Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col5a3b

Gene Name Gene ID Reads Annotation
col5a3b ENSDARG00000101816 56 collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]










Genes with expression patterns similar to col5a3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col5a3b ENSDARG00000101816 56 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
2. cacna2d2 cacna2d2 16 2.763 - - - 1.000 0.946 - 0.817 - -
3. tmem168b ENSDARG00000062168 17 2 - 1.000 - - - 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
4. cx39.4 ENSDARG00000070357 17 2 - - - 1.000 - 1.000 - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
5. PCBP3 ENSDARG00000054378 17 1.969 - - - 1.000 0.969 - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
6. rc3h2 ENSDARG00000063050 7 1.936 - - - - - 1.000 0.936 - - ring finger and CCCH-type domains 2 [Source:ZFIN;Acc:ZDB-GENE-060503-694]
7. palmda ENSDARG00000001913 26 1.908 - 0.908 - 1.000 - - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
8. supt7l ENSDARG00000013461 41 1.848 - - - 0.848 - 1.000 - - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
9. nceh1a ENSDARG00000020427 35 1.837 - - - - 0.837 1.000 - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
10. ft2 ENSDARG00000109567 5 1.812 0.812 - - - - 1.000 - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
11. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1.773 0.812 - - 0.961 - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
12. ehf ENSDARG00000052115, ENSDARG00000112589 24 1.755 - - - - - 1.000 0.755 - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
13. si:dkey-2j6.2 si:dkey-2j6.2 5 1.751 - - - - - 1.000 - 0.751 -
14. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 1.744 0.744 - - - - 1.000 - - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
15. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1.737 - 0.799 - - 0.938 - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
16. MFAP4 ENSDARG00000090783 8 1.725 - 0.908 - - - - 0.817 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
17. cryba1l1 ENSDARG00000032929 1868 1.723 0.723 - - - - 1.000 - - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
18. SLC7A1 ENSDARG00000016439, ENSDARG00000115084 54 1.723 - - - 0.723 - - 1.000 - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
19. rasal3 ENSDARG00000089933 17 1.721 0.812 - - 0.909 - - - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
20. BX957278.1_1 ENSDARG00000010940 9 1.721 - - - - 0.970 - - 0.751 -
21. cox5b2 ENSDARG00000068738 182 1.721 0.776 - - - 0.945 - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
22. si:dkeyp-73d8.8 ENSDARG00000094045 17 1.714 0.812 - - - - - - 0.902 - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
23. fastkd3 ENSDARG00000100440 144 1.669 0.862 0.807 - - - - - - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
24. gdpd3b ENSDARG00000006944 19 1.65 - - - - 0.908 0.742 - - - glycerophosphodiester phosphodiesterase domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-121210-2]
25. FNDC3A ENSDARG00000105503 11 1.616 - 0.799 - - - - 0.817 - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
26. TEKT4 ENSDARG00000028899 47 1.6 0.711 - - - - 0.889 - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
27. si:rp71-17i16.6 ENSDARG00000095453 167 1.589 - - - - 0.834 0.755 - - - si:rp71-17i16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-410]
28. si:ch211-57m13.10 ENSDARG00000095902 1 1.568 - - - - - - 0.817 0.751 - si:ch211-57m13.10 [Source:ZFIN;Acc:ZDB-GENE-110411-264]
29. spata2l ENSDARG00000068814 152 1.559 - 0.815 - - 0.744 - - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
30. si:dkey-241l7.10 si:dkey-241l7.10 38 1.558 - - - - - 0.741 0.817 - -
31. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1.557 0.812 - - - - - 0.745 - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
32. CABZ01071446.1 CABZ01071446.1 4 1.54 0.723 - - - - - 0.817 - -
33. drd2b ENSDARG00000011091, ENSDARG00000111351 130 1.539 - 0.736 - - - - 0.803 - - dopamine receptor D2b [Source:ZFIN;Acc:ZDB-GENE-030910-2]
34. ptprja ENSDARG00000033042 25 1.525 - - - - - 0.708 0.817 - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
35. klhl38 klhl38 44 1.515 - 0.807 - - - - 0.708 - -
36. itpr1a ENSDARG00000014655, ENSDARG00000117119 151 1.502 0.719 - - - 0.783 - - - - inositol 1,4,5-trisphosphate receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070604-3]
37. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.479 - - - - 0.771 - 0.708 - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
38. pi15a ENSDARG00000045378 2361 1.472 - 0.729 - - - - 0.743 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
39. col5a3a_1 ENSDARG00000098294 271 1.468 - 0.735 - - - - 0.733 - - collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]
40. isg20l2 ENSDARG00000102266 167 1.436 0.712 - - - 0.724 - - - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
41. si:dkey-103j14.5 ENSDARG00000002219 0 1 - - - - - 1.000 - - - si:dkey-103j14.5 [Source:ZFIN;Acc:ZDB-GENE-090313-170]
42. sult1st8 sult1st8 6 1 - - - - - 1.000 - - -
43. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - 1.000 - - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
44. axdnd1 ENSDARG00000062355 30 1 - - - - - 1.000 - - - axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
45. sema6e ENSDARG00000000189 35 1 - - - - - 1.000 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
46. ATP13A5 ATP13A5 13 1 - - - 1.000 - - - - -
47. zgc:112242 11 1 - - - 1.000 - - - - - zgc:112242
48. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1 - - - - - 1.000 - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
49. si:dkey-257e4.2 si:dkey-257e4.2 0 1 - - - - - 1.000 - - -
50. CABZ01074946.1 CABZ01074946.1 119 1 - - - - - 1.000 - - -
51. si:dkey-4j21.1 17 1 - - - - - 1.000 - - - si:dkey-4j21.1, transcript variant X2
52. zgc:171500 ENSDARG00000071553 2 1 - - - - - 1.000 - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
53. rilpl1 0 1 - - - - - 1.000 - - - Rab interacting lysosomal protein-like 1
54. si:ch211-117i10.10 si:ch211-117i10.10 18 1 - - - - - 1.000 - - -
55. CT573468.1 CT573468.1 283 1 - - - - - 1.000 - - -
56. BX323876.2 ENSDARG00000104577 62 1 - - - - - 1.000 - - -
57. si:dkeyp-80d11.4 ENSDARG00000103254 13 1 - - - - - 1.000 - - - si:dkeyp-80d11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-184]
58. OMA1 ENSDARG00000090503 19 1 - - - - - 1.000 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
59. syne3 ENSDARG00000023237 23 1 - - - - - 1.000 - - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
60. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1 - - - - - 1.000 - - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
61. ZBTB32 ENSDARG00000073726 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
62. CABZ01053592.1 ENSDARG00000117388 6 1 - - - - - 1.000 - - -
63. BX000477.1 BX000477.1 1 1 - - - - - 1.000 - - -
64. CU302326.3 CU302326.3 6 1 - - - - - 1.000 - - -
65. si:dkeyp-4f2.6 ENSDARG00000095596 3 1 - - - - - 1.000 - - - si:dkeyp-4f2.6 [Source:ZFIN;Acc:ZDB-GENE-110914-212]
66. BX537113.1_1 BX537113.1_1 3 1 - - - - - 1.000 - - -
67. stm ENSDARG00000035694 1567 1 - - - - - 1.000 - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
68. HPX ENSDARG00000012609 781 1 - - - - - 1.000 - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
69. ftr76 ENSDARG00000076093 1 1 - - - - - 1.000 - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
70. BX571823.5 BX571823.5 4 1 - - - 1.000 - - - - -
71. BX321875.5_1 BX321875.5_1 0 1 - - - - - 1.000 - - -
72. oca2 ENSDARG00000061303 22 1 - - - - - 1.000 - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
73. PLEKHS1_1 PLEKHS1_1 23 1 - - - - - 1.000 - - -
74. si:dkey-8o9.6 si:dkey-8o9.6 0 1 - - - - - 1.000 - - -
75. RECK ENSDARG00000090039 15 1 - - - - - 1.000 - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
76. polk ENSDARG00000059963 5 1 - - - - - 1.000 - - - polymerase (DNA directed) kappa [Source:ZFIN;Acc:ZDB-GENE-060526-137]
77. msgn1 ENSDARG00000070546 188 1 - - - - - 1.000 - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
78. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 1 - - - 1.000 - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
79. AL929092.2 AL929092.2 0 1 - - - - - 1.000 - - -
80. si:dkey-192l18.9 ENSDARG00000077878 10 1 - - - - - 1.000 - - - si:dkey-192l18.9 [Source:ZFIN;Acc:ZDB-GENE-120709-25]
81. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1 - - - - - 1.000 - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
82. SNORA81_1 SNORA81_1 8 1 - - - - - 1.000 - - -
83. si:dkey-153k10.14 si:dkey-153k10.14 0 1 - - - - - 1.000 - - -
84. zgc:55413 79 1 - - - - - 1.000 - - - zgc:55413
85. crygs2 ENSDARG00000041171, ENSDARG00000111780 0 1 - - - - - 1.000 - - - crystallin, gamma S2 [Source:ZFIN;Acc:ZDB-GENE-050126-3]
86. scn1a 8 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
87. cdk20 ENSDARG00000003867 27 1 - - - - - 1.000 - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
88. pmvk ENSDARG00000070798, ENSDARG00000109348 76 1 - - - - - 1.000 - - - phosphomevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-070410-91]
89. zgc:123060_1 5 1 - - - - - 1.000 - - - zgc:123060
90. hist2h3c_1 ENSDARG00000094154 45 1 - - - - - 1.000 - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
91. FUK ENSDARG00000032650 20 1 - - - - - 1.000 - - - fucokinase [Source:ZFIN;Acc:ZDB-GENE-110819-1]
92. mcm3l ENSDARG00000037532, ENSDARG00000110461 7 1 - - - - - 1.000 - - - MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like [Source:ZFIN;Acc:ZDB-GENE-040121-2]
93. fgf10b ENSDARG00000100475 17 1 - - - - - 1.000 - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
94. SPTBN4 ENSDARG00000092624 6 1 - - - - - 1.000 - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
95. RBBP6_8 RBBP6_8 10 1 - - - - - 1.000 - - -
96. pwwp2b ENSDARG00000101080 138 1 - - - - - 1.000 - - - PWWP domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110930-2]
97. zymnd12 17 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 12, transcript variant X1
98. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - 1.000 - - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
99. nfil3-4 ENSDARG00000092346 3 1 - - - - - 1.000 - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
100. SLC39A11 ENSDARG00000098194 23 1 - - - - - 1.000 - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]

There are 866 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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