Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col28a1

Gene Name Gene ID Reads Annotation
col28a1 col28a1 5










Genes with expression patterns similar to col28a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col28a1 col28a1 5 5 1.000 1.000 - - 1.000 - 1.000 - 1.000
2. ndufv3_1 ENSDARG00000090389 25 2.46 0.859 - - - - - 0.820 - 0.781 NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
3. arl11l arl11l 31 2 1.000 1.000 - - - - - - -
4. fam163b ENSDARG00000073914 46 2 1.000 1.000 - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
5. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 2 1.000 - - - - - 1.000 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
6. hoxc9a ENSDARG00000092809 18 2 1.000 1.000 - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
7. si:ch211-10p21.1 si:ch211-10p21.1 6 2 1.000 - - - 1.000 - - - -
8. si:ch211-170d12.2 si:ch211-170d12.2 1 2 1.000 - - - 1.000 - - - -
9. camk1db ENSDARG00000017446 47 2 - 1.000 - - - - 1.000 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
10. vmhcl 119 2 1.000 - - - - - 1.000 - - ventricular myosin heavy chain-like
11. GMEB2 ENSDARG00000093240 6 2 1.000 1.000 - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
12. ifit2 ifit2 11 2 1.000 1.000 - - - - - - -
13. SNORA81_1 SNORA81_1 8 2 1.000 1.000 - - - - - - -
14. tbx5b ENSDARG00000092060 37 2 1.000 1.000 - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
15. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 2 1.000 1.000 - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
16. ddx26b 79 2 1.000 1.000 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
17. ETS1 ENSDARG00000024431 6 2 1.000 - - - 1.000 - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
18. irgq2 ENSDARG00000068657 4 2 1.000 - - - 1.000 - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
19. SRCIN1_1 SRCIN1_1 11 1.942 - 1.000 - - 0.942 - - - -
20. si:dkeyp-46h3.2 ENSDARG00000092498 23 1.942 - - - - 0.942 - 1.000 - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
21. ARHGAP17 ARHGAP17 29 1.897 1.000 - - - 0.897 - - - -
22. BX119963.1 ENSDARG00000096135 28 1.892 1.000 - - - - - 0.892 - -
23. ABCA7 ABCA7 12 1.829 - 1.000 - - - - - - 0.829
24. si:ch211-176g6.1 ENSDARG00000096522 8 1.829 - 1.000 - - - - - - 0.829 si:ch211-176g6.1 [Source:ZFIN;Acc:ZDB-GENE-121214-106]
25. si:ch211-13k12.1 si:ch211-13k12.1 25 1.822 - 1.000 - - - - 0.822 - -
26. ZBTB40 ENSDARG00000091762 57 1.822 1.000 - - - - - 0.822 - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
27. adck3 83 1.772 1.000 - - - - - 0.772 - - aarF domain containing kinase 3
28. adam10b ENSDARG00000015502 26 1.757 1.000 - - - 0.757 - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
29. cpeb1a ENSDARG00000045932 81 1.737 0.915 0.822 - - - - - - - cytoplasmic polyadenylation element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-080723-42]
30. abcc6a ENSDARG00000016750 10 1.702 - 1.000 - - - - 0.702 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
31. SLC15A5 ENSDARG00000089974 18 1.685 - - - - 0.782 - 0.903 - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
32. wu:fe36b12 wu:fe36b12 118 1.566 - 0.844 - - - - 0.722 - -
33. lbx1b ENSDARG00000018611 399 1.498 - 0.789 - - - - 0.709 - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
34. casz1 ENSDARG00000037030 85 1.414 0.702 - - - - - 0.712 - - castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
35. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
36. TMEM260 ENSDARG00000076362 63 1 1.000 - - - - - - - - transmembrane protein 260 [Source:ZFIN;Acc:ZDB-GENE-030131-4198]
37. nebl ENSDARG00000021200 40 1 - 1.000 - - - - - - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
38. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - 1.000 - - - - - - -
39. or115-14 ENSDARG00000094235 17 1 1.000 - - - - - - - - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
40. TGFBR3L TGFBR3L 16 1 1.000 - - - - - - - -
41. slc17a6a ENSDARG00000001127 337 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
42. tmigd1 ENSDARG00000007040 19 1 - 1.000 - - - - - - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
43. runx2b ENSDARG00000059233 106 1 - - - - - - 1.000 - - runt-related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-040629-4]
44. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
45. cdc14aa ENSDARG00000013858 18 1 1.000 - - - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
46. CABZ01076534.1 CABZ01076534.1 1 1 1.000 - - - - - - - -
47. mlphb ENSDARG00000062481 14 1 - - - - - - 1.000 - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
48. dcun1d5 ENSDARG00000100363 3 1 1.000 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
49. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1 - 1.000 - - - - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
50. CU695076.1 CU695076.1 7 1 1.000 - - - - - - - -
51. si:dkey-21n8.3 si:dkey-21n8.3 5 1 1.000 - - - - - - - -
52. 5S_rRNA_10 5S_rRNA_10 2 1 1.000 - - - - - - - -
53. mir184 48 1 - 1.000 - - - - - - - microRNA 184
54. nfixa ENSDARG00000043226 14 1 - 1.000 - - - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
55. PLCG2 ENSDARG00000068763 11 1 1.000 - - - - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
56. gfra3 ENSDARG00000087704 122 1 - 1.000 - - - - - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
57. zgc:172051 ENSDARG00000086569 12 1 1.000 - - - - - - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
58. si:dkey-43b14.8 35 1 - 1.000 - - - - - - - si:dkey-43b14.8
59. SQLE SQLE 1 1 - - - - 1.000 - - - -
60. CU694951.2 CU694951.2 1 1 - - - - 1.000 - - - -
61. si:dkey-30j22.5 si:dkey-30j22.5 2 1 - - - - 1.000 - - - -
62. asf1ba_1 ENSDARG00000101037 3 1 - - - - 1.000 - - - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
63. slc26a6l ENSDARG00000054127 8 1 - 1.000 - - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
64. TMEM74 26 1 - 1.000 - - - - - - - transmembrane protein 74, transcript variant X3
65. slc17a6b ENSDARG00000041150 823 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
66. si:ch1073-15f19.2 ENSDARG00000095640 4 1 1.000 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
67. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1 - 1.000 - - - - - - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
68. zgc:172139 ENSDARG00000068830 10 1 - - - - - - 1.000 - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
69. AL935184.1 ENSDARG00000070039 1 1 1.000 - - - - - - - -
70. si:ch211-119o8.4 ENSDARG00000075562 1 1 1.000 - - - - - - - - si:ch211-119o8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-15]
71. ZNF337_16 ZNF337_16 22 1 - - - - - - 1.000 - -
72. irx4b ENSDARG00000036051 54 1 - - - - - - 1.000 - - iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]
73. lingo1a ENSDARG00000034165 179 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
74. crispld1a ENSDARG00000077275 7 1 - 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
75. ST3GAL1 ENSDARG00000079654 2 1 - - - - 1.000 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
76. GSTK1_2 GSTK1_2 8 1 - - - - - - 1.000 - -
77. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - 1.000 - - - -
78. si:dkeyp-46h3.4 si:dkeyp-46h3.4 1 1 1.000 - - - - - - - -
79. si:dkey-49o11.1 0 1 - 1.000 - - - - - - - si:dkey-49o11.1
80. mthfd2l ENSDARG00000054199 25 1 - 1.000 - - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-5707]
81. COBLL1 COBLL1 14 1 1.000 - - - - - - - -
82. C20H1orf95 C20H1orf95 12 1 - - - - - - 1.000 - -
83. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - 1.000 - - - - - - -
84. GRIK3 ENSDARG00000077715 178 1 - 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
85. DKK3 DKK3 12 1 - 1.000 - - - - - - -
86. si:ch211-160d14.9 8 1 1.000 - - - - - - - - si:ch211-160d14.9, transcript variant X1
87. ENSDARG00000088231 ENSDARG00000088231 0 1 - 1.000 - - - - - - -
88. FMN1 ENSDARG00000011975 2 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
89. si:ch211-141e20.2 ENSDARG00000093349 61 1 - 1.000 - - - - - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
90. CABZ01066439.2 CABZ01066439.2 5 1 - 1.000 - - - - - - -
91. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1 1.000 - - - - - - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
92. zgc:113307 ENSDARG00000044894 17 1 - 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
93. plekha7a ENSDARG00000060813 179 1 1.000 - - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
94. lmx1a ENSDARG00000020354 111 1 - 1.000 - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
95. si:dkey-189d19.1 si:dkey-189d19.1 2 1 1.000 - - - - - - - -
96. GJD2_1 GJD2_1 3045 1 - 1.000 - - - - - - -
97. sdhaf1 ENSDARG00000092478 51 1 - 1.000 - - - - - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
98. spata20 ENSDARG00000013880 46 1 - 1.000 - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
99. myo5ab ENSDARG00000025218 14 1 1.000 - - - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
100. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]

There are 985 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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