Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col4a6

Gene Name Gene ID Reads Annotation
col4a6 ENSDARG00000052061 8636 collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]










Genes with expression patterns similar to col4a6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col4a6 ENSDARG00000052061 8636 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
2. MATR3 MATR3 3962 2.494 - 0.789 - - 0.885 - 0.820 - -
3. reep3 reep3 2536 2.407 0.834 - - - - - 0.802 - 0.771
4. boc ENSDARG00000074335 4832 2.382 - - - - 0.935 - 0.725 0.722 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
5. tead3a ENSDARG00000074321 2240 2.362 0.830 - - - - - 0.748 - 0.784 TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
6. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 2.287 0.823 0.718 - - - - - - 0.746 kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
7. sec62 ENSDARG00000019951 3724 2.232 - - - - - - 0.738 0.718 0.776 SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
8. gpx4b ENSDARG00000076836 8085 2.192 0.736 - 0.702 - - - 0.754 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
9. ankrd13c ENSDARG00000103831 3593 1.846 0.901 - - - 0.945 - - - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
10. grpel1 ENSDARG00000010021 3055 1.792 - 0.882 - - - 0.910 - - - GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]
11. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.759 0.817 - - - 0.942 - - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
12. rtn3_1 ENSDARG00000091348 3290 1.738 - - - - 0.942 - 0.796 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
13. CWC15 ENSDARG00000013382 8969 1.729 - 0.811 - - 0.918 - - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
14. bag1 ENSDARG00000020895 1660 1.705 - 0.754 - - 0.951 - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
15. LEPROTL1 ENSDARG00000104871 3019 1.701 - - - - 0.950 - 0.751 - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
16. btg2 ENSDARG00000020298 6616 1.684 - 0.817 - - 0.867 - - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
17. snx12 ENSDARG00000019060 9563 1.683 - - - - 0.930 - 0.753 - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
18. ubtf ENSDARG00000035066 4070 1.671 - - - - 0.936 - 0.735 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
19. tefa ENSDARG00000039117, ENSDARG00000109532 3065 1.67 - - - - 0.952 - 0.718 - - thyrotrophic embryonic factor a [Source:ZFIN;Acc:ZDB-GENE-990415-264]
20. smc1al ENSDARG00000058203 8838 1.668 - - - - 0.895 - 0.773 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
21. zgc:55512 zgc:55512 4436 1.663 - - - - 0.952 - 0.711 - -
22. CPEB2 ENSDARG00000052604 2646 1.654 - - - - 0.948 - 0.706 - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
23. hif1ab ENSDARG00000034293 10284 1.649 - - - - 0.912 - - - 0.737 hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
24. itgb1bp1 ENSDARG00000007169 2723 1.644 - - - - 0.943 - 0.701 - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
25. ctnnbip1 ENSDARG00000038954 2519 1.644 - - - - 0.939 - 0.705 - - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
26. huwe1 ENSDARG00000016782 6493 1.631 - 0.828 - - - - 0.803 - - HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]
27. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.624 0.831 - - - - - - - 0.793 connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
28. kpna4 ENSDARG00000023190 2505 1.615 - 0.849 - - - - 0.766 - - karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
29. snai2 ENSDARG00000040046 2415 1.611 0.834 - - - - - - - 0.777 snail family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030326-6]
30. rcor1 ENSDARG00000031434 2733 1.61 0.790 0.820 - - - - - - - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
31. stau2 ENSDARG00000026801, ENSDARG00000112268 5161 1.61 - 0.819 - - - - 0.791 - - staufen double-stranded RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-687]
32. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.607 - 0.819 - - - - 0.788 - - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
33. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.596 0.787 - - - 0.809 - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
34. col6a1 ENSDARG00000074908 2339 1.595 0.842 - - - - - - - 0.753 collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
35. mark3 mark3 1375 1.586 0.837 - - - - - - - 0.749
36. pbx4 ENSDARG00000052150 35676 1.585 - 0.796 - - - - 0.789 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
37. top1l ENSDARG00000070545 40529 1.583 0.774 - - - - - 0.809 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
38. aacs ENSDARG00000012468 1138 1.579 0.848 - - - - - - - 0.731 acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
39. prkar1aa ENSDARG00000076128 6565 1.569 0.786 - - - - - 0.783 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
40. myeov2 3351 1.565 0.824 - - - - - 0.741 - - myeloma overexpressed 2
41. atp2b4 5891 1.564 0.741 - - - - - 0.823 - - ATPase, Ca++ transporting, plasma membrane 4
42. slc39a7 ENSDARG00000104451 6368 1.558 - 0.792 - - - - 0.766 - - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
43. sdr16c5a ENSDARG00000016233 2413 1.557 0.801 - - - - - - - 0.756 short chain dehydrogenase/reductase family 16C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2049]
44. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.554 - 0.787 - - - - 0.767 - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
45. AP3B1 2363 1.552 0.798 0.754 - - - - - - - adaptor related protein complex 3 beta 1 subunit
46. stmn1a ENSDARG00000004169 21169 1.549 - - - - 0.762 - 0.787 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
47. itga6b ENSDARG00000069946, ENSDARG00000110478 1126 1.548 0.846 - - - - - 0.702 - - integrin, alpha 6b [Source:ZFIN;Acc:ZDB-GENE-050320-5]
48. efna1a ENSDARG00000030326 1692 1.545 0.827 - - - - - 0.718 - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
49. zfhx4 ENSDARG00000075542 6927 1.54 - - - - 0.757 - 0.783 - - zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
50. hnrpl 6412 1.538 0.777 - - - - - 0.761 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
51. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.537 0.809 - - - - - 0.728 - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
52. tmem167a ENSDARG00000035914 3319 1.535 - 0.718 - - - - 0.817 - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
53. ube2e1 ENSDARG00000116649 10656 1.53 0.763 - - - 0.767 - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
54. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.53 0.794 - - - - - - - 0.736 glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
55. syncrip ENSDARG00000040184 24690 1.528 0.817 - - - - 0.711 - - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
56. egfra ENSDARG00000013847 2912 1.527 0.825 - - - - - 0.702 - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
57. serinc1 ENSDARG00000009106 10571 1.515 - - - - - 0.751 0.764 - - serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
58. CU571336.2 CU571336.2 2690 1.512 - 0.797 - - - - 0.715 - -
59. txnrd1 11401 1.508 0.787 - - - - - 0.721 - - thioredoxin reductase 1
60. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.507 0.731 - - - - - 0.776 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
61. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.506 - - - - - - 0.797 - 0.709 DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
62. axin2 ENSDARG00000100149 4223 1.504 - - - - - - 0.744 - 0.760 axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
63. myef2 ENSDARG00000059398 6050 1.5 - 0.709 - - - - 0.791 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
64. pygmb ENSDARG00000013317 5454 1.496 0.789 0.707 - - - - - - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
65. sgut1 3470 1.493 - - - - - - 0.738 - 0.755 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, transcript variant X1
66. cyb5a ENSDARG00000098589 9430 1.493 - 0.731 - - - - 0.762 - - cytochrome b5 type A (microsomal) [Source:ZFIN;Acc:ZDB-GENE-040426-2148]
67. shfm1 7620 1.488 - 0.786 - - - - 0.702 - - split hand/foot malformation (ectrodactyly) type 1
68. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.487 0.729 - - - - - 0.758 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
69. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.486 0.777 0.709 - - - - - - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
70. AIFM2 ENSDARG00000077549 1419 1.483 - 0.772 - - - - - - 0.711 apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
71. GCA GCA 5211 1.479 0.760 - - - - - - - 0.719
72. anp32e ENSDARG00000054804 11017 1.479 - 0.744 - - - - 0.735 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
73. emilin1b ENSDARG00000026166 1530 1.479 - 0.738 - - - - - - 0.741 elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
74. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.475 0.752 - - - - - 0.723 - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
75. f11r f11r 16668 1.473 0.712 - - - 0.761 - - - -
76. c1d ENSDARG00000021112 2839 1.466 - 0.741 - - - - 0.725 - - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
77. map3k7 ENSDARG00000020469 2845 1.457 - - - - - - 0.717 - 0.740 mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
78. prpf4bb ENSDARG00000040310 2260 1.451 - 0.710 - - - - 0.741 - - pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
79. hexim1 ENSDARG00000036482 4317 1.45 - 0.734 - - - - 0.716 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
80. rhebl1 ENSDARG00000039162 3966 1.445 - - - - - - 0.701 - 0.744 Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
81. grpel2 ENSDARG00000069421 5673 1.441 - - - - - 0.713 - - 0.728 GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
82. anapc16 ENSDARG00000013822 5857 1.438 - - - - - - 0.728 - 0.710 anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
83. srsf11 ENSDARG00000098574 12801 1.437 0.719 - - - - - 0.718 - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
84. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.433 - 0.709 - - - - 0.724 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
85. wwtr1 ENSDARG00000067719 3484 1.426 - - - - - - 0.713 0.713 - WW domain containing transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-051101-1]
86. ubald1b ENSDARG00000020976 1162 1.424 - 0.702 - - - - 0.722 - - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
87. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 1.418 - 0.701 - - - - 0.717 - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
88. nucks1a ENSDARG00000078473 28285 1.414 0.713 0.701 - - - - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
89. si:ch211-214j24.10 ENSDARG00000045847 5145 1.406 0.702 0.704 - - - - - - - si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
90. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 0.981 0.981 - - - - - - - - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
91. tspan7b ENSDARG00000008407 5740 0.955 - - - - 0.955 - - - - tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
92. sf3a2 ENSDARG00000021107 2929 0.952 - - - - 0.952 - - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
93. bckdk ENSDARG00000016904 3775 0.951 - - - - 0.951 - - - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
94. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 0.951 - - - - 0.951 - - - - VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
95. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 0.951 - - - - 0.951 - - - - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
96. DNAJA4 ENSDARG00000051762 5657 0.95 - - - - 0.950 - - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
97. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 0.948 - - - - 0.948 - - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
98. unc119.1 ENSDARG00000009629 1193 0.948 - - - - 0.948 - - - - unc-119 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030219-130]
99. nrbp1 ENSDARG00000056089, ENSDARG00000114035 1738 0.948 - - - - 0.948 - - - - nuclear receptor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-146]
100. rqcd1 2301 0.948 - - - - 0.948 - - - - RCD1 required for cell differentiation1 homolog (S. pombe)

There are 976 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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