Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col4a3

Gene Name Gene ID Reads Annotation
col4a3 ENSDARG00000003395 499 collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]










Genes with expression patterns similar to col4a3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col4a3 ENSDARG00000003395 499 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]
2. traf2b ENSDARG00000101036 429 1.945 - - - - - 0.962 - - 0.983 Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
3. lxn ENSDARG00000043102 415 1.935 - - - - - 0.956 - - 0.979 latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
4. dnajb9a ENSDARG00000052072 578 1.933 - - - - - 0.965 - - 0.968 DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
5. grp ENSDARG00000043074 747 1.922 - - - - - 0.966 - - 0.956 gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
6. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 1.893 - - - - - 0.918 - - 0.975 glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
7. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 1.847 - - - - - 0.880 - - 0.967 NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
8. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.845 - - - - - 0.939 - - 0.906 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
9. kbp kbp 701 1.836 - - - - - 0.875 - - 0.961
10. sh3rf1 ENSDARG00000070470 1463 1.835 - - - - - 0.899 - - 0.936 SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
11. cdc20 ENSDARG00000100741 3264 1.805 - - - - - 0.941 - - 0.864 cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
12. adipor1b ENSDARG00000042717 1348 1.788 - - - - - 0.833 - - 0.955 adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
13. myeov2 3351 1.772 - - - - - 0.855 - - 0.917 myeloma overexpressed 2
14. rfx2 ENSDARG00000013575 1275 1.766 - - - - - 0.821 - - 0.945 regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
15. GRB7 ENSDARG00000042726 100 1.744 - - - - - 0.955 - 0.789 - growth factor receptor bound protein 7 [Source:ZFIN;Acc:ZDB-GENE-091118-23]
16. tgm1l4 ENSDARG00000101407 800 1.737 - 0.792 - - - 0.945 - - - transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
17. zgc:110286 92 1.736 - - - - - 0.969 0.767 - - zgc:110286
18. strbp ENSDARG00000021455 1279 1.734 - - - - - 0.776 - - 0.958 spermatid perinuclear RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030729-18]
19. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.711 - - - - - 0.821 - - 0.890 transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
20. C2CD2 ENSDARG00000105000 2573 1.707 - 0.738 - - - 0.969 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
21. acot9.2 ENSDARG00000058390, ENSDARG00000113544 438 1.707 - - - - - - 0.734 - 0.973 acyl-CoA thioesterase 9, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-051113-136]
22. CU929394.1 CU929394.1 405 1.699 - - - - - - - 0.747 0.952
23. cbfa2t2 ENSDARG00000074337 4323 1.692 - - - - - 0.818 - - 0.874 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
24. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.691 - 0.799 - - - - - - 0.892 solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
25. znf592 ENSDARG00000060885 776 1.684 0.746 - - - - - - - 0.938 zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
26. TRAPPC10 ENSDARG00000098118 954 1.683 - - - - - - - 0.712 0.971 trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
27. csnk1g2a ENSDARG00000005458 2917 1.682 - 0.831 - - - 0.851 - - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
28. BX511121.1 ENSDARG00000029997 1774 1.681 - - - - 0.712 - - - 0.969
29. olfml2a ENSDARG00000005648 1157 1.679 - 0.705 - - - - - - 0.974 olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
30. sly1 sly1 2403 1.678 - - - - - 0.745 - - 0.933
31. gtf2e1 ENSDARG00000000542, ENSDARG00000115244 899 1.672 - 0.775 - - - 0.897 - - - general transcription factor IIE, polypeptide 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041210-221]
32. vkorc1 ENSDARG00000086183 1212 1.665 - - - - 0.710 - - - 0.955 vitamin K epoxide reductase complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2286]
33. GPR31 431 1.649 - 0.760 - - - 0.889 - - - G protein-coupled receptor 31
34. capn8 ENSDARG00000055715, ENSDARG00000111228 497 1.646 - 0.730 - - - 0.916 - - - calpain 8 [Source:ZFIN;Acc:ZDB-GENE-050522-279]
35. pmepa1 ENSDARG00000039325 652 1.633 - 0.735 - - - - - - 0.898 prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
36. si:dkey-13i19.8 ENSDARG00000093058 4617 1.631 - - - - - 0.724 - - 0.907 si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
37. urah urah 4152 1.628 - 0.817 - - - - - - 0.811
38. ARSJ ENSDARG00000077590 684 1.611 - - - - - 0.910 - 0.701 - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
39. dusp7 ENSDARG00000101413 1307 1.58 0.819 - - - - 0.761 - - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
40. aplp2 ENSDARG00000054864 7958 1.576 - - - - 0.787 - - - 0.789 amyloid beta (A4) precursor-like protein 2 [Source:ZFIN;Acc:ZDB-GENE-061009-28]
41. eif5 ENSDARG00000003681 7986 1.505 - - - - - 0.707 - - 0.798 eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
42. PAMR1 ENSDARG00000093480 40 1.503 - - - - - - 0.738 0.765 - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
43. CABZ01055343.2 CABZ01055343.2 10312 1.479 - 0.713 - - - 0.766 - - -
44. NACC2 160 0.989 - - - - - - - - 0.989 NACC family member 2
45. zgc:163030 ENSDARG00000069192 2963 0.988 - - - - - 0.988 - - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
46. wrap73 ENSDARG00000009557 515 0.985 - - - - - - - - 0.985 WD repeat containing, antisense to TP73 [Source:ZFIN;Acc:ZDB-GENE-030131-6313]
47. PPFIBP1_2 PPFIBP1_2 1274 0.984 - - - - - - - - 0.984
48. C13H4orf32 C13H4orf32 174 0.982 - - - - - 0.982 - - -
49. si:ch211-198c19.2 si:ch211-198c19.2 165 0.982 - - - - - - - - 0.982
50. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.981 - - - - - - - - 0.981 vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
51. serac1 ENSDARG00000056121, ENSDARG00000116580 196 0.981 - - - - - 0.981 - - - serine active site containing 1 [Source:ZFIN;Acc:ZDB-GENE-040616-1]
52. gins1 ENSDARG00000007624 1421 0.979 - - - - - - - - 0.979 GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
53. cdipt ENSDARG00000070686 1318 0.979 - - - - - - - - 0.979 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
54. zgc:91909 ENSDARG00000021287 1488 0.978 - - - - - 0.978 - - - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
55. rsph4a ENSDARG00000067606 132 0.978 - - - - - - - - 0.978 radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
56. C16H8orf76 C16H8orf76 329 0.978 - - - - - - - - 0.978
57. ngly1 ENSDARG00000003205 733 0.978 - - - - - 0.978 - - - N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
58. alg9 ENSDARG00000012840 631 0.978 - - - - - - - - 0.978 ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
59. dhrs13a.2 ENSDARG00000111240 491 0.978 - - - - - 0.978 - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
60. igsf5 igsf5 85 0.978 - - - - - - - - 0.978
61. ypel5 ENSDARG00000088929 1011 0.978 - - - - - - - - 0.978 yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
62. zgc:153311 ENSDARG00000015964 85 0.977 - - - - - - - - 0.977 zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
63. BX571949.1 BX571949.1 293 0.977 - - - - - - - - 0.977
64. zgc:195633_1 142 0.977 - - - - - - - - 0.977 zgc:195633
65. fas ENSDARG00000043586 194 0.977 - - - - - - - - 0.977 Fas cell surface death receptor [Source:ZFIN;Acc:ZDB-GENE-061019-2]
66. MRPS12_1 MRPS12_1 2714 0.977 - - - - - - - - 0.977
67. RIBC2 ENSDARG00000075177 445 0.977 - - - - - - - - 0.977 RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
68. ARHGEF15 ENSDARG00000100293 553 0.977 - - - - - - - - 0.977 Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
69. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 0.976 - - - - - - - - 0.976 putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
70. si:ch211-271e10.2 ENSDARG00000092667 177 0.976 - - - - - 0.976 - - - si:ch211-271e10.2 [Source:ZFIN;Acc:ZDB-GENE-060526-146]
71. mtfr1 ENSDARG00000045304 277 0.976 - - - - - - - - 0.976 mitochondrial fission regulator 1 [Source:ZFIN;Acc:ZDB-GENE-041212-86]
72. si:dkey-27i16.3 si:dkey-27i16.3 494 0.976 - - - - - 0.976 - - -
73. adamts6 ENSDARG00000041982 320 0.976 - - - - - - - - 0.976 ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:ZFIN;Acc:ZDB-GENE-091113-9]
74. BCL2L12 BCL2L12 327 0.975 - - - - - - - - 0.975
75. bida ENSDARG00000069290, ENSDARG00000112031 825 0.975 - - - - - - - - 0.975 BH3 interacting domain death agonist [Source:ZFIN;Acc:ZDB-GENE-050419-35]
76. afap1l2 ENSDARG00000074806 367 0.975 - - - - - - - - 0.975 actin filament associated protein 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-100318-1]
77. EMILIN2 EMILIN2 429 0.975 - - - - - - - - 0.975
78. TESK1_1 TESK1_1 276 0.974 - - - - - 0.974 - - -
79. s1pr5a ENSDARG00000040526 923 0.973 - - - - - - - - 0.973 sphingosine-1-phosphate receptor 5a [Source:ZFIN;Acc:ZDB-GENE-041114-188]
80. TRABD2A ENSDARG00000089701 401 0.973 - - - - - - - - 0.973 TraB domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-4053]
81. znf750 ENSDARG00000102267 327 0.973 - - - - - 0.973 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
82. ing5b ENSDARG00000068175 2502 0.973 - - - - - - - - 0.973 inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
83. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.973 - - - - - - - - 0.973 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
84. slc25a32b ENSDARG00000026835 502 0.973 - - - - - - - - 0.973 solute carrier family 25 (mitochondrial folate carrier), member 32b [Source:ZFIN;Acc:ZDB-GENE-050306-39]
85. wnt10a ENSDARG00000017155 491 0.973 - - - - - - - - 0.973 wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
86. MYOF ENSDARG00000006112 436 0.973 - - - - - 0.973 - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
87. adam15 ENSDARG00000089213 359 0.972 - - - - - 0.972 - - - ADAM metallopeptidase domain 15 [Source:ZFIN;Acc:ZDB-GENE-070809-4]
88. si:dkey-169i5.4 ENSDARG00000077862 511 0.972 - - - - - 0.972 - - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
89. zgc:174160 484 0.972 - - - - - - - - 0.972 zgc:174160, transcript variant X1
90. cetn4 ENSDARG00000041215 898 0.972 - - - - - - - - 0.972 centrin 4 [Source:ZFIN;Acc:ZDB-GENE-030826-21]
91. nucb1 ENSDARG00000054833 2009 0.972 - - - - - - - - 0.972 nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
92. CTTNBP2NL CTTNBP2NL 260 0.972 - - - - - - - - 0.972
93. wdfy2 ENSDARG00000040453 406 0.972 - - - - - - - - 0.972 WD repeat and FYVE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041111-211]
94. ecsit ENSDARG00000062834 896 0.972 - - - - - - - - 0.972 ECSIT signalling integrator [Source:ZFIN;Acc:ZDB-GENE-030131-1332]
95. txnl1 ENSDARG00000011921 692 0.972 - - - - - 0.972 - - - thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]
96. dbnla ENSDARG00000008170 2129 0.971 - - - - - 0.971 - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
97. RAP1GAP2_1 RAP1GAP2_1 80 0.971 - - - - - - 0.971 - -
98. C11H19orf25 C11H19orf25 491 0.971 - - - - - - - - 0.971
99. FP017169.3 FP017169.3 216 0.971 - - - - - 0.971 - - -
100. BRPF3 BRPF3 458 0.971 - - - - - - - - 0.971

There are 1320 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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