Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col28a1

Gene Name Gene ID Reads Annotation
col28a1 col28a1 5










Genes with expression patterns similar to col28a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col28a1 col28a1 5 5 1.000 1.000 - - 1.000 - 1.000 - 1.000
2. ndufv3_1 ENSDARG00000090389 25 2.46 0.859 - - - - - 0.820 - 0.781 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
3. irgq2 ENSDARG00000068657 4 2 1.000 - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
4. camk1db ENSDARG00000017446 47 2 - 1.000 - - - - 1.000 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
5. vmhcl 119 2 1.000 - - - - - 1.000 - - ventricular myosin heavy chain-like
6. tbx5b ENSDARG00000092060 37 2 1.000 1.000 - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
7. GMEB2 ENSDARG00000093240 6 2 1.000 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
8. SNORA81_1 SNORA81_1 8 2 1.000 1.000 - - - - - - -
9. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 2 1.000 1.000 - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
10. ETS1 ENSDARG00000024431 6 2 1.000 - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
11. si:ch211-170d12.2 si:ch211-170d12.2 1 2 1.000 - - - 1.000 - - - -
12. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 2 1.000 - - - - - 1.000 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
13. arl11l arl11l 31 2 1.000 1.000 - - - - - - -
14. fam163b ENSDARG00000073914 46 2 1.000 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
15. ddx26b 79 2 1.000 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
16. hoxc9a ENSDARG00000092809 18 2 1.000 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
17. si:ch211-10p21.1 si:ch211-10p21.1 6 2 1.000 - - - 1.000 - - - -
18. ifit2 ifit2 11 2 1.000 1.000 - - - - - - -
19. SRCIN1_1 SRCIN1_1 11 1.942 - 1.000 - - 0.942 - - - -
20. si:dkeyp-46h3.2 ENSDARG00000092498 23 1.942 - - - - 0.942 - 1.000 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
21. ARHGAP17 ARHGAP17 29 1.897 1.000 - - - 0.897 - - - -
22. BX119963.1 ENSDARG00000096135 28 1.892 1.000 - - - - - 0.892 - -
23. ABCA7 ABCA7 12 1.829 - 1.000 - - - - - - 0.829
24. si:ch211-176g6.1 ENSDARG00000096522 8 1.829 - 1.000 - - - - - - 0.829 si:ch211-176g6.1 [Source:ZFIN;Acc:ZDB-GENE-121214-106]
25. si:ch211-13k12.1 si:ch211-13k12.1 25 1.822 - 1.000 - - - - 0.822 - -
26. ZBTB40 ENSDARG00000091762 57 1.822 1.000 - - - - - 0.822 - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
27. adck3 83 1.772 1.000 - - - - - 0.772 - - aarF domain containing kinase 3
28. adam10b ENSDARG00000015502 26 1.757 1.000 - - - 0.757 - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
29. cpeb1a ENSDARG00000045932 81 1.737 0.915 0.822 - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
30. abcc6a ENSDARG00000016750 10 1.702 - 1.000 - - - - 0.702 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
31. SLC15A5 ENSDARG00000089974 18 1.685 - - - - 0.782 - 0.903 - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
32. wu:fe36b12 wu:fe36b12 118 1.566 - 0.844 - - - - 0.722 - -
33. lbx1b ENSDARG00000018611 399 1.498 - 0.789 - - - - 0.709 - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
34. casz1 ENSDARG00000037030 85 1.414 0.702 - - - - - 0.712 - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
35. BX119910.6 BX119910.6 11 1 1.000 - - - - - - - -
36. ttc22 ENSDARG00000077836 21 1 1.000 - - - - - - - - tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
37. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
38. cyp19a1b ENSDARG00000098360 8 1 1.000 - - - - - - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
39. myo5ab ENSDARG00000025218 14 1 1.000 - - - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
40. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
41. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]
42. si:ch211-214p16.1 ENSDARG00000044129 64 1 - 1.000 - - - - - - - si:ch211-214p16.1 [Source:NCBI gene;Acc:368901]
43. si:dkey-19f21.8 si:dkey-19f21.8 12 1 - 1.000 - - - - - - -
44. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
45. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 1.000 - - - - - - - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
46. map3k12 ENSDARG00000103651 3 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 12 [Source:ZFIN;Acc:ZDB-GENE-040426-2436]
47. U6_20 U6_20 0 1 - 1.000 - - - - - - -
48. slc17a6b ENSDARG00000041150 823 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
49. si:dkey-43b14.8 35 1 - 1.000 - - - - - - - si:dkey-43b14.8
50. sc:d136 sc:d136 2 1 - 1.000 - - - - - - -
51. TGM1 ENSDARG00000017799 3 1 - 1.000 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
52. ascc2 ENSDARG00000013058 228 1 - 1.000 - - - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
53. TRPC4_1 TRPC4_1 212 1 - 1.000 - - - - - - -
54. ubxn10 ENSDARG00000052535 24 1 1.000 - - - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
55. olfcs2 ENSDARG00000100451 1 1 1.000 - - - - - - - - olfactory receptor C family, s2 [Source:ZFIN;Acc:ZDB-GENE-060503-238]
56. or111-3 ENSDARG00000086633 1 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
57. FAM177A1 ENSDARG00000079636 19 1 1.000 - - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
58. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - 1.000 - - - - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
59. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1 - 1.000 - - - - - - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
60. C4H12orf55 C4H12orf55 14 1 - - - - - - 1.000 - -
61. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - 1.000 - - - - - - -
62. myo3b ENSDARG00000006892 0 1 - 1.000 - - - - - - - myosin IIIB [Source:ZFIN;Acc:ZDB-GENE-070706-2]
63. HTR1E 103 1 1.000 - - - - - - - - 5-hydroxytryptamine receptor 1E
64. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1 - 1.000 - - - - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
65. CU183952.2 CU183952.2 6 1 - - - - - - 1.000 - -
66. baiap2l1b ENSDARG00000031119 71 1 - 1.000 - - - - - - - BAI1-associated protein 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-050417-371]
67. BX537305.1 ENSDARG00000113834 10 1 - 1.000 - - - - - - -
68. si:ch211-160d14.9 8 1 1.000 - - - - - - - - si:ch211-160d14.9, transcript variant X1
69. si:ch73-30l9.1 ENSDARG00000095891 42 1 - - - - - - 1.000 - - si:ch73-30l9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-132]
70. pxmp2 ENSDARG00000003144 50 1 - - - - - - 1.000 - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
71. si:dkey-71p21.13 ENSDARG00000076139 1 1 - - - - 1.000 - - - - si:dkey-71p21.13 [Source:ZFIN;Acc:ZDB-GENE-090313-327]
72. si:ch211-38m6.6 ENSDARG00000076959 12 1 - 1.000 - - - - - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
73. runx2b ENSDARG00000059233 106 1 - - - - - - 1.000 - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
74. U6_23 U6_23 0 1 - 1.000 - - - - - - -
75. stoml3a ENSDARG00000079914 4 1 - - - - - - 1.000 - - stomatin (EPB72)-like 3a [Source:ZFIN;Acc:ZDB-GENE-070620-18]
76. BX005421.4 BX005421.4 11 1 - - - - - - 1.000 - -
77. zgc:153654 ENSDARG00000060322 9 1 - 1.000 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
78. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - 1.000 - - - - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
79. tap1 ENSDARG00000079766 75 1 - 1.000 - - - - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
80. galca ENSDARG00000037064 12 1 - - - - - - 1.000 - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
81. nkiras2_1 ENSDARG00000052594 31 1 - 1.000 - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
82. lingo1a ENSDARG00000034165 179 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
83. si:dkey-218i12.3 si:dkey-218i12.3 4 1 - - - - 1.000 - - - -
84. si:ch211-122l24.4 si:ch211-122l24.4 41 1 - 1.000 - - - - - - -
85. ddb1_1 ENSDARG00000074431 2 1 - - - - 1.000 - - - - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
86. TGFBR3L TGFBR3L 16 1 1.000 - - - - - - - -
87. ANKS1A ANKS1A 138 1 1.000 - - - - - - - -
88. dmbx1a ENSDARG00000009922 284 1 1.000 - - - - - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
89. FMN1 ENSDARG00000011975 2 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
90. stoml3b ENSDARG00000057035 15 1 - - - - 1.000 - - - - stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
91. gucy1b3 92 1 - 1.000 - - - - - - - guanylate cyclase 1, soluble, beta 3
92. pla2g15 ENSDARG00000103271 4 1 1.000 - - - - - - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
93. bdnf ENSDARG00000018817 193 1 - 1.000 - - - - - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
94. PLCG2 ENSDARG00000068763 11 1 1.000 - - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
95. zgc:113210 ENSDARG00000002872 99 1 - 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
96. PEG3_37 PEG3_37 4 1 - 1.000 - - - - - - -
97. htr6 ENSDARG00000016095 9 1 - - - - - - 1.000 - - 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
98. aqp3b ENSDARG00000069518 80 1 1.000 - - - - - - - - aquaporin 3b [Source:ZFIN;Acc:ZDB-GENE-040724-66]
99. si:ch211-255i3.4 ENSDARG00000095152 7 1 1.000 - - - - - - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
100. si:dkey-157e10.5 si:dkey-157e10.5 1 1 1.000 - - - - - - - -

There are 985 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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