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Results for col28a1

Gene Name Gene ID Reads Annotation
col28a1 col28a1 5










Genes with expression patterns similar to col28a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col28a1 col28a1 5 5 1.000 1.000 - - 1.000 - 1.000 - 1.000
2. ndufv3_1 ENSDARG00000090389 25 2.46 0.859 - - - - - 0.820 - 0.781 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
3. ETS1 ENSDARG00000024431 6 2 1.000 - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
4. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 2 1.000 1.000 - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
5. si:ch211-170d12.2 si:ch211-170d12.2 1 2 1.000 - - - 1.000 - - - -
6. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 2 1.000 - - - - - 1.000 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
7. fam163b ENSDARG00000073914 46 2 1.000 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
8. ddx26b 79 2 1.000 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
9. arl11l arl11l 31 2 1.000 1.000 - - - - - - -
10. ifit2 ifit2 11 2 1.000 1.000 - - - - - - -
11. si:ch211-10p21.1 si:ch211-10p21.1 6 2 1.000 - - - 1.000 - - - -
12. hoxc9a ENSDARG00000092809 18 2 1.000 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
13. irgq2 ENSDARG00000068657 4 2 1.000 - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
14. camk1db ENSDARG00000017446 47 2 - 1.000 - - - - 1.000 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
15. vmhcl 119 2 1.000 - - - - - 1.000 - - ventricular myosin heavy chain-like
16. tbx5b ENSDARG00000092060 37 2 1.000 1.000 - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
17. GMEB2 ENSDARG00000093240 6 2 1.000 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
18. SNORA81_1 SNORA81_1 8 2 1.000 1.000 - - - - - - -
19. si:dkeyp-46h3.2 ENSDARG00000092498 23 1.942 - - - - 0.942 - 1.000 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
20. SRCIN1_1 SRCIN1_1 11 1.942 - 1.000 - - 0.942 - - - -
21. ARHGAP17 ARHGAP17 29 1.897 1.000 - - - 0.897 - - - -
22. BX119963.1 ENSDARG00000096135 28 1.892 1.000 - - - - - 0.892 - -
23. ABCA7 ABCA7 12 1.829 - 1.000 - - - - - - 0.829
24. si:ch211-176g6.1 ENSDARG00000096522 8 1.829 - 1.000 - - - - - - 0.829 si:ch211-176g6.1 [Source:ZFIN;Acc:ZDB-GENE-121214-106]
25. si:ch211-13k12.1 si:ch211-13k12.1 25 1.822 - 1.000 - - - - 0.822 - -
26. ZBTB40 ENSDARG00000091762 57 1.822 1.000 - - - - - 0.822 - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
27. adck3 83 1.772 1.000 - - - - - 0.772 - - aarF domain containing kinase 3
28. adam10b ENSDARG00000015502 26 1.757 1.000 - - - 0.757 - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
29. cpeb1a ENSDARG00000045932 81 1.737 0.915 0.822 - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
30. abcc6a ENSDARG00000016750 10 1.702 - 1.000 - - - - 0.702 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
31. SLC15A5 ENSDARG00000089974 18 1.685 - - - - 0.782 - 0.903 - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
32. wu:fe36b12 wu:fe36b12 118 1.566 - 0.844 - - - - 0.722 - -
33. lbx1b ENSDARG00000018611 399 1.498 - 0.789 - - - - 0.709 - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
34. casz1 ENSDARG00000037030 85 1.414 0.702 - - - - - 0.712 - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
35. mybl1 ENSDARG00000030999 158 1 - 1.000 - - - - - - - v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
36. zbtb20 ENSDARG00000005586 195 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
37. SLC39A8 ENSDARG00000056757 52 1 1.000 - - - - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
38. si:ch211-122l14.7 ENSDARG00000095576 5 1 - 1.000 - - - - - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
39. SOX8 SOX8 22 1 1.000 - - - - - - - -
40. Metazoa_SRP_23 Metazoa_SRP_23 3 1 1.000 - - - - - - - -
41. pcdh2ab7 7 1 - 1.000 - - - - - - - protocadherin 2 alpha b 7
42. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 1.000 - - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
43. zgc:113307 ENSDARG00000044894 17 1 - 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
44. trim46b ENSDARG00000058649 54 1 - 1.000 - - - - - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
45. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - 1.000 - - - - - - -
46. zap70 ENSDARG00000015752 1 1 1.000 - - - - - - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
47. cacna1ab ENSDARG00000006923 12 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
48. sox17 ENSDARG00000101717 11 1 - 1.000 - - - - - - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
49. abcc9 ENSDARG00000015985 20 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
50. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1 - 1.000 - - - - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
51. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - 1.000 - - - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
52. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - - - - - 1.000 - -
53. si:dkey-200l5.4 ENSDARG00000095294 13 1 - 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
54. cx39.4 ENSDARG00000070357 17 1 - 1.000 - - - - - - - connexin 39.4 [Source:ZFIN;Acc:ZDB-GENE-050616-6]
55. C5AR1 1 1 - - - - 1.000 - - - - C5a anaphylatoxin chemotactic receptor
56. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1 1.000 - - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
57. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
58. tmem44 ENSDARG00000068193 8 1 - 1.000 - - - - - - - transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
59. GPC6_1 GPC6_1 34 1 - 1.000 - - - - - - -
60. RIMS1 RIMS1 9 1 - 1.000 - - - - - - -
61. TMEM221 TMEM221 62 1 1.000 - - - - - - - -
62. mir184 48 1 - 1.000 - - - - - - - microRNA 184
63. si:ch73-127m5.1 ENSDARG00000060680 253 1 - 1.000 - - - - - - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
64. crtac1a ENSDARG00000059826 22 1 1.000 - - - - - - - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
65. smpd3 ENSDARG00000098226 1 1 1.000 - - - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
66. NPAS3 ENSDARG00000109820 362 1 - 1.000 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
67. her3 ENSDARG00000076857 131 1 - 1.000 - - - - - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
68. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
69. Metazoa_SRP_24 Metazoa_SRP_24 4 1 1.000 - - - - - - - -
70. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 - - - - 1.000 - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
71. si:dkey-26g8.9 si:dkey-26g8.9 2 1 1.000 - - - - - - - -
72. dcun1d5 ENSDARG00000100363 3 1 1.000 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
73. BX571739.1 BX571739.1 45 1 1.000 - - - - - - - -
74. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
75. si:dkey-95p16.1 ENSDARG00000092452 3 1 1.000 - - - - - - - - si:dkey-95p16.1 [Source:ZFIN;Acc:ZDB-GENE-081104-443]
76. C18H15orf59 C18H15orf59 80 1 - 1.000 - - - - - - -
77. si:ch73-7i4.1 ENSDARG00000094554 771 1 - - - - - - 1.000 - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
78. si:zfos-979f1.2 ENSDARG00000011652 24 1 1.000 - - - - - - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
79. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
80. zgc:172139 ENSDARG00000068830 10 1 - - - - - - 1.000 - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
81. CABZ01075242.1 ENSDARG00000114227 9 1 - 1.000 - - - - - - -
82. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1 1.000 - - - - - - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
83. ano2 ENSDARG00000101363 50 1 1.000 - - - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
84. CCDC134_1 CCDC134_1 200 1 1.000 - - - - - - - -
85. TMEM260 ENSDARG00000076362 63 1 1.000 - - - - - - - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
86. BX465203.2 BX465203.2 23 1 - - - - - - 1.000 - -
87. CABZ01086828.1 CABZ01086828.1 1 1 - 1.000 - - - - - - -
88. si:dkey-199m13.6 si:dkey-199m13.6 53 1 1.000 - - - - - - - -
89. klf6b ENSDARG00000038561 27 1 1.000 - - - - - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
90. CU694374.3 CU694374.3 28 1 1.000 - - - - - - - -
91. zgc:113426 ENSDARG00000051793 37 1 - 1.000 - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
92. MYO5B ENSDARG00000062003 2 1 - - - - 1.000 - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
93. CABZ01059923.1 CABZ01059923.1 0 1 - - - - 1.000 - - - -
94. uckl1a ENSDARG00000001686 21 1 - 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
95. si:dkey-93h22.6 si:dkey-93h22.6 7 1 - 1.000 - - - - - - -
96. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
97. mylk3 ENSDARG00000076348 19 1 - - - - - - 1.000 - - myosin light chain kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3497]
98. gp1bb ENSDARG00000074441 116 1 1.000 - - - - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
99. gfra3 ENSDARG00000087704 122 1 - 1.000 - - - - - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
100. epsti1 ENSDARG00000094578 33 1 - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]

There are 985 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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