Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col28a1

Gene Name Gene ID Reads Annotation
col28a1 col28a1 5










Genes with expression patterns similar to col28a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col28a1 col28a1 5 5 1.000 1.000 - - 1.000 - 1.000 - 1.000
2. ndufv3_1 ENSDARG00000090389 25 2.46 0.859 - - - - - 0.820 - 0.781 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
3. ETS1 ENSDARG00000024431 6 2 1.000 - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
4. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 2 1.000 1.000 - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
5. fam163b ENSDARG00000073914 46 2 1.000 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
6. camk1db ENSDARG00000017446 47 2 - 1.000 - - - - 1.000 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
7. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 2 1.000 - - - - - 1.000 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
8. SNORA81_1 SNORA81_1 8 2 1.000 1.000 - - - - - - -
9. si:ch211-170d12.2 si:ch211-170d12.2 1 2 1.000 - - - 1.000 - - - -
10. vmhcl 119 2 1.000 - - - - - 1.000 - - ventricular myosin heavy chain-like
11. tbx5b ENSDARG00000092060 37 2 1.000 1.000 - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
12. ddx26b 79 2 1.000 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
13. hoxc9a ENSDARG00000092809 18 2 1.000 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
14. irgq2 ENSDARG00000068657 4 2 1.000 - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
15. si:ch211-10p21.1 si:ch211-10p21.1 6 2 1.000 - - - 1.000 - - - -
16. arl11l arl11l 31 2 1.000 1.000 - - - - - - -
17. GMEB2 ENSDARG00000093240 6 2 1.000 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
18. ifit2 ifit2 11 2 1.000 1.000 - - - - - - -
19. SRCIN1_1 SRCIN1_1 11 1.942 - 1.000 - - 0.942 - - - -
20. si:dkeyp-46h3.2 ENSDARG00000092498 23 1.942 - - - - 0.942 - 1.000 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
21. ARHGAP17 ARHGAP17 29 1.897 1.000 - - - 0.897 - - - -
22. BX119963.1 ENSDARG00000096135 28 1.892 1.000 - - - - - 0.892 - -
23. ABCA7 ABCA7 12 1.829 - 1.000 - - - - - - 0.829
24. si:ch211-176g6.1 ENSDARG00000096522 8 1.829 - 1.000 - - - - - - 0.829 si:ch211-176g6.1 [Source:ZFIN;Acc:ZDB-GENE-121214-106]
25. si:ch211-13k12.1 si:ch211-13k12.1 25 1.822 - 1.000 - - - - 0.822 - -
26. ZBTB40 ENSDARG00000091762 57 1.822 1.000 - - - - - 0.822 - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
27. adck3 83 1.772 1.000 - - - - - 0.772 - - aarF domain containing kinase 3
28. adam10b ENSDARG00000015502 26 1.757 1.000 - - - 0.757 - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
29. cpeb1a ENSDARG00000045932 81 1.737 0.915 0.822 - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
30. abcc6a ENSDARG00000016750 10 1.702 - 1.000 - - - - 0.702 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
31. SLC15A5 ENSDARG00000089974 18 1.685 - - - - 0.782 - 0.903 - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
32. wu:fe36b12 wu:fe36b12 118 1.566 - 0.844 - - - - 0.722 - -
33. lbx1b ENSDARG00000018611 399 1.498 - 0.789 - - - - 0.709 - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
34. casz1 ENSDARG00000037030 85 1.414 0.702 - - - - - 0.712 - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
35. FAM177A1 ENSDARG00000079636 19 1 1.000 - - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
36. pdia2 ENSDARG00000018263 74 1 - 1.000 - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
37. zbtb20 ENSDARG00000005586 195 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
38. AL935186.2 ENSDARG00000097345 6 1 1.000 - - - - - - - -
39. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
40. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
41. zgc:195195 zgc:195195 6 1 - 1.000 - - - - - - -
42. FP103005.1 ENSDARG00000099852 4 1 - - - - - - 1.000 - -
43. sc:d136 sc:d136 2 1 - 1.000 - - - - - - -
44. CU928217.1 CU928217.1 12 1 - 1.000 - - - - - - -
45. CLDN20 26 1 - 1.000 - - - - - - - claudin 20, transcript variant X2
46. CABZ01079304.1 CABZ01079304.1 7 1 1.000 - - - - - - - -
47. Metazoa_SRP_23 Metazoa_SRP_23 3 1 1.000 - - - - - - - -
48. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 1 1.000 - - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
49. zgc:110434 21 1 - 1.000 - - - - - - - zgc:110434
50. si:ch211-215m21.17 si:ch211-215m21.17 14 1 - 1.000 - - - - - - -
51. si:dkey-13d5.1 si:dkey-13d5.1 3 1 - 1.000 - - - - - - -
52. mthfd2l ENSDARG00000054199 25 1 - 1.000 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-5707]
53. map3k12 ENSDARG00000103651 3 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 12 [Source:ZFIN;Acc:ZDB-GENE-040426-2436]
54. si:dkey-43b14.8 35 1 - 1.000 - - - - - - - si:dkey-43b14.8
55. GPR116_3 GPR116_3 9 1 1.000 - - - - - - - -
56. sult2st3 ENSDARG00000028367 79 1 1.000 - - - - - - - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
57. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
58. tacr1b ENSDARG00000102900 1 1 - - - - - - 1.000 - - tachykinin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-091117-17]
59. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 1.000 - - - - - - - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
60. tob1a ENSDARG00000032619 3 1 1.000 - - - - - - - - transducer of ERBB2, 1a [Source:ZFIN;Acc:ZDB-GENE-031030-4]
61. ucp3 ENSDARG00000091209 137 1 1.000 - - - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
62. stoml3b ENSDARG00000057035 15 1 - - - - 1.000 - - - - stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
63. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1 - 1.000 - - - - - - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
64. CABZ01030107.1 ENSDARG00000058631 52 1 - 1.000 - - - - - - -
65. si:ch211-113a14.15_1 2 1 - 1.000 - - - - - - - si:ch211-113a14.15
66. zgc:173713 17 1 - 1.000 - - - - - - - zgc:173713, transcript variant X2
67. si:ch73-127m5.1 ENSDARG00000060680 253 1 - 1.000 - - - - - - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
68. cmlc1 ENSDARG00000032976 455 1 1.000 - - - - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
69. cdk20 ENSDARG00000003867 27 1 - 1.000 - - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
70. bmpr2b ENSDARG00000020057 8 1 1.000 - - - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
71. cacng3b ENSDARG00000076401 91 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
72. ssh1b ENSDARG00000010031 4 1 1.000 - - - - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
73. epsti1 ENSDARG00000094578 33 1 - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
74. sox17 ENSDARG00000101717 11 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
75. si:ch211-122i22.6 si:ch211-122i22.6 1 1 1.000 - - - - - - - -
76. nebl ENSDARG00000021200 40 1 - 1.000 - - - - - - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
77. SLC39A8 ENSDARG00000056757 52 1 1.000 - - - - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
78. THBS1_1 THBS1_1 6 1 - - - - 1.000 - - - -
79. FGFBP2 FGFBP2 16 1 - - - - - - 1.000 - -
80. zgc:113210 ENSDARG00000002872 99 1 - 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
81. si:ch211-286b5.9 ENSDARG00000086166 27 1 - 1.000 - - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
82. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1 1.000 - - - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
83. CU914780.1 ENSDARG00000114023 105 1 - 1.000 - - - - - - -
84. si:dkey-31m5.3 ENSDARG00000110121 1 1 - - - - - - 1.000 - - si:dkey-31m5.3 [Source:ZFIN;Acc:ZDB-GENE-070912-515]
85. abcc9 ENSDARG00000015985 20 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
86. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - 1.000 - - - - - - -
87. si:rp71-17i16.7 si:rp71-17i16.7 0 1 - 1.000 - - - - - - -
88. cdc73 ENSDARG00000020201 22 1 1.000 - - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
89. tecrl2 tecrl2 11 1 - 1.000 - - - - - - -
90. klf5b ENSDARG00000062106 7 1 - 1.000 - - - - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
91. si:ch211-195h23.4 ENSDARG00000093337 1 1 - 1.000 - - - - - - - si:ch211-195h23.4 [Source:ZFIN;Acc:ZDB-GENE-070912-175]
92. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1 1.000 - - - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
93. anks1aa ENSDARG00000062396 1 1 1.000 - - - - - - - - ankyrin repeat and sterile alpha motif domain containing 1Aa [Source:ZFIN;Acc:ZDB-GENE-090312-152]
94. RIMS1 RIMS1 9 1 - 1.000 - - - - - - -
95. spata20 ENSDARG00000013880 46 1 - 1.000 - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
96. ppp6r2a ENSDARG00000045540 60 1 - - - - - - 1.000 - - protein phosphatase 6, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5428]
97. FMN1 ENSDARG00000011975 2 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
98. FP565458.1 FP565458.1 61 1 1.000 - - - - - - - -
99. nfixa ENSDARG00000043226 14 1 - 1.000 - - - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
100. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 - 1.000 - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]

There are 985 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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