 U6_12 0 1 - - - - - 1.000 - - -
38. tmem168b ENSDARG00000062168 17 1 - - - - - 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
39. RP1 ENSDARG00000077687 6 1 - - - - - 1.000 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
40. ggcta ENSDARG00000076406 33 1 - - - - - 1.000 - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
41. si:dkeyp-13d11.2 79 1 - - - - - 1.000 - - - si:dkeyp-13d11.2
42. si:dkey-8o9.6 si:dkey-8o9.6 0 1 - - - - - 1.000 - - -
43. col5a3b ENSDARG00000101816 56 1 - - - - - 1.000 - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
44. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 1 - - - - - 1.000 - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]
45. BX537113.1_1 BX537113.1_1 3 1 - - - - - 1.000 - - -
46. KBTBD3 ENSDARG00000060512 42 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
47. mcm3l ENSDARG00000037532, ENSDARG00000110461 7 1 - - - - - 1.000 - - - MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like [Source:ZFIN;Acc:ZDB-GENE-040121-2]
48. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - 1.000 - - -
49. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 1 - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
50. MEX3D MEX3D 293 1 - - - - - 1.000 - - -
51. si:ch211-59h6.1 ENSDARG00000013022 193 1 - - - - - 1.000 - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
52. si:ch211-126g16.8 3 1 - - - - - 1.000 - - - si:ch211-126g16.8, transcript variant X1
53. otx5 ENSDARG00000043483 282 1 - - - - - 1.000 - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
54. si:ch211-117i10.10 si:ch211-117i10.10 18 1 - - - - - 1.000 - - -
55. BX465203.1 ENSDARG00000113985 8 1 - - - - - 1.000 - - -
56. GMNC ENSDARG00000068719 28 1 - - - - - 1.000 - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
57. syne3 ENSDARG00000023237 23 1 - - - - - 1.000 - - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
58. PLEKHS1_1 PLEKHS1_1 23 1 - - - - - 1.000 - - -
59. si:dkey-117n7.2 ENSDARG00000093135 40 1 - - - - - 1.000 - - - si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
60. si:ch211-224b1.4 si:ch211-224b1.4 29 1 - - - - - 1.000 - - -
61. FUK ENSDARG00000032650 20 1 - - - - - 1.000 - - - fucokinase [Source:ZFIN;Acc:ZDB-GENE-110819-1]
62. SBSPON ENSDARG00000110160 2 1 - - - - - 1.000 - - - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
63. cacna1aa ENSDARG00000037905 4 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
64. fank1 ENSDARG00000039657 9 1 - - - - - 1.000 - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
65. BX321870.1 ENSDARG00000098519 9 1 - - - - - 1.000 - - -
66. c1ql3a ENSDARG00000010350 179 1 - - - - - 1.000 - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
67. si:dkey-103j14.5 ENSDARG00000002219 0 1 - - - - - 1.000 - - - si:dkey-103j14.5 [Source:ZFIN;Acc:ZDB-GENE-090313-170]
68. TTC29 ENSDARG00000058885, ENSDARG00000112776 1 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-100922-181]
69. crygs2 ENSDARG00000041171, ENSDARG00000111780 0 1 - - - - - 1.000 - - - crystallin, gamma S2 [Source:ZFIN;Acc:ZDB-GENE-050126-3]
70. zgc:165539 ENSDARG00000027639 20 1 - - - - - 1.000 - - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
71. CR848763.1 CR848763.1 9 1 - - - - - 1.000 - - -
72. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - - - 1.000 - - -
73. si:dkey-153k10.14 si:dkey-153k10.14 0 1 - - - - - 1.000 - - -
74. kcne4 ENSDARG00000068257 13 1 - - - - - 1.000 - - - potassium voltage-gated channel, Isk-related family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050419-163]
75. polk ENSDARG00000059963 5 1 - - - - - 1.000 - - - polymerase (DNA directed) kappa [Source:ZFIN;Acc:ZDB-GENE-060526-137]
76. IMPG2_1 IMPG2_1 2 1 - - - - - 1.000 - - -
77. LOXL2 LOXL2 2 1 - - - - - 1.000 - - -
78. CU861664.1 CU861664.1 53 1 - - - - - 1.000 - - -
79. mir142a 20 1 - - - - - 1.000 - - - microRNA 142a
80. SNORA81_1 SNORA81_1 8 1 - - - - - 1.000 - - -
81. CABZ01079981.1 CABZ01079981.1 8 1 - - - - - 1.000 - - -
82. oca2 ENSDARG00000061303 22 1 - - - - - 1.000 - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
83. cdk20 ENSDARG00000003867 27 1 - - - - - 1.000 - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
84. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - 1.000 - - -
85. si:dkey-88j15.4 ENSDARG00000079471 3 1 - - - - - 1.000 - - - si:dkey-88j15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-55]
86. zymnd12 17 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 12, transcript variant X1
87. sytl5 ENSDARG00000062135 11 1 - - - - - 1.000 - - - synaptotagmin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070912-424]
88. tpbgl ENSDARG00000114338 5 1 - - - - - 1.000 - - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
89. c6ast1 ENSDARG00000069216 8 1 - - - - - 1.000 - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
90. ftr76 ENSDARG00000076093 1 1 - - - - - 1.000 - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
91. AL929092.2 AL929092.2 0 1 - - - - - 1.000 - - -
92. msgn1 ENSDARG00000070546 188 1 - - - - - 1.000 - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
93. impact ENSDARG00000043288 7 1 - - - - - 1.000 - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
94. SNORA14 SNORA14 10 1 - - - - - 1.000 - - -
95. APP APP 0 1 - - - - - 1.000 - - -
96. ft2 ENSDARG00000109567 5 1 - - - - - 1.000 - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
97. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1 - - - - - 1.000 - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
98. itgb1b ENSDARG00000104484 51 1 - - - - - 1.000 - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
99. cx39.4 ENSDARG00000070357 17 1 - - - - - 1.000 - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
100. rab14l ENSDARG00000035188 18 1 - - - - - 1.000 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]

There are 926 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA