Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col4a2

Gene Name Gene ID Reads Annotation
col4a2 ENSDARG00000104110 947 collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]










Genes with expression patterns similar to col4a2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col4a2 ENSDARG00000104110 947 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]
2. cd248b ENSDARG00000077938 2561 2.437 - 0.756 - - - 0.818 0.863 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
3. MYOM3 2720 2.351 - 0.726 - - - 0.881 0.744 - - myomesin 3, transcript variant X2
4. CU633479.5 ENSDARG00000114818 1815 2.322 - 0.703 - - - 0.775 0.844 - -
5. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 2.307 - 0.733 - - - 0.746 0.828 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
6. chrna1 ENSDARG00000009021 2931 2.293 - - - - - 0.847 0.744 - 0.702 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
7. smtnl1 ENSDARG00000041257 7410 2.282 - - - - - 0.735 0.809 - 0.738 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
8. TRIM63 TRIM63 1600 2.276 - 0.707 - - - 0.813 0.756 - -
9. C25H12orf73 C25H12orf73 2031 2.261 - 0.727 - - - 0.788 0.746 - -
10. hsd17b10 ENSDARG00000017781 1793 2.26 - 0.771 - - - 0.767 0.722 - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
11. lpl ENSDARG00000087697 2578 2.26 - 0.747 - - - 0.811 0.702 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
12. mrpl38 ENSDARG00000039667 1145 2.255 - 0.785 - - - 0.728 0.742 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
13. ATP5J_2 ATP5J_2 2381 2.247 - 0.737 - - - 0.717 0.793 - -
14. six1b ENSDARG00000026473 1908 2.238 - 0.727 - - - 0.719 0.792 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
15. cacng1 cacng1 3118 2.218 - 0.744 - - - 0.710 0.764 - -
16. kbtbd12 ENSDARG00000001882 1196 2.194 - 0.711 - - - 0.754 0.729 - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
17. MYOT ENSDARG00000076312 1791 2.191 - 0.705 - - - 0.730 0.756 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
18. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 2.188 - 0.755 - - - 0.729 0.704 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
19. klhl40a ENSDARG00000039052 2537 2.186 - 0.721 - - - 0.711 0.754 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
20. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 2.185 - 0.727 - - - - 0.723 - 0.735 EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
21. nid1a ENSDARG00000068710 3948 1.737 - - - - - 0.842 0.895 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
22. gypc ENSDARG00000041546 1487 1.71 - - - - - 0.872 0.838 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
23. acsl1 acsl1 4216 1.696 - - - - - 0.886 0.810 - -
24. slc16a3 ENSDARG00000045051 818 1.692 - - - - - 0.825 0.867 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
25. cilp ENSDARG00000053362 1429 1.682 - 0.828 - - - - 0.854 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
26. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.655 - - - - - 0.841 0.814 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
27. fitm1 ENSDARG00000056464 1759 1.649 - 0.777 - - - - 0.872 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
28. ntmt1 ENSDARG00000022399 5779 1.647 - - - - - 0.779 0.868 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
29. cycsb ENSDARG00000044562 40227 1.642 - - - - - 0.880 0.762 - - cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
30. alpk2 ENSDARG00000079637 1483 1.636 - 0.811 - - - - 0.825 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
31. ndufs6 ENSDARG00000056583 7220 1.623 - - - - - 0.803 0.820 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
32. zgc:158296 ENSDARG00000070923 3935 1.623 - - - - - 0.787 0.836 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
33. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.616 - 0.712 - - - - 0.904 - -
34. fbp2 ENSDARG00000012366 1042 1.615 - - - - - 0.792 0.823 - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
35. pdss1 ENSDARG00000017910 1290 1.609 - - - - - 0.754 0.855 - - prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4430]
36. cct8 ENSDARG00000008243 6843 1.606 - 0.827 - - - - 0.779 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
37. zgc:92518 ENSDARG00000016343 3837 1.602 - - - - - 0.790 0.812 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
38. txn2 ENSDARG00000034777 4071 1.6 - 0.749 - - - - 0.851 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
39. serpinf1 ENSDARG00000069048 2083 1.598 - 0.782 - - - - 0.816 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
40. zgc:92113 1738 1.595 - - - - - 0.818 0.777 - - zgc:92113
41. cox7c ENSDARG00000104537 12169 1.594 - - - - - 0.771 0.823 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
42. tmem182 tmem182 12589 1.593 - - - - - 0.763 0.830 - -
43. xirp2a ENSDARG00000071113 7113 1.592 - - - - - 0.748 0.844 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
44. col11a1b ENSDARG00000009014 9998 1.591 - - - - - 0.720 0.871 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
45. immt ENSDARG00000102874 3435 1.59 - - - - - 0.826 0.764 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
46. cap2 ENSDARG00000104478 3266 1.586 - 0.782 - - - - 0.804 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
47. dyrk2 ENSDARG00000094646 2163 1.584 - 0.836 - - - - 0.748 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
48. kcnma1a ENSDARG00000079840 2584 1.584 - - - - - 0.714 0.870 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
49. myod1 ENSDARG00000030110 6019 1.582 - - - - - 0.745 0.837 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
50. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 1.581 - 0.767 - - - - 0.814 - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
51. txlnbb ENSDARG00000076241 6396 1.578 - - - - - 0.763 0.815 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
52. PTGES3L PTGES3L 4801 1.578 - - - - - 0.746 0.832 - -
53. pdcd4a ENSDARG00000021702 7293 1.577 - - - - - 0.743 0.834 - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
54. flncb ENSDARG00000018820 5595 1.575 - - - - - 0.793 0.782 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
55. myoz2b ENSDARG00000037266 2139 1.574 - - - - - 0.791 0.783 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
56. mrpl27 ENSDARG00000032985 2158 1.573 - 0.772 - - - 0.801 - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
57. sh3bgr ENSDARG00000021633 3498 1.573 - - - - - 0.762 0.811 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
58. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.573 - - - - - 0.757 0.816 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
59. tnnc1b ENSDARG00000037539 13945 1.572 - - - - - 0.781 0.791 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
60. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.569 - - - - - 0.788 0.781 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
61. ms4a17a.14 829 1.568 - - - - - 0.783 0.785 - - membrane-spanning 4-domains, subfamily A, member 17A.14
62. myom1a ENSDARG00000061249 10230 1.568 - - - - - 0.763 0.805 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
63. farsb ENSDARG00000016864 6776 1.566 - - - - - 0.803 0.763 - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
64. mrps18a ENSDARG00000024465 5187 1.563 - - - - - 0.812 0.751 - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
65. znf648 ENSDARG00000104823 1918 1.563 - - - - - 0.704 0.859 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
66. mrps18b ENSDARG00000007065 2121 1.561 - 0.823 - - - - 0.738 - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
67. alpk3a ENSDARG00000078989 1992 1.561 - 0.739 - - - - 0.822 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
68. ahsa1 ahsa1 2012 1.559 - - - - - 0.773 0.786 - -
69. agla ENSDARG00000103811 2856 1.558 - - - - - 0.752 0.806 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
70. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 1.558 - - - - - 0.729 0.829 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
71. lrrc8c ENSDARG00000099911 1499 1.558 - 0.713 - - - - 0.845 - - leucine rich repeat containing 8 VRAC subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2965]
72. ppapdc3 ppapdc3 4924 1.554 - - - - - 0.748 0.806 - -
73. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.554 - - - - - 0.755 0.799 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
74. cyc1 ENSDARG00000038075 16699 1.554 - - - - - 0.814 0.740 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
75. jph1a ENSDARG00000058603 2852 1.553 - - - - - 0.725 0.828 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
76. hadhab ENSDARG00000060594 3664 1.552 - - - - - 0.705 0.847 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
77. nexn ENSDARG00000057317 10972 1.55 - - - - - 0.775 0.775 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
78. PTPLA PTPLA 4044 1.55 - - - - - 0.791 0.759 - -
79. trim101 ENSDARG00000018264 827 1.546 - - - - - 0.729 0.817 - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
80. hspb7 ENSDARG00000104441 1417 1.545 - 0.801 - - - - 0.744 - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
81. BX294434.1 ENSDARG00000061272 6493 1.544 - 0.736 - - - - 0.808 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
82. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.544 - - - - - 0.730 0.814 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
83. sptb ENSDARG00000030490 7128 1.544 - 0.737 - - - - 0.807 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
84. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.539 - - - - - 0.771 0.768 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
85. aldh7a1 ENSDARG00000018426 4637 1.539 0.755 - - - - 0.784 - - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
86. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 1.535 - - - - - 0.784 0.751 - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
87. ITGB1BP2 ENSDARG00000030176 2472 1.534 - 0.706 - - - - 0.828 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
88. fbxo8 ENSDARG00000007477 603 1.533 - - - - - 0.725 0.808 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
89. eif2s1b ENSDARG00000052178 11961 1.531 - - - - - 0.746 0.785 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
90. C22H19orf70 C22H19orf70 4393 1.529 - - - - - 0.740 0.789 - -
91. klhl21 ENSDARG00000039255 2550 1.528 - 0.741 - - - - 0.787 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
92. prx ENSDARG00000017246 6183 1.526 - - - - - - 0.824 - 0.702 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
93. ndufb11 ENSDARG00000043467 7495 1.525 - - - - - 0.703 0.822 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
94. hibadhb ENSDARG00000007959 4858 1.524 - - - - - 0.775 0.749 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
95. timm9 ENSDARG00000043865 2456 1.523 - - - - - 0.791 0.732 - - translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
96. ndufb3 ENSDARG00000075709 6609 1.522 - - - - - 0.776 0.746 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:ZFIN;Acc:ZDB-GENE-091204-407]
97. mdh1b ENSDARG00000018008 3196 1.521 - - - - - 0.706 0.815 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
98. atp5j 4272 1.519 - - - - - 0.726 0.793 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
99. zgc:193541 ENSDARG00000092873 21276 1.517 - - - - - 0.748 0.769 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
100. mrps35 ENSDARG00000038456 1514 1.517 - - - - - 0.786 0.731 - - mitochondrial ribosomal protein S35 [Source:ZFIN;Acc:ZDB-GENE-050809-131]

There are 905 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA