Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col5a3b

Gene Name Gene ID Reads Annotation
col5a3b ENSDARG00000101816 56 collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]










Genes with expression patterns similar to col5a3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col5a3b ENSDARG00000101816 56 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
2. cacna2d2 cacna2d2 16 2.763 - - - 1.000 0.946 - 0.817 - -
3. cx39.4 ENSDARG00000070357 17 2 - - - 1.000 - 1.000 - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
4. tmem168b ENSDARG00000062168 17 2 - 1.000 - - - 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
5. PCBP3 ENSDARG00000054378 17 1.969 - - - 1.000 0.969 - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
6. rc3h2 ENSDARG00000063050 7 1.936 - - - - - 1.000 0.936 - - ring finger and CCCH-type domains 2 [Source:ZFIN;Acc:ZDB-GENE-060503-694]
7. palmda ENSDARG00000001913 26 1.908 - 0.908 - 1.000 - - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
8. supt7l ENSDARG00000013461 41 1.848 - - - 0.848 - 1.000 - - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
9. nceh1a ENSDARG00000020427 35 1.837 - - - - 0.837 1.000 - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
10. ft2 ENSDARG00000109567 5 1.812 0.812 - - - - 1.000 - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
11. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1.773 0.812 - - 0.961 - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
12. ehf ENSDARG00000052115, ENSDARG00000112589 24 1.755 - - - - - 1.000 0.755 - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
13. si:dkey-2j6.2 si:dkey-2j6.2 5 1.751 - - - - - 1.000 - 0.751 -
14. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 1.744 0.744 - - - - 1.000 - - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
15. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1.737 - 0.799 - - 0.938 - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
16. MFAP4 ENSDARG00000090783 8 1.725 - 0.908 - - - - 0.817 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
17. cryba1l1 ENSDARG00000032929 1868 1.723 0.723 - - - - 1.000 - - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
18. SLC7A1 ENSDARG00000016439, ENSDARG00000115084 54 1.723 - - - 0.723 - - 1.000 - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
19. rasal3 ENSDARG00000089933 17 1.721 0.812 - - 0.909 - - - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
20. BX957278.1_1 ENSDARG00000010940 9 1.721 - - - - 0.970 - - 0.751 -
21. cox5b2 ENSDARG00000068738 182 1.721 0.776 - - - 0.945 - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
22. si:dkeyp-73d8.8 ENSDARG00000094045 17 1.714 0.812 - - - - - - 0.902 - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
23. fastkd3 ENSDARG00000100440 144 1.669 0.862 0.807 - - - - - - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
24. gdpd3b ENSDARG00000006944 19 1.65 - - - - 0.908 0.742 - - - glycerophosphodiester phosphodiesterase domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-121210-2]
25. FNDC3A ENSDARG00000105503 11 1.616 - 0.799 - - - - 0.817 - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
26. TEKT4 ENSDARG00000028899 47 1.6 0.711 - - - - 0.889 - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
27. si:rp71-17i16.6 ENSDARG00000095453 167 1.589 - - - - 0.834 0.755 - - - si:rp71-17i16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-410]
28. si:ch211-57m13.10 ENSDARG00000095902 1 1.568 - - - - - - 0.817 0.751 - si:ch211-57m13.10 [Source:ZFIN;Acc:ZDB-GENE-110411-264]
29. spata2l ENSDARG00000068814 152 1.559 - 0.815 - - 0.744 - - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
30. si:dkey-241l7.10 si:dkey-241l7.10 38 1.558 - - - - - 0.741 0.817 - -
31. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1.557 0.812 - - - - - 0.745 - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
32. CABZ01071446.1 CABZ01071446.1 4 1.54 0.723 - - - - - 0.817 - -
33. drd2b ENSDARG00000011091, ENSDARG00000111351 130 1.539 - 0.736 - - - - 0.803 - - dopamine receptor D2b [Source:ZFIN;Acc:ZDB-GENE-030910-2]
34. ptprja ENSDARG00000033042 25 1.525 - - - - - 0.708 0.817 - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
35. klhl38 klhl38 44 1.515 - 0.807 - - - - 0.708 - -
36. itpr1a ENSDARG00000014655, ENSDARG00000117119 151 1.502 0.719 - - - 0.783 - - - - inositol 1,4,5-trisphosphate receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070604-3]
37. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.479 - - - - 0.771 - 0.708 - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
38. pi15a ENSDARG00000045378 2361 1.472 - 0.729 - - - - 0.743 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
39. col5a3a_1 ENSDARG00000098294 271 1.468 - 0.735 - - - - 0.733 - - collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]
40. isg20l2 ENSDARG00000102266 167 1.436 0.712 - - - 0.724 - - - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
41. si:ch211-207e19.16 si:ch211-207e19.16 3 1 - - - 1.000 - - - - -
42. tagapa ENSDARG00000002353 20 1 - - - - - 1.000 - - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
43. si:dkey-114b16.5 si:dkey-114b16.5 5 1 - - - - - 1.000 - - -
44. crygs2 ENSDARG00000041171, ENSDARG00000111780 0 1 - - - - - 1.000 - - - crystallin, gamma S2 [Source:ZFIN;Acc:ZDB-GENE-050126-3]
45. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1 - - - - - - 1.000 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
46. epb41l3b ENSDARG00000019917 9 1 - - - - - 1.000 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
47. zymnd12 17 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 12, transcript variant X1
48. BX571823.5 BX571823.5 4 1 - - - 1.000 - - - - -
49. IMPG2_1 IMPG2_1 2 1 - - - - - 1.000 - - -
50. tnnc1a ENSDARG00000011400 165 1 - - - - - 1.000 - - - troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
51. si:dkey-4j21.1 17 1 - - - - - 1.000 - - - si:dkey-4j21.1, transcript variant X2
52. BX323876.2 ENSDARG00000104577 62 1 - - - - - 1.000 - - -
53. spef2 ENSDARG00000098330 59 1 - - - - - 1.000 - - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
54. ccdc127a 39 1 - - - - - 1.000 - - - coiled-coil domain containing 127a, transcript variant X2
55. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - 1.000 - - -
56. rab14l ENSDARG00000035188 18 1 - - - - - 1.000 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
57. si:ch211-132b12.7 ENSDARG00000068374 30 1 - - - - - 1.000 - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
58. si:dkey-14o6.8 ENSDARG00000103239 3 1 - - - - - 1.000 - - - si:dkey-14o6.8 [Source:ZFIN;Acc:ZDB-GENE-110913-90]
59. itgb1b ENSDARG00000104484 51 1 - - - - - 1.000 - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
60. otx5 ENSDARG00000043483 282 1 - - - - - 1.000 - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
61. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1 - - - - - 1.000 - - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
62. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - 1.000 - - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
63. si:dkey-88j15.4 ENSDARG00000079471 3 1 - - - - - 1.000 - - - si:dkey-88j15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-55]
64. si:dkey-285e18.3 si:dkey-285e18.3 10 1 - - - - - 1.000 - - -
65. axdnd1 ENSDARG00000062355 30 1 - - - - - 1.000 - - - axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
66. CU861664.1 CU861664.1 53 1 - - - - - 1.000 - - -
67. ENDOD1_2 ENDOD1_2 2 1 - - - - - 1.000 - - -
68. mcm3l ENSDARG00000037532, ENSDARG00000110461 7 1 - - - - - 1.000 - - - MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like [Source:ZFIN;Acc:ZDB-GENE-040121-2]
69. si:dkey-153k10.14 si:dkey-153k10.14 0 1 - - - - - 1.000 - - -
70. si:dkey-220o21.5 si:dkey-220o21.5 24 1 - - - - - 1.000 - - -
71. OMA1 ENSDARG00000090503 19 1 - - - - - 1.000 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
72. BX530066.1 BX530066.1 42 1 - - - - - 1.000 - - -
73. BX465203.1 ENSDARG00000113985 8 1 - - - - - 1.000 - - -
74. oca2 ENSDARG00000061303 22 1 - - - - - 1.000 - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
75. ggcta ENSDARG00000076406 33 1 - - - - - 1.000 - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
76. TTC29 ENSDARG00000058885, ENSDARG00000112776 1 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-100922-181]
77. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 1 - - - - - 1.000 - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]
78. si:dkey-25i10.5 si:dkey-25i10.5 18 1 - - - - - 1.000 - - -
79. zgc:123060_1 5 1 - - - - - 1.000 - - - zgc:123060
80. mir142a 20 1 - - - - - 1.000 - - - microRNA 142a
81. si:ch211-151h10.2 ENSDARG00000068250 14 1 - - - 1.000 - - - - - si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
82. si:dkey-114b16.4 si:dkey-114b16.4 35 1 - - - - - 1.000 - - -
83. tyro3 ENSDARG00000005356 4 1 - - - 1.000 - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
84. KBTBD3 ENSDARG00000060512 42 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
85. RP1 ENSDARG00000077687 6 1 - - - - - 1.000 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
86. si:ch211-114l13.12 ENSDARG00000088019 1 1 - - - - - 1.000 - - - si:ch211-114l13.12 [Source:ZFIN;Acc:ZDB-GENE-120215-211]
87. zgc:136254 ENSDARG00000068465 27 1 - - - - - 1.000 - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
88. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 - - - - - 1.000 - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
89. esr2b ENSDARG00000034181 20 1 - - - - - 1.000 - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
90. syne3 ENSDARG00000023237 23 1 - - - - - 1.000 - - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
91. col7a1l ENSDARG00000069692 44 1 - - - - - 1.000 - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
92. ABI3BP 2 1 - - - - - 1.000 - - - ABI family member 3 binding protein, transcript variant X3
93. si:ch211-59h6.1 ENSDARG00000013022 193 1 - - - - - 1.000 - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
94. wu:fb37b09 wu:fb37b09 10685 1 - - - - - 1.000 - - -
95. SNORD94 SNORD94 57 1 - - - - - - 1.000 - -
96. irak3 ENSDARG00000053131 16 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
97. si:dkey-8o9.6 si:dkey-8o9.6 0 1 - - - - - 1.000 - - -
98. SLC39A11 ENSDARG00000098194 23 1 - - - - - 1.000 - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
99. rilpl1 0 1 - - - - - 1.000 - - - Rab interacting lysosomal protein-like 1
100. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 1 - - - - - 1.000 - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]

There are 866 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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