Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col4a1

Gene Name Gene ID Reads Annotation
col4a1 ENSDARG00000055009 3083 collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]










Genes with expression patterns similar to col4a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col4a1 ENSDARG00000055009 3083 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
2. cd248b ENSDARG00000077938 2561 2.413 0.728 - - - - 0.806 0.879 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
3. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.966 - 0.996 - - - - - - 0.970 zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
4. cnn3b ENSDARG00000029856 4807 1.954 - 0.993 - - - - - - 0.961 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
5. NDUFA3 ENSDARG00000041400 7939 1.945 - 0.980 - - - - - - 0.965 NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
6. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 1.939 - 0.982 - - - - - - 0.957 platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
7. grb2b ENSDARG00000038059 9050 1.84 - 0.967 - - - - - - 0.873 growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
8. mrp63 mrp63 2500 1.811 - 0.995 - - - - 0.816 - -
9. ndufb11 ENSDARG00000043467 7495 1.792 - 0.986 - - - - 0.806 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
10. si:ch211-207e19.11 si:ch211-207e19.11 9604 1.788 - 0.910 - - - - 0.878 - -
11. abcb7 ENSDARG00000062795 1404 1.773 - 0.991 - - - 0.782 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
12. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 1.771 - 0.996 - - - - 0.775 - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
13. hcfc1b ENSDARG00000012519 3633 1.761 - - - - - 0.780 - - 0.981 host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
14. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 1.76 - 0.997 - - - - 0.763 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
15. cnot11 ENSDARG00000068596 829 1.754 - 0.993 - - - 0.761 - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
16. AKAP2 AKAP2 4178 1.742 - 0.993 - - - - 0.749 - -
17. CYHR1 ENSDARG00000061057 2625 1.74 - - - - - 0.745 - - 0.995 cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
18. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.738 - 0.993 - - - - 0.745 - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
19. glrx5 ENSDARG00000043665 2687 1.721 - 0.989 - - - - 0.732 - - glutaredoxin 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1957]
20. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 1.717 - - - - - 0.723 - - 0.994 splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
21. gmps ENSDARG00000079848 8217 1.708 - - - - - 0.718 - - 0.990 guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
22. zgc:158409 zgc:158409 21963 1.706 - - - - - 0.747 - - 0.959
23. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 1.703 - 0.994 - - - - 0.709 - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
24. ap2b1 ENSDARG00000035152 2912 1.702 - 0.992 - - - 0.710 - - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
25. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.697 - 0.947 - - - - 0.750 - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
26. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.697 - 0.981 - - - - 0.716 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
27. sox2 ENSDARG00000070913 2763 1.695 - - - - - 0.720 - - 0.975 SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
28. arrdc3b ENSDARG00000036028 3157 1.694 - 0.939 - - - 0.755 - - - arrestin domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-040912-182]
29. mrps9 ENSDARG00000061505 1636 1.682 - - - - - 0.839 0.843 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
30. timm10 ENSDARG00000069116 4459 1.678 - 0.923 - - - - 0.755 - - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
31. murcb murcb 13655 1.671 - - - - - - 0.743 - 0.928
32. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.65 - 0.831 - - - - 0.819 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
33. ITGB1BP2 ENSDARG00000030176 2472 1.647 - - - - - 0.811 0.836 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
34. calcrla ENSDARG00000011473 1324 1.637 - 0.920 - - - - 0.717 - - calcitonin receptor-like a [Source:ZFIN;Acc:ZDB-GENE-040822-26]
35. cox6b1 ENSDARG00000045230 1819 1.634 - 0.908 - - - - 0.726 - - cytochrome c oxidase subunit 6B1 [Source:ZFIN;Acc:ZDB-GENE-040718-448]
36. mllt10 ENSDARG00000045401 7557 1.633 - - - - - 0.709 - - 0.924 MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
37. cdh5 ENSDARG00000075549 2288 1.622 - - - - - 0.790 0.832 - - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
38. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 1.595 - - - - - 0.838 0.757 - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
39. clec14a ENSDARG00000103533 718 1.591 0.749 - - - - - 0.842 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
40. ppp1r14c ENSDARG00000077341 1587 1.59 - - - - - 0.762 0.828 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
41. nid1a ENSDARG00000068710 3948 1.584 - - - - - 0.773 0.811 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
42. glod4 ENSDARG00000042509, ENSDARG00000113811 297 1.584 - - - - - 0.797 0.787 - - glyoxalase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040912-38]
43. myod1 ENSDARG00000030110 6019 1.58 - - - - - 0.794 0.786 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
44. lmo2 ENSDARG00000095019 1098 1.578 0.721 - - - - - 0.857 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
45. mrpl54 ENSDARG00000071468 2715 1.575 - - - - - 0.778 0.797 - - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
46. COMP 2018 1.57 0.804 - - - - - 0.766 - - cartilage oligomeric matrix protein, transcript variant X1
47. si:dkey-261h17.1 ENSDARG00000095268 11403 1.569 0.804 - - - - - 0.765 - - si:dkey-261h17.1 [Source:ZFIN;Acc:ZDB-GENE-030829-14]
48. lin7a ENSDARG00000013414 1589 1.569 - - - - - 0.849 0.720 - - lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
49. colec12 ENSDARG00000061140 1323 1.558 0.824 - - - - - 0.734 - - collectin sub-family member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9807]
50. vsg1 1870 1.546 0.710 - - - - - 0.836 - - vessel-specific 1
51. cmya5 ENSDARG00000061379 1423 1.541 - - - - - 0.813 0.728 - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
52. tfr1b_1 ENSDARG00000077372, ENSDARG00000112880 343 1.541 - - - - - 0.765 0.776 - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
53. lingo3a ENSDARG00000061970 234 1.528 - - - - - 0.822 0.706 - - leucine rich repeat and Ig domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-060503-54]
54. arap3 ENSDARG00000076801 725 1.527 0.721 - - - - - 0.806 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
55. atp5ib 19664 1.525 - 0.809 - - - - 0.716 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Eb
56. CT583658.1 CT583658.1 561 1.523 0.749 - - - - - 0.774 - -
57. bcl2l13 ENSDARG00000062370, ENSDARG00000111116 3206 1.523 - - - - - 0.758 0.765 - - BCL2 like 13 [Source:ZFIN;Acc:ZDB-GENE-050419-215]
58. pdcd2l ENSDARG00000002754 417 1.521 - - - - - 0.771 0.750 - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
59. gyg1b ENSDARG00000059391 389 1.516 - - - - - 0.769 0.747 - - glycogenin 1b [Source:ZFIN;Acc:ZDB-GENE-040625-30]
60. fkbp1b ENSDARG00000052625 883 1.507 - - - - - 0.789 0.718 - - FK506 binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1785]
61. mrps6 ENSDARG00000039543 1892 1.501 - - - - - 0.761 0.740 - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
62. CABZ01068274.1 CABZ01068274.1 193 1.5 - - - - - 0.704 0.796 - -
63. tomm34 ENSDARG00000001557 1874 1.496 - - - - - 0.757 0.739 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
64. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.487 - - - - - 0.738 0.749 - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
65. hibadhb ENSDARG00000007959 4858 1.483 - - - - - 0.766 0.717 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
66. klhl31 ENSDARG00000039066 13656 1.481 - 0.763 - 0.718 - - - - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
67. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.48 0.718 - - - - 0.762 - - -
68. akap6 ENSDARG00000077295 1382 1.479 - - - - - 0.760 0.719 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
69. noc3l ENSDARG00000002487 230 1.475 - - - - - 0.728 0.747 - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
70. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.467 0.760 - - - - - 0.707 - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
71. ms4a17a.14 829 1.466 - - - - - 0.745 0.721 - - membrane-spanning 4-domains, subfamily A, member 17A.14
72. npr1a ENSDARG00000031751 517 1.465 - - - - - 0.745 0.720 - - natriuretic peptide receptor 1a [Source:ZFIN;Acc:ZDB-GENE-060503-539]
73. tmem182 tmem182 12589 1.458 - - - - - 0.701 0.757 - -
74. fmnl3 ENSDARG00000004372 821 1.457 0.712 - - - - 0.745 - - - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
75. cdc34a ENSDARG00000069708 1145 1.454 - - - - - 0.714 0.740 - - cell division cycle 34 homolog (S. cerevisiae) a [Source:ZFIN;Acc:ZDB-GENE-040426-713]
76. PTPLA PTPLA 4044 1.452 - - - 0.716 - - 0.736 - -
77. mrpl38 ENSDARG00000039667 1145 1.452 - - - - - 0.748 0.704 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
78. myom1a ENSDARG00000061249 10230 1.444 - - - - - 0.730 0.714 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
79. chchd4 chchd4 785 1.439 - - - - - 0.725 0.714 - -
80. faua ENSDARG00000099022 82901 1.438 - 0.716 - - - - 0.722 - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
81. ATP5J_2 ATP5J_2 2381 1.43 - - - - - 0.703 0.727 - -
82. vwde ENSDARG00000103443 5758 1.43 0.711 - - 0.719 - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
83. chrna1 ENSDARG00000009021 2931 1.423 - - - - - 0.711 0.712 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
84. mrps23 ENSDARG00000033973 2265 1.42 0.700 - - - - - 0.720 - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
85. CT955963.1 ENSDARG00000100370 23 1.417 - - - - - 0.711 0.706 - -
86. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.405 - - - - - 0.701 0.704 - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
87. ccng2 ENSDARG00000017602 3141 0.996 - 0.996 - - - - - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
88. ppargc1b ENSDARG00000101569 3452 0.996 - - - - - - - - 0.996 peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
89. serpinh1b ENSDARG00000019949 11693 0.996 - 0.996 - - - - - - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
90. nbr1 nbr1 1161 0.995 - - - - - - - - 0.995
91. rgs19 ENSDARG00000077385 783 0.995 - - - - - - - - 0.995 regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
92. BAX BAX 1673 0.995 - - - - - - - - 0.995
93. rcbtb2 ENSDARG00000090687 1658 0.995 - - - - - - - - 0.995 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
94. zgc:110843 ENSDARG00000073845 940 0.995 - - - - - - - - 0.995 zgc:110843 [Source:ZFIN;Acc:ZDB-GENE-050327-15]
95. C25H12orf73 C25H12orf73 2031 0.995 - - - - - - - - 0.995
96. carhsp1 ENSDARG00000053129 2100 0.995 - - - - - - - - 0.995 calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
97. cacna1sb ENSDARG00000042552 1320 0.995 - - - - - - - - 0.995 calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
98. PPFIBP1_1 PPFIBP1_1 2256 0.995 - 0.995 - - - - - - -
99. tlk1b ENSDARG00000100715 1153 0.995 - - - - - - - - 0.995 tousled-like kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4933]
100. hnrnpul1 ENSDARG00000040564 6550 0.995 - 0.995 - - - - - - - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]

There are 1428 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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