Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col6a2

Gene Name Gene ID Reads Annotation
col6a2 ENSDARG00000061436 5063 collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]










Genes with expression patterns similar to col6a2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col6a2 ENSDARG00000061436 5063 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
2. ptplb ptplb 6135 3.177 - 0.768 - - - 0.746 0.738 - 0.925
3. irf2bp2a ENSDARG00000004702 6719 2.388 - 0.700 - - - - 0.785 - 0.903 interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
4. eci1 ENSDARG00000018002 2141 2.283 - 0.769 - - - 0.775 0.739 - - enoyl-CoA delta isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6033]
5. ptbp1a ENSDARG00000019362 6290 2.211 - 0.750 - - - 0.746 0.715 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
6. CABZ01044136.1 CABZ01044136.1 2596 1.834 - 0.887 - - - - - - 0.947
7. arpc1a ENSDARG00000008383 7353 1.777 - 0.826 - - - - - - 0.951 actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
8. ago3b ENSDARG00000063079 1441 1.742 - 0.794 - - - - - - 0.948 argonaute RISC catalytic component 3b [Source:ZFIN;Acc:ZDB-GENE-060503-452]
9. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.719 - 0.783 - - - - - - 0.936 cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
10. ppap2c ppap2c 1361 1.712 - 0.762 - - - - - - 0.950
11. PELP1 ENSDARG00000079313 5771 1.703 0.739 - - - - - - - 0.964 proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
12. antxr1c ENSDARG00000063612 3203 1.673 - - - - - - 0.703 - 0.970 ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
13. CABZ01092303.1 CABZ01092303.1 8825 1.673 - - - - - 0.853 0.820 - -
14. sav1 ENSDARG00000006196 1201 1.672 - - - - - 0.811 0.861 - - salvador family WW domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-040912-28]
15. TMEM87A TMEM87A 2407 1.672 - - - - - 0.723 - - 0.949
16. btbd10b ENSDARG00000020252 7251 1.665 - - - - - 0.706 - - 0.959 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
17. psat1 ENSDARG00000016733 8084 1.659 - - - - - 0.736 - - 0.923 phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
18. fam160a2 ENSDARG00000078188 546 1.656 0.907 0.749 - - - - - - - family with sequence similarity 160, member A2 [Source:ZFIN;Acc:ZDB-GENE-070912-291]
19. ENSDARG00000058255 ENSDARG00000058255 1715 1.654 - 0.708 - - - - - - 0.946
20. ISM2 ISM2 1710 1.653 - 0.704 - - - - - - 0.949
21. fn1 fn1 2538 1.648 - 0.805 - - - 0.843 - - -
22. CU928061.2 CU928061.2 4550 1.647 - 0.710 - - - - - - 0.937
23. exosc1 ENSDARG00000059841 6895 1.646 - 0.848 - - - 0.798 - - - exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
24. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.64 - 0.731 - - - - - - 0.909 ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
25. PCOLCE_1 PCOLCE_1 2148 1.637 - - - - - 0.727 - - 0.910
26. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.626 - 0.776 - - - 0.850 - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
27. sdc4 ENSDARG00000059906 10105 1.604 - 0.871 - - - - 0.733 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
28. srrm2 ENSDARG00000037965 1967 1.603 0.752 0.851 - - - - - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
29. rab13 ENSDARG00000034771 3065 1.591 - 0.748 - - - - 0.843 - - RAB13, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-30]
30. pgrmc1 ENSDARG00000054172 5423 1.573 - 0.786 - - - 0.787 - - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
31. ctnnb1 ENSDARG00000014571 12004 1.573 - 0.849 - - - 0.724 - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
32. fkbp9 ENSDARG00000005023 17518 1.571 - 0.811 - - - 0.760 - - - FK506 binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-040801-23]
33. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.57 - 0.808 - - - 0.762 - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
