Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col6a3

Gene Name Gene ID Reads Annotation
col6a3 ENSDARG00000077139, ENSDARG00000095915 415 collagen, type VI, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070501-8]










Genes with expression patterns similar to col6a3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col6a3 ENSDARG00000077139, ENSDARG00000095915 415 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type VI, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070501-8]
2. HHIPL2 ENSDARG00000060008 162 1.673 0.886 - - - - - 0.787 - - HHIP-like 2 [Source:ZFIN;Acc:ZDB-GENE-131120-145]
3. snx29 ENSDARG00000077317 239 1.615 0.788 - - - - - 0.827 - - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
4. nlgn4a 102 1.577 0.807 - - - - - 0.770 - - neuroligin 4a, transcript variant X1
5. pik3cg ENSDARG00000017757 157 1.573 0.810 - - - - - 0.763 - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
6. CABZ01064069.1 CABZ01064069.1 219 1.56 0.787 - - - - 0.773 - - -
7. olfml2bb ENSDARG00000021480 256 1.551 0.804 - - - - - 0.747 - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
8. gfm2 ENSDARG00000005561 302 1.476 0.719 - - - - - 0.757 - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
9. mettl11b ENSDARG00000042033 176 1.46 0.760 - - - 0.700 - - - - methyltransferase like 11B [Source:ZFIN;Acc:ZDB-GENE-081104-175]
10. KIF21B ENSDARG00000009733 53 0.962 0.962 - - - - - - - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
11. mylk2 ENSDARG00000031698 135 0.943 0.943 - - - - - - - - myosin light chain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080616-2]
12. zgc:163143 ENSDARG00000076437 166 0.927 0.927 - - - - - - - - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
13. lactb ENSDARG00000040803 435 0.918 - - - - - - 0.918 - - lactamase, beta [Source:ZFIN;Acc:ZDB-GENE-020111-1]
14. med16 ENSDARG00000040779, ENSDARG00000116309 939 0.901 0.901 - - - - - - - - mediator complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-090306-4]
15. slc1a7a ENSDARG00000034940 149 0.891 0.891 - - - - - - - - solute carrier family 1 (glutamate transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-061009-24]
16. FAM26E FAM26E 79 0.891 0.891 - - - - - - - -
17. NAPB_1 NAPB_1 33 0.891 0.891 - - - - - - - -
18. alg2 ENSDARG00000070399 772 0.89 0.890 - - - - - - - - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
19. nudt19 ENSDARG00000077537 131 0.886 - - - - - - 0.886 - - nudix (nucleoside diphosphate linked moiety X)-type motif 19 [Source:ZFIN;Acc:ZDB-GENE-081022-80]
20. ankfy1 ENSDARG00000061013, ENSDARG00000111387 952 0.883 0.883 - - - - - - - - ankyrin repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041222-1]
21. mapk8b ENSDARG00000009870 295 0.882 0.882 - - - - - - - - mitogen-activated protein kinase 8b [Source:ZFIN;Acc:ZDB-GENE-010202-1]
22. gabbr2 ENSDARG00000061042 122 0.882 0.882 - - - - - - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:ZFIN;Acc:ZDB-GENE-060503-620]
23. igfbp2b ENSDARG00000031422 679 0.875 - 0.875 - - - - - - - insulin-like growth factor binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-090107-3]
24. lrp11 ENSDARG00000034076 313 0.873 0.873 - - - - - - - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
25. TUB ENSDARG00000062165, ENSDARG00000111083 871 0.87 0.870 - - - - - - - - tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
26. PARP14 PARP14 164 0.867 0.867 - - - - - - - -
27. CT583625.2 ENSDARG00000094770 57 0.867 0.867 - - - - - - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
28. ANXA9 ANXA9 74 0.865 - - - - - - 0.865 - -
29. AEBP1 ENSDARG00000091726 1431 0.863 - - - - - - - 0.863 - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
30. DPEP3 DPEP3 53 0.863 0.863 - - - - - - - -
31. si:ch211-269i23.2 432 0.859 - - - - - - 0.859 - - si:ch211-269i23.2, transcript variant X3
32. zgc:158614 zgc:158614 312 0.858 0.858 - - - - - - - -
33. sdad1 ENSDARG00000105117 2819 0.858 - - - - - - 0.858 - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
34. mfsd2aa ENSDARG00000030630 66 0.854 0.854 - - - - - - - - major facilitator superfamily domain containing 2aa [Source:ZFIN;Acc:ZDB-GENE-041114-166]
35. epn2 ENSDARG00000008377 5458 0.849 - - - - - - 0.849 - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
36. si:dkey-93m18.3 ENSDARG00000092664 30 0.848 0.848 - - - - - - - - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
37. si:dkey-266m15.6 ENSDARG00000078508 490 0.848 - - - - - - 0.848 - - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
38. gorasp2 ENSDARG00000015126 3923 0.847 - - - - - - 0.847 - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
39. cabp2b ENSDARG00000052277 119 0.847 0.847 - - - - - - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
40. C9H3orf38 C9H3orf38 83 0.846 0.846 - - - - - - - -
41. CCNJ ENSDARG00000059917 115 0.846 0.846 - - - - - - - - cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
42. specc1 ENSDARG00000029480 54 0.846 0.846 - - - - - - - - sperm antigen with calponin homology and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-060526-207]
43. magi1a ENSDARG00000070145 547 0.845 0.845 - - - - - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
44. nrd1 nrd1 324 0.844 0.844 - - - - - - - -
45. dtnbb ENSDARG00000013020 280 0.843 - - 0.843 - - - - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
46. mitd1 ENSDARG00000044766 182 0.842 0.842 - - - - - - - - MIT, microtubule interacting and transport, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-923]
47. hdac6 ENSDARG00000008384 144 0.842 0.842 - - - - - - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
48. ccrl1b ccrl1b 154 0.842 - - - - - - 0.842 - -
49. babam1 ENSDARG00000077526 776 0.842 - - - - - - 0.842 - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
50. TMEM138 ENSDARG00000090543 105 0.841 - 0.841 - - - - - - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
51. SORT1 SORT1 33 0.84 0.840 - - - - - - - -
52. DSN1 ENSDARG00000089922 269 0.84 0.840 - - - - - - - - DSN1 homolog, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-170110-2]
53. ppp1r8 ppp1r8 310 0.839 0.839 - - - - - - - -
54. samd1b ENSDARG00000079062 280 0.838 0.838 - - - - - - - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
55. CU207301.4 CU207301.4 192 0.837 - - - - - - 0.837 - -
56. polg2 ENSDARG00000074933 117 0.836 0.836 - - - - - - - - polymerase (DNA directed), gamma 2, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060810-116]
57. sdhaf1 ENSDARG00000092478 51 0.835 0.835 - - - - - - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
58. fam26f 595 0.834 0.834 - - - - - - - - family with sequence similarity 26, member F
59. lctlb ENSDARG00000016337 35 0.834 0.834 - - - - - - - - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
60. nefla ENSDARG00000057568 62 0.834 0.834 - - - - - - - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
61. XCR1 XCR1 9 0.834 0.834 - - - - - - - -
62. si:ch211-271e10.1 ENSDARG00000095735 15 0.834 0.834 - - - - - - - - si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
63. si:ch211-179l5.6 si:ch211-179l5.6 33 0.834 0.834 - - - - - - - -
64. si:ch73-303g23.4 si:ch73-303g23.4 386 0.834 0.834 - - - - - - - -
65. RAP1GAP2 RAP1GAP2 52 0.834 0.834 - - - - - - - -
66. urgcp ENSDARG00000036767 6 0.834 0.834 - - - - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
67. avpr2aa ENSDARG00000007436 43 0.834 0.834 - - - - - - - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
68. sema4ga ENSDARG00000076595 24 0.834 0.834 - - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ga [Source:ZFIN;Acc:ZDB-GENE-060503-381]
69. SLC7A8 SLC7A8 25 0.834 0.834 - - - - - - - -
70. zgc:172133 ENSDARG00000075248 6 0.834 0.834 - - - - - - - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
71. foxp3a ENSDARG00000055750 15 0.834 0.834 - - - - - - - - forkhead box P3a [Source:ZFIN;Acc:ZDB-GENE-061116-2]
72. si:ch73-91k6.1 18 0.834 0.834 - - - - - - - - si:ch73-91k6.1
73. entpd8 ENSDARG00000005565 18 0.834 0.834 - - - - - - - - ectonucleoside triphosphate diphosphohydrolase 8 [Source:ZFIN;Acc:ZDB-GENE-040724-142]
74. igfbp5a ENSDARG00000039264, ENSDARG00000111203 117 0.834 0.834 - - - - - - - - insulin-like growth factor binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-070620-8]
75. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 0.834 0.834 - - - - - - - - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
76. atoh1b ENSDARG00000099564 494 0.834 0.834 - - - - - - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
77. BX511271.1 BX511271.1 22 0.834 0.834 - - - - - - - -
78. ush1c ENSDARG00000051876, ENSDARG00000112799 25 0.834 0.834 - - - - - - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
79. CABZ01060296.1 CABZ01060296.1 9 0.834 0.834 - - - - - - - -
80. cldn11a ENSDARG00000020031 284 0.834 0.834 - - - - - - - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
81. zzef1 ENSDARG00000094380 4 0.834 0.834 - - - - - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
82. CU856140.1 CU856140.1 4316 0.834 0.834 - - - - - - - -
83. pcsk5a ENSDARG00000067537 44 0.834 0.834 - - - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
84. tmtc4 ENSDARG00000020447 873 0.834 - - - - - - 0.834 - - transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
85. C3H17orf104 C3H17orf104 16 0.834 0.834 - - - - - - - -
86. si:dkey-47k20.8 ENSDARG00000035214 4 0.834 0.834 - - - - - - - - si:dkey-47k20.8 [Source:ZFIN;Acc:ZDB-GENE-060503-359]
87. CU694807.2 CU694807.2 5 0.834 0.834 - - - - - - - -
88. atoh1c ENSDARG00000039602 4 0.834 0.834 - - - - - - - - atonal bHLH transcription factor 1c [Source:ZFIN;Acc:ZDB-GENE-090805-1]
89. si:ch211-204c5.6 si:ch211-204c5.6 7 0.834 0.834 - - - - - - - -
90. C11H3orf14 C11H3orf14 15 0.834 0.834 - - - - - - - -
91. trim62 ENSDARG00000060901 12 0.834 0.834 - - - - - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
92. cd79b ENSDARG00000104691 5 0.834 0.834 - - - - - - - - CD79b molecule, immunoglobulin-associated beta [Source:ZFIN;Acc:ZDB-GENE-121219-1]
93. CABZ01059408.1 ENSDARG00000116928 24 0.834 0.834 - - - - - - - -
94. TMEM230 TMEM230 351 0.834 0.834 - - - - - - - -
95. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 0.834 0.834 - - - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
96. si:dkeyp-9d4.2 ENSDARG00000029720 9 0.834 0.834 - - - - - - - - si:dkeyp-9d4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-156]
97. ptger1b ENSDARG00000104847 91 0.834 0.834 - - - - - - - - prostaglandin E receptor 1b (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-100922-278]
98. Vault_1 Vault_1 6 0.834 0.834 - - - - - - - -
99. si:ch211-161h7.8 ENSDARG00000089919 60 0.834 0.834 - - - - - - - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
100. CR631122.1 ENSDARG00000044534 8 0.834 0.834 - - - - - - - - protein RD3-like [Source:NCBI gene;Acc:100149591]

There are 523 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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