Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col5a3b

Gene Name Gene ID Reads Annotation
col5a3b ENSDARG00000101816 56 collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]










Genes with expression patterns similar to col5a3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col5a3b ENSDARG00000101816 56 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
2. cacna2d2 cacna2d2 16 2.763 - - - 1.000 0.946 - 0.817 - -
3. cx39.4 ENSDARG00000070357 17 2 - - - 1.000 - 1.000 - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
4. tmem168b ENSDARG00000062168 17 2 - 1.000 - - - 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
5. PCBP3 ENSDARG00000054378 17 1.969 - - - 1.000 0.969 - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
6. rc3h2 ENSDARG00000063050 7 1.936 - - - - - 1.000 0.936 - - ring finger and CCCH-type domains 2 [Source:ZFIN;Acc:ZDB-GENE-060503-694]
7. palmda ENSDARG00000001913 26 1.908 - 0.908 - 1.000 - - - - - palmdelphin a [Source:ZFIN;Acc:ZDB-GENE-070705-48]
8. supt7l ENSDARG00000013461 41 1.848 - - - 0.848 - 1.000 - - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
9. nceh1a ENSDARG00000020427 35 1.837 - - - - 0.837 1.000 - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
10. ft2 ENSDARG00000109567 5 1.812 0.812 - - - - 1.000 - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
11. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1.773 0.812 - - 0.961 - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
12. ehf ENSDARG00000052115, ENSDARG00000112589 24 1.755 - - - - - 1.000 0.755 - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
13. si:dkey-2j6.2 si:dkey-2j6.2 5 1.751 - - - - - 1.000 - 0.751 -
14. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 1.744 0.744 - - - - 1.000 - - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
15. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1.737 - 0.799 - - 0.938 - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
16. MFAP4 ENSDARG00000090783 8 1.725 - 0.908 - - - - 0.817 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
17. cryba1l1 ENSDARG00000032929 1868 1.723 0.723 - - - - 1.000 - - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
18. SLC7A1 ENSDARG00000016439, ENSDARG00000115084 54 1.723 - - - 0.723 - - 1.000 - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
19. cox5b2 ENSDARG00000068738 182 1.721 0.776 - - - 0.945 - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
20. BX957278.1_1 ENSDARG00000010940 9 1.721 - - - - 0.970 - - 0.751 -
21. rasal3 ENSDARG00000089933 17 1.721 0.812 - - 0.909 - - - - - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
22. si:dkeyp-73d8.8 ENSDARG00000094045 17 1.714 0.812 - - - - - - 0.902 - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
23. fastkd3 ENSDARG00000100440 144 1.669 0.862 0.807 - - - - - - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
24. gdpd3b ENSDARG00000006944 19 1.65 - - - - 0.908 0.742 - - - glycerophosphodiester phosphodiesterase domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-121210-2]
25. FNDC3A ENSDARG00000105503 11 1.616 - 0.799 - - - - 0.817 - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
26. TEKT4 ENSDARG00000028899 47 1.6 0.711 - - - - 0.889 - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
27. si:rp71-17i16.6 ENSDARG00000095453 167 1.589 - - - - 0.834 0.755 - - - si:rp71-17i16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-410]
28. si:ch211-57m13.10 ENSDARG00000095902 1 1.568 - - - - - - 0.817 0.751 - si:ch211-57m13.10 [Source:ZFIN;Acc:ZDB-GENE-110411-264]
29. spata2l ENSDARG00000068814 152 1.559 - 0.815 - - 0.744 - - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
30. si:dkey-241l7.10 si:dkey-241l7.10 38 1.558 - - - - - 0.741 0.817 - -
31. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1.557 0.812 - - - - - 0.745 - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
32. CABZ01071446.1 CABZ01071446.1 4 1.54 0.723 - - - - - 0.817 - -
33. drd2b ENSDARG00000011091, ENSDARG00000111351 130 1.539 - 0.736 - - - - 0.803 - - dopamine receptor D2b [Source:ZFIN;Acc:ZDB-GENE-030910-2]
34. ptprja ENSDARG00000033042 25 1.525 - - - - - 0.708 0.817 - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
35. klhl38 klhl38 44 1.515 - 0.807 - - - - 0.708 - -
36. itpr1a ENSDARG00000014655, ENSDARG00000117119 151 1.502 0.719 - - - 0.783 - - - - inositol 1,4,5-trisphosphate receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070604-3]
37. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.479 - - - - 0.771 - 0.708 - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
38. pi15a ENSDARG00000045378 2361 1.472 - 0.729 - - - - 0.743 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
39. col5a3a_1 ENSDARG00000098294 271 1.468 - 0.735 - - - - 0.733 - - collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]
40. isg20l2 ENSDARG00000102266 167 1.436 0.712 - - - 0.724 - - - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
41. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - - - - 1.000 - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
42. si:ch211-126g16.8 3 1 - - - - - 1.000 - - - si:ch211-126g16.8, transcript variant X1
43. AL929092.2 AL929092.2 0 1 - - - - - 1.000 - - -
44. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1 - - - - - 1.000 - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
45. otx5 ENSDARG00000043483 282 1 - - - - - 1.000 - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
46. RBM11 ENSDARG00000090202 15 1 - - - - - 1.000 - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
47. si:dkey-117n7.2 ENSDARG00000093135 40 1 - - - - - 1.000 - - - si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
48. kcne4 ENSDARG00000068257 13 1 - - - - - 1.000 - - - potassium voltage-gated channel, Isk-related family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050419-163]
49. si:dkey-4j21.1 17 1 - - - - - 1.000 - - - si:dkey-4j21.1, transcript variant X2
50. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - - - - 1.000 - - -
51. apba2b ENSDARG00000060639 2 1 - - - - - 1.000 - - - amyloid beta (A4) precursor protein-binding, family A, member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5371]
52. ZBTB32 ENSDARG00000073726 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
53. CU302326.3 CU302326.3 6 1 - - - - - 1.000 - - -
54. MEX3D MEX3D 293 1 - - - - - 1.000 - - -
55. cdk20 ENSDARG00000003867 27 1 - - - - - 1.000 - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
56. BX537113.1_1 BX537113.1_1 3 1 - - - - - 1.000 - - -
57. cacna1f cacna1f 1 1 - - - - - 1.000 - - -
58. tnni1b ENSDARG00000052708 478 1 - - - - - 1.000 - - - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
59. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 1 - - - 1.000 - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
60. CABZ01044346.1 CABZ01044346.1 12 1 - - - 1.000 - - - - -
61. or111-2 ENSDARG00000025658 2 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
62. btf3l4 ENSDARG00000089681 2 1 - - - - - 1.000 - - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
63. zgc:136254 ENSDARG00000068465 27 1 - - - - - 1.000 - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
64. IMPG2_1 IMPG2_1 2 1 - - - - - 1.000 - - -
65. BX321870.1 ENSDARG00000098519 9 1 - - - - - 1.000 - - -
66. esr2b ENSDARG00000034181 20 1 - - - - - 1.000 - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
67. si:dkeyp-4f2.6 ENSDARG00000095596 3 1 - - - - - 1.000 - - - si:dkeyp-4f2.6 [Source:ZFIN;Acc:ZDB-GENE-110914-212]
68. SNORA14 SNORA14 10 1 - - - - - 1.000 - - -
69. lsm10 5 1 - - - 1.000 - - - - - LSM10, U7 small nuclear RNA associated
70. zgc:171500 ENSDARG00000071553 2 1 - - - - - 1.000 - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
71. fabp10b ENSDARG00000091101 44 1 - - - - - 1.000 - - - fatty acid binding protein 10b, liver basic [Source:ZFIN;Acc:ZDB-GENE-100217-2]
72. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - 1.000 - - -
73. si:dkeyp-13d11.2 79 1 - - - - - 1.000 - - - si:dkeyp-13d11.2
74. fgf10b ENSDARG00000100475 17 1 - - - - - 1.000 - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
75. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 - - - - - 1.000 - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
76. OMA1 ENSDARG00000090503 19 1 - - - - - 1.000 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
77. BX321875.5_1 BX321875.5_1 0 1 - - - - - 1.000 - - -
78. si:dkey-257e4.2 si:dkey-257e4.2 0 1 - - - - - 1.000 - - -
79. pmvk ENSDARG00000070798, ENSDARG00000109348 76 1 - - - - - 1.000 - - - phosphomevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-070410-91]
80. BX682558.1 ENSDARG00000101975 30 1 - - - - - 1.000 - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]
81. si:dkey-103j14.5 ENSDARG00000002219 0 1 - - - - - 1.000 - - - si:dkey-103j14.5 [Source:ZFIN;Acc:ZDB-GENE-090313-170]
82. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1 - - - - - 1.000 - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
83. ENDOD1_2 ENDOD1_2 2 1 - - - - - 1.000 - - -
84. PLEKHS1_1 PLEKHS1_1 23 1 - - - - - 1.000 - - -
85. wu:fb37b09 wu:fb37b09 10685 1 - - - - - 1.000 - - -
86. pwwp2b ENSDARG00000101080 138 1 - - - - - 1.000 - - - PWWP domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110930-2]
87. gata2b ENSDARG00000009094 16 1 - - - - - 1.000 - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
88. CABZ01053592.1 ENSDARG00000117388 6 1 - - - - - 1.000 - - -
89. CALN1 ENSDARG00000088898 114 1 - - - - - 1.000 - - - calneuron 1 [Source:ZFIN;Acc:ZDB-GENE-130313-1]
90. ABI3BP 2 1 - - - - - 1.000 - - - ABI family member 3 binding protein, transcript variant X3
91. BX323876.2 ENSDARG00000104577 62 1 - - - - - 1.000 - - -
92. si:ch73-74h11.1 ENSDARG00000062750 158 1 - - - - - 1.000 - - - si:ch73-74h11.1 [Source:ZFIN;Acc:ZDB-GENE-091204-215]
93. si:dkey-192l18.9 ENSDARG00000077878 10 1 - - - - - 1.000 - - - si:dkey-192l18.9 [Source:ZFIN;Acc:ZDB-GENE-120709-25]
94. BX465203.1 ENSDARG00000113985 8 1 - - - - - 1.000 - - -
95. sytl5 ENSDARG00000062135 11 1 - - - - - 1.000 - - - synaptotagmin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070912-424]
96. si:ch211-153l6.4 si:ch211-153l6.4 45 1 - - - - - 1.000 - - -
97. SPTBN4 ENSDARG00000092624 6 1 - - - - - 1.000 - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
98. zgc:165539 ENSDARG00000027639 20 1 - - - - - 1.000 - - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
99. syne3 ENSDARG00000023237 23 1 - - - - - 1.000 - - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
100. CT573468.1 CT573468.1 283 1 - - - - - 1.000 - - -

There are 866 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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