34. dazap2 ENSDARG00000007867 1805 1.557 - 0.777 - - - - 0.780 - - DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
35. CU694219.1 CU694219.1 699 1.555 - 0.780 - - - 0.775 - - -
36. cited4a ENSDARG00000035990 2762 1.554 - 0.823 - - - - 0.731 - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a [Source:ZFIN;Acc:ZDB-GENE-030131-7661]
37. si:dkeyp-67e6.4 si:dkeyp-67e6.4 3680 1.553 0.780 - - - - 0.773 - - -
38. DYNC1I2 DYNC1I2 4131 1.553 - 0.752 - - - 0.801 - - -
39. grb10a ENSDARG00000002013 1349 1.549 - - - - - 0.825 0.724 - - growth factor receptor-bound protein 10a [Source:ZFIN;Acc:ZDB-GENE-040822-32]
40. slc38a5b ENSDARG00000014587 8461 1.547 - 0.836 - - - - 0.711 - - solute carrier family 38, member 5b [Source:ZFIN;Acc:ZDB-GENE-040718-395]
41. anxa4 ENSDARG00000036456 3332 1.545 - 0.823 - - - 0.722 - - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
42. itgb1b.1 ENSDARG00000053232 4721 1.534 - 0.746 - - - 0.788 - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
43. CT573389.2 CT573389.2 1183 1.527 - 0.780 - - - 0.747 - - -
44. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.524 - 0.716 - - - 0.808 - - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
45. mllt4 mllt4 2939 1.524 - - - - - 0.752 0.772 - -
46. duox ENSDARG00000062632 1406 1.523 0.805 - - - - 0.718 - - - dual oxidase [Source:ZFIN;Acc:ZDB-GENE-091117-14]
47. pank1a ENSDARG00000008192, ENSDARG00000110385, ENSDARG00000113933 913 1.519 - 0.709 - - - 0.810 - - - pantothenate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2846]
48. gng5 ENSDARG00000039830 12102 1.517 - - - - - 0.778 0.739 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
49. cyfip1 ENSDARG00000044345 5483 1.513 - 0.755 - - - 0.758 - - - cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
50. fam89a ENSDARG00000079979 4375 1.508 - 0.752 - - - 0.756 - - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
51. letm2 ENSDARG00000077515 9561 1.506 - 0.775 - - - 0.731 - - - leucine zipper-EF-hand containing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-090521-4]
52. rhbdf1 rhbdf1 1608 1.505 - 0.763 - - - 0.742 - - -
53. tax1bp1b ENSDARG00000056856 4526 1.504 - - - - - 0.758 0.746 - - Tax1 (human T-cell leukemia virus type I) binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2872]
54. aldh6a1 ENSDARG00000053485 7744 1.501 - 0.726 - - - 0.775 - - - aldehyde dehydrogenase 6 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-9192]
55. wls ENSDARG00000009534 8719 1.496 - - - - - 0.721 0.775 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
56. eefsec ENSDARG00000004696 791 1.495 0.739 0.756 - - - - - - - eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
57. ACVR1B ACVR1B 4824 1.494 - - - - - 0.714 0.780 - -
58. plxnb2a ENSDARG00000003811, ENSDARG00000094799 1662 1.494 - - - - - 0.766 0.728 - - plexin b2a [Source:ZFIN;Acc:ZDB-GENE-030131-8917]
59. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.493 - 0.737 - - - 0.756 - - - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
60. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 1.491 - 0.747 - - - 0.744 - - - regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
61. arhgef1b ENSDARG00000055837 2330 1.486 - - - - - 0.716 0.770 - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
62. cpne3 ENSDARG00000104177, ENSDARG00000109906, ENSDARG00000110868 1084 1.486 - 0.750 - - - - 0.736 - - copine III [Source:ZFIN;Acc:ZDB-GENE-040426-763]
63. RNF145_1 RNF145_1 835 1.482 - 0.704 - - - 0.778 - - -
64. serinc2 ENSDARG00000056532 1406 1.481 - 0.746 - - - - 0.735 - - serine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
65. agpat4 ENSDARG00000069044 4487 1.48 - 0.743 - - - - 0.737 - - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
66. zc3h7b 2936 1.479 - 0.735 - - - 0.744 - - - zinc finger CCCH-type containing 7B
67. bet1l ENSDARG00000032037 1477 1.478 - 0.761 - - - 0.717 - - - Bet1 golgi vesicular membrane trafficking protein-like [Source:ZFIN;Acc:ZDB-GENE-040822-2]
68. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.474 - 0.711 - - - 0.763 - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
69. si:ch73-138n13.1 ENSDARG00000075349 4411 1.472 - 0.746 - - - 0.726 - - - si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]
70. bambib ENSDARG00000099677 4267 1.47 - 0.743 - - - 0.727 - - - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
71. atp2b1a ENSDARG00000012684 4673 1.468 - - - - - 0.740 0.728 - - ATPase plasma membrane Ca2+ transporting 1a [Source:ZFIN;Acc:ZDB-GENE-030925-29]
72. ctnna1 ENSDARG00000102441 7984 1.466 - 0.761 - - - - 0.705 - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
73. eif4ebp2 ENSDARG00000031819 13168 1.466 0.715 - - - - 0.751 - - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
74. ppp2r1a ppp2r1a 11291 1.46 - 0.713 - - - - 0.747 - -
75. srgap2a srgap2a 7197 1.458 - 0.715 - - - - 0.743 - -
76. asap2b ENSDARG00000019564 1660 1.458 0.705 0.753 - - - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
77. trim71 ENSDARG00000075593 2750 1.453 - 0.707 - - - 0.746 - - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
78. wu:fj05h12 wu:fj05h12 6166 1.448 - 0.718 - - - 0.730 - - -
79. tmem248 ENSDARG00000018825 1560 1.447 - 0.709 - - - - 0.738 - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
80. C19H1orf51 C19H1orf51 1776 1.446 - 0.727 - - - - 0.719 - -
81. PAPD5 2090 1.446 0.707 - - - - - 0.739 - - PAP associated domain containing 5, transcript variant X1
82. rftn2 ENSDARG00000056078 1449 1.446 - - - - - 0.718 0.728 - - raftlin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2760]
83. cldnh ENSDARG00000069503 2410 1.445 - 0.745 - - - - 0.700 - - claudin h [Source:ZFIN;Acc:ZDB-GENE-010328-8]
84. CU571162.1 CU571162.1 652 1.44 0.716 - - - - 0.724 - - -
85. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.438 - - - - - 0.720 0.718 - - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
86. dennd5b ENSDARG00000003789 1152 1.436 - 0.710 - - - 0.726 - - - DENN/MADD domain containing 5B [Source:ZFIN;Acc:ZDB-GENE-030131-2248]
87. dpm2 ENSDARG00000095623, ENSDARG00000115283 981 1.427 - - - - - 0.720 0.707 - - dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9093]
88. ctps1a ENSDARG00000030700 3868 1.423 - 0.719 - - - 0.704 - - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
89. adipor2 ENSDARG00000101849 3156 1.421 - - - - - 0.720 0.701 - - adiponectin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-60]
90. dap1b ENSDARG00000086842, ENSDARG00000109678 2464 1.419 - - - - - 0.715 0.704 - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
91. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.418 - 0.717 - - - - 0.701 - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
92. tm9sf4 ENSDARG00000002536 1684 1.416 - 0.713 - - - - 0.703 - - transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
93. myo1c myo1c 4978 0.973 - - - - - - - - 0.973
94. gpia ENSDARG00000012987 4624 0.967 - - - - - - - - 0.967 glucose-6-phosphate isomerase a [Source:ZFIN;Acc:ZDB-GENE-020513-2]
95. zc3h18 ENSDARG00000062506 1676 0.964 - - - - - - - - 0.964 zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
96. smo ENSDARG00000002952 6411 0.964 - - - - - - - - 0.964 smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
97. spen ENSDARG00000074245, ENSDARG00000116696 3054 0.963 - - - - - - - - 0.963 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
98. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 0.962 - - - - - - - - 0.962 zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]
99. hapln1a ENSDARG00000089769 12334 0.96 - - - - - - - - 0.960 hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
100. atp6v1h ENSDARG00000006370 7028 0.958 - - - - - - - - 0.958 ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]

There are 1204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA