Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col2a1a

Gene Name Gene ID Reads Annotation
col2a1a ENSDARG00000069093, ENSDARG00000111202 50276 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]










Genes with expression patterns similar to col2a1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col2a1a ENSDARG00000069093, ENSDARG00000111202 50276 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
2. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 3.389 0.961 - - 0.735 - 0.983 - 0.710 - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
3. epyc ENSDARG00000056950 7783 2.734 0.961 - 0.804 - - 0.969 - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
4. col9a3 ENSDARG00000037845 6564 2.617 0.931 - - - - 0.982 0.704 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
5. col9a1 col9a1 34481 2.58 0.918 - - 0.751 - 0.911 - - -
6. cmn ENSDARG00000055527 14039 2.506 0.950 - - 0.726 - 0.830 - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
7. col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 2.492 0.917 - - - 0.754 0.821 - - - collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
8. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.323 - - 0.858 0.710 0.755 - - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
9. zgc:66286 zgc:66286 118947 2.314 0.774 - 0.750 - 0.790 - - - -
10. myhz2 ENSDARG00000012944 69921 2.207 0.785 0.705 - - - 0.717 - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
11. jph2 ENSDARG00000028625 6706 2.184 0.734 0.714 0.736 - - - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
12. CABZ01044297.1 CABZ01044297.1 2015 1.902 0.913 - - - - 0.989 - - -
13. si:dkeyp-12a9.5 3058 1.869 0.909 - - - - 0.960 - - - si:dkeyp-12a9.5
14. ntd5 ENSDARG00000040944 4988 1.85 0.946 - - - - 0.904 - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
15. pi15a ENSDARG00000045378 2361 1.845 0.900 - - - - 0.945 - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
16. col9a2 ENSDARG00000024492 20234 1.844 0.962 - - - - 0.882 - - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
17. PAQR4 PAQR4 2150 1.83 0.894 - - - - 0.936 - - -
18. tgfbi ENSDARG00000071586 17779 1.824 0.902 - - - - 0.922 - - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
19. ntla ntla 926 1.814 0.843 - - - - 0.971 - - -
20. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.804 0.907 - - - - 0.897 - - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
21. susd5 ENSDARG00000088277 439 1.797 0.873 - - - - 0.924 - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
22. CABZ01079764.1 CABZ01079764.1 12103 1.788 0.828 - - - - 0.960 - - -
23. chad ENSDARG00000045071 903 1.773 0.810 - - - - 0.963 - - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
24. plod2 ENSDARG00000011821 1656 1.761 0.840 - - - - 0.921 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
25. COBLL1_1 COBLL1_1 787 1.757 0.841 - - - - 0.916 - - -
26. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.731 0.807 - - - - 0.924 - - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
27. ucmab ENSDARG00000005485 1808 1.73 0.773 - - - - 0.957 - - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
28. BX470254.1 ENSDARG00000097402 1389 1.715 0.898 - - - - 0.817 - - -
29. CU469518.1 CU469518.1 214 1.708 0.831 - - - - 0.877 - - -
30. acana ENSDARG00000035891 118 1.681 0.769 - - - - 0.912 - - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
31. PLXDC2 ENSDARG00000059950 220 1.668 0.864 - - - - 0.804 - - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
32. zgc:194470 zgc:194470 210 1.665 0.791 - - - - 0.874 - - -
33. zgc:86725 2559 1.662 0.891 - - - - 0.771 - - - zgc:86725
34. si:dkey-6n6.1 ENSDARG00000062487 222 1.646 0.721 - - - - 0.925 - - - si:dkey-6n6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-80]
35. tppp3 ENSDARG00000030463 992 1.619 0.729 - - - - 0.890 - - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
36. IGSF10 ENSDARG00000077497 317 1.605 0.770 - - - - 0.835 - - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
37. myhc4 ENSDARG00000035438 1322 1.594 0.808 - - - - 0.786 - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
38. tgm2l ENSDARG00000093381 218 1.592 0.748 - - - - 0.844 - - - transglutaminase 2, like [Source:ZFIN;Acc:ZDB-GENE-050420-97]
39. tpm2 ENSDARG00000104682 36853 1.592 0.782 - - - 0.810 - - - - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
40. golim4b ENSDARG00000014545 628 1.59 0.774 - - - - 0.816 - - - golgi integral membrane protein 4b [Source:ZFIN;Acc:ZDB-GENE-050327-74]
41. mxra8a ENSDARG00000062222 530 1.574 0.801 - - - - 0.773 - - - matrix-remodelling associated 8a [Source:ZFIN;Acc:ZDB-GENE-060503-671]
42. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 1.569 - - - 0.786 - - 0.783 - - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
43. ptrfa ptrfa 4363 1.546 0.823 - - - - 0.723 - - -
44. pdlim7 ENSDARG00000103854 465 1.54 0.704 - - - - 0.836 - - - PDZ and LIM domain 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2092]
45. myl10 ENSDARG00000062592 101207 1.539 0.723 - - - 0.816 - - - - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
46. SLC3A2_1 SLC3A2_1 358 1.538 0.752 - - - - 0.786 - - -
47. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 1.532 0.743 - - - - 0.789 - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
48. si:ch211-32p8.1 si:ch211-32p8.1 3402 1.528 0.799 - - - - 0.729 - - -
49. dtnba ENSDARG00000077694 5483 1.527 0.758 - - - - 0.769 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
50. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 1.521 0.729 - - - 0.792 - - - - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
51. col5a1 ENSDARG00000012593 24177 1.513 - - - 0.803 - - - 0.710 - procollagen, type V, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-041105-6]
52. tnnt2c ENSDARG00000032242 28801 1.51 0.767 - - - 0.743 - - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
53. C12H10orf71 C12H10orf71 595 1.506 0.733 - - - - 0.773 - - -
54. murca murca 6614 1.499 0.796 - - - - - 0.703 - -
55. aqp4 ENSDARG00000010565 624 1.49 0.713 - - - - 0.777 - - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
56. hsp90aa1.1 ENSDARG00000010478 47784 1.485 - - 0.722 - 0.763 - - - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
57. actn3b ENSDARG00000001431 15747 1.484 0.734 - - - - - 0.750 - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
58. loxl3b ENSDARG00000039563 1657 1.461 0.756 - - - - 0.705 - - - lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]
59. nexn ENSDARG00000057317 10972 1.457 0.751 - - - 0.706 - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
60. ttnb ttnb 73721 1.454 - - - - 0.745 0.709 - - -
61. ITGB1BP2 ENSDARG00000030176 2472 1.44 0.724 - - - 0.716 - - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
62. loxl5b ENSDARG00000076904 468 1.438 0.719 - - - - 0.719 - - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
63. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.435 - - - - 0.726 0.709 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
64. loxl1 ENSDARG00000054451 2485 0.991 - - - - - 0.991 - - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
65. matn3a ENSDARG00000069245 2410 0.982 - - - - - 0.982 - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
66. BX842614.2 BX842614.2 799 0.959 - - - - - 0.959 - - -
67. col11a2 ENSDARG00000012422 3204 0.943 0.943 - - - - - - - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
68. matn3b ENSDARG00000069265 856 0.942 - - - - - 0.942 - - - matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
69. si:ch211-226o13.2 84923 0.937 - 0.937 - - - - - - - si:ch211-226o13.2
70. plcl1 ENSDARG00000067676 2457 0.929 - - - - - 0.929 - - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
71. tgfb3 ENSDARG00000019367 2327 0.906 - - - - - 0.906 - - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
72. sncga ENSDARG00000034423, ENSDARG00000112260 5469 0.905 - - - - - 0.905 - - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
73. LRRC29 ENSDARG00000076425 284 0.904 - - - - - 0.904 - - - leucine rich repeat containing 29 [Source:ZFIN;Acc:ZDB-GENE-030131-7165]
74. col27a1a 1747 0.903 - - - - - 0.903 - - - collagen, type XXVII, alpha 1a
75. COLGALT2 ENSDARG00000014670 63 0.899 - - - - - 0.899 - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
76. fam46bb 601 0.898 - - - - - 0.898 - - - family with sequence similarity 46, member Bb
77. CU972452.1 CU972452.1 1046 0.891 - - - - - 0.891 - - -
78. lect1 7551 0.89 0.890 - - - - - - - - leukocyte cell derived chemotaxin 1, transcript variant X1
79. zgc:153629 zgc:153629 1121 0.888 - - - - - 0.888 - - -
80. BX322608.1 ENSDARG00000111690 326 0.884 0.884 - - - - - - - -
81. mmp23bb ENSDARG00000009825 133 0.88 - - - - - 0.880 - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
82. plcd4a ENSDARG00000057975 241 0.877 - - - - - 0.877 - - - phospholipase C, delta 4a [Source:ZFIN;Acc:ZDB-GENE-050208-654]
83. loxl2a ENSDARG00000044010 1906 0.873 0.873 - - - - - - - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
84. CR847510.1 CR847510.1 629 0.871 - - - - - 0.871 - - -
85. scara3 ENSDARG00000008060 169 0.864 - - - - - 0.864 - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
86. ism1 ENSDARG00000020541 1241 0.859 - - - - - 0.859 - - - isthmin 1 [Source:ZFIN;Acc:ZDB-GENE-050523-3]
87. mef2ca ENSDARG00000029764 18547 0.851 - - - - 0.851 - - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
88. CABZ01026370.1 CABZ01026370.1 286 0.851 - - - - - 0.851 - - -
89. pkmb ENSDARG00000099860 25094 0.85 0.850 - - - - - - - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
90. nkx3.2 ENSDARG00000037639 575 0.85 - - - - - 0.850 - - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
91. eng1a eng1a 484 0.84 - - - - - 0.840 - - -
92. smtnl1 ENSDARG00000041257 7410 0.839 0.839 - - - - - - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
93. desma ENSDARG00000058656 30292 0.834 0.834 - - - - - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
94. speg speg 334 0.833 0.833 - - - - - - - -
95. oep oep 261 0.832 - - - - - 0.832 - - -
96. plod1a ENSDARG00000059746 3364 0.83 - - - - - 0.830 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
97. hbegfb ENSDARG00000031246 236 0.827 0.827 - - - - - - - - heparin-binding EGF-like growth factor b [Source:ZFIN;Acc:ZDB-GENE-070820-6]
98. ehd2 ehd2 1089 0.824 - - - - - 0.824 - - -
99. bmpr1bb ENSDARG00000102742 1036 0.824 - - - - - 0.824 - - - bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
100. ptrfb ptrfb 567 0.823 0.823 - - - - - - - -

There are 279 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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