Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col5a1

Gene Name Gene ID Reads Annotation
col5a1 ENSDARG00000012593 24177 procollagen, type V, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-041105-6]










Genes with expression patterns similar to col5a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col5a1 ENSDARG00000012593 24177 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 procollagen, type V, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-041105-6]
2. irf2bp2a ENSDARG00000004702 6719 2.27 - - - - 0.770 - 0.707 - 0.793 interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
3. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.671 - - - - 0.830 - 0.841 - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
4. hadhb ENSDARG00000102055 9700 1.613 - - - - 0.811 - 0.802 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
5. col11a1b ENSDARG00000009014 9998 1.6 - - - - 0.747 - 0.853 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
6. rps19 ENSDARG00000030602 77975 1.6 - - - - - 0.752 0.848 - - ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
7. nr2f5 ENSDARG00000033172 11808 1.6 - 0.758 - - 0.842 - - - - nuclear receptor subfamily 2, group F, member 5 [Source:ZFIN;Acc:ZDB-GENE-990415-253]
8. minos1 ENSDARG00000101619 5273 1.591 - - - - 0.766 - 0.825 - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
9. cox7a3 20842 1.589 - - - - - 0.818 0.771 - - cytochrome c oxidase subunit VIIa polypeptide 3
10. C6H2orf40 C6H2orf40 4224 1.587 - - - - 0.782 - - - 0.805
11. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.583 - 0.727 - - - - 0.856 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
12. rpl7 ENSDARG00000007320 81359 1.583 - - - - - 0.707 0.876 - - ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
13. tceb1b 14935 1.576 - - - - 0.817 - 0.759 - - transcription elongation factor B (SIII), polypeptide 1b
14. srm ENSDARG00000055760 6572 1.576 - - - - 0.772 - - - 0.804 spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
15. mdh2 ENSDARG00000043371 14485 1.57 - - - - 0.774 - 0.796 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
16. cd9b ENSDARG00000016691 15573 1.567 - - - - - 0.818 - - 0.749 CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
17. hapln1a ENSDARG00000089769 12334 1.544 - - - - - - 0.704 - 0.840 hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
18. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 1.532 - - - - 0.748 - - - 0.784 BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
19. slc20a1b ENSDARG00000010641 2564 1.527 - - - - 0.735 - 0.792 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
20. wu:fb55g09 6015 1.526 - - - - 0.740 - 0.786 - - wu:fb55g09
21. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.525 - - - - - 0.728 0.797 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
22. flncb ENSDARG00000018820 5595 1.518 - - - - - - 0.710 - 0.808 filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
23. sdha ENSDARG00000016721 8255 1.514 - - - - - 0.708 0.806 - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
24. esd ENSDARG00000019496 3192 1.514 - - - - 0.736 - 0.778 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
25. col2a1a ENSDARG00000069093, ENSDARG00000111202 50276 1.513 - - - 0.803 - - - 0.710 - collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
26. psmb7 ENSDARG00000037962 11542 1.512 - 0.723 - - - - 0.789 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
27. col1a1b ENSDARG00000035809 88057 1.501 0.800 - 0.701 - - - - - - collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
28. s100v2 ENSDARG00000070702 8645 1.501 - - - - 0.769 0.732 - - - S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
29. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.5 - - - - 0.715 - - - 0.785 E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
30. tufm ENSDARG00000104173 9292 1.5 - - - - - 0.717 0.783 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
31. dldh ENSDARG00000008785 15202 1.492 - - - - - 0.787 0.705 - - dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
32. eif4e2 ENSDARG00000038585 2116 1.487 - 0.716 - - - - 0.771 - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
33. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.484 - 0.756 - - - - 0.728 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
34. pabpc1b ENSDARG00000021140 5729 1.483 - - - - - 0.743 0.740 - - poly A binding protein, cytoplasmic 1 b [Source:ZFIN;Acc:ZDB-GENE-050308-1]
35. ndufb3 ENSDARG00000075709 6609 1.482 - - 0.719 - - - 0.763 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
36. matn4 ENSDARG00000015947 10967 1.48 - - - - - 0.730 0.750 - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
37. mrps25 ENSDARG00000041306 3654 1.477 - 0.719 - - - - 0.758 - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
38. unc45b ENSDARG00000008433 8298 1.454 - 0.744 - - - - 0.710 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
39. si:dkey-251i10.2 ENSDARG00000093957 4424 1.452 - - - - 0.711 - - - 0.741 si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
40. larp1b ENSDARG00000061169 9939 1.451 - 0.733 - - - - 0.718 - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
41. lama4 ENSDARG00000020785 1522 1.449 - - - - 0.742 - 0.707 - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
42. dcn ENSDARG00000012066 6182 1.447 - - - - - - 0.746 0.701 - decorin [Source:ZFIN;Acc:ZDB-GENE-010102-1]
43. srl ENSDARG00000104587 11126 1.446 - - - 0.718 - - 0.728 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
44. ccng1 ENSDARG00000076667, ENSDARG00000110260 40792 1.445 0.738 - - - - - - - 0.707 cyclin G1 [Source:ZFIN;Acc:ZDB-GENE-020322-1]
45. mrpl11 ENSDARG00000013075 2927 1.443 - - - - 0.737 - 0.706 - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
46. rnf10 ENSDARG00000079687 6768 1.442 - 0.736 - - - - 0.706 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
47. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.435 - 0.722 - - 0.713 - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
48. eprs ENSDARG00000060494 4729 1.431 - 0.716 - - - - 0.715 - - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
49. tuba8l2 ENSDARG00000031164 19019 1.425 - - 0.713 0.712 - - - - - tubulin, alpha 8 like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1646]
50. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.424 - - - 0.709 - - 0.715 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
51. ryr1b ENSDARG00000023797 5693 1.421 0.714 - - - - - 0.707 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
52. rtn2a ENSDARG00000016088 12184 1.411 - - - 0.703 - - 0.708 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
53. rps18 ENSDARG00000100392 64615 0.924 - - - - - - 0.924 - - ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
54. cox6b2 ENSDARG00000037860 33134 0.909 - - - - - - 0.909 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
55. rps14 ENSDARG00000036629 125331 0.909 - - - - - - 0.909 - - ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
56. cox6a1 ENSDARG00000022438 18811 0.907 - - - - - - 0.907 - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
57. fkbp1aa ENSDARG00000022684 74052 0.905 - - - - - - 0.905 - - FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
58. faua ENSDARG00000099022 82901 0.904 - - - - - - 0.904 - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
59. rps27a ENSDARG00000032725, ENSDARG00000114059 132883 0.903 - - - - - - 0.903 - - ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
60. uba52 ENSDARG00000041435 50415 0.89 - - - - - - 0.890 - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
61. sdhb ENSDARG00000075768 5493 0.888 - - - - - - 0.888 - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
62. eef1db ENSDARG00000030053 5185 0.888 - - - - - - 0.888 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
63. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 0.883 - - - - - - 0.883 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
64. zgc:193541 ENSDARG00000092873 21276 0.882 - - - - - - 0.882 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
65. rps25 ENSDARG00000041811 52182 0.881 - - - - - - 0.881 - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
66. ndufs6 ENSDARG00000056583 7220 0.88 - - - - - - 0.880 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
67. rpl30 ENSDARG00000035871, ENSDARG00000109253 56661 0.876 - - - - - - 0.876 - - ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
68. eif3i ENSDARG00000017445 21149 0.874 - - - - - - 0.874 - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
69. cox7c ENSDARG00000104537 12169 0.872 - - - - - - 0.872 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
70. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 0.864 - - - - - - 0.864 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
71. rab1a rab1a 14138 0.863 - - - - 0.863 - - - -
72. nnt ENSDARG00000023536 7357 0.86 - - - - - - 0.860 - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
73. BDP1 BDP1 2514 0.858 - - - - - - 0.858 - -
74. rpl22 ENSDARG00000070437 56743 0.858 - - - - - - 0.858 - - ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
75. ndufb11 ENSDARG00000043467 7495 0.857 - - - - - - 0.857 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
76. atp5f1 16797 0.856 - - - - - - - - 0.856 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
77. ilk ENSDARG00000056964 6686 0.855 - - - - - - 0.855 - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
78. mt-nd5 ENSDARG00000063921 21268 0.855 - - - - - - 0.855 - - NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
79. si:ch1073-325m22.2 ENSDARG00000095921 8534 0.855 - - - - - - 0.855 - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
80. rps28 ENSDARG00000035860 34765 0.855 - - - - - - 0.855 - - ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]
81. hypk ENSDARG00000059725 20584 0.854 - - - - - - 0.854 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
82. atp5ib 19664 0.854 - - - - - - 0.854 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Eb
83. dbt ENSDARG00000101561, ENSDARG00000110773 1537 0.853 - - - - - - 0.853 - - dihydrolipoamide branched chain transacylase E2 [Source:ZFIN;Acc:ZDB-GENE-050320-85]
84. anp32b ENSDARG00000023330 25013 0.853 - 0.853 - - - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
85. fkbp7 ENSDARG00000010962 2986 0.85 - - - - - - 0.850 - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
86. acap3a ENSDARG00000075990 9652 0.849 - - - - - - 0.849 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
87. eif2s2 ENSDARG00000053047 15904 0.846 - - - - - - 0.846 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
88. phb ENSDARG00000057414 9551 0.845 - - - - - - 0.845 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
89. uqcrc2a ENSDARG00000014794 3949 0.844 - - - - - - 0.844 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
90. atf4b1 atf4b1 17316 0.844 - - - - - - 0.844 - -
91. atp5e 14858 0.843 - - - - - - 0.843 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
92. fh ENSDARG00000075132 1340 0.843 - - - - - - 0.843 - - fumarate hydratase [Source:ZFIN;Acc:ZDB-GENE-010724-6]
93. cyc1 ENSDARG00000038075 16699 0.839 - - - - - - 0.839 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
94. acadvl ENSDARG00000016687 5329 0.839 - - - - - - 0.839 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
95. col6a2 ENSDARG00000061436 5063 0.838 - - - - - - - - 0.838 collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
96. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 0.837 - - - - - - 0.837 - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
97. atpif1a 6030 0.836 - - - - - - 0.836 - - ATPase inhibitory factor 1a
98. coq9 ENSDARG00000023583, ENSDARG00000110255, ENSDARG00000111424 6051 0.835 - - - - - - 0.835 - - coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37]
99. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 0.835 - - - - - - 0.835 - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
100. hibadhb ENSDARG00000007959 4858 0.834 - - - - - - 0.834 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]

There are 717 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA