Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col1a2

Gene Name Gene ID Reads Annotation
col1a2 ENSDARG00000020007 36228 collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]










Genes with expression patterns similar to col1a2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col1a2 ENSDARG00000020007 36228 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
2. PSIP1 PSIP1 5252 2.414 0.761 0.893 - - - 0.760 - - -
3. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.174 0.722 - 0.708 - - - 0.744 - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
4. nr2f5 ENSDARG00000033172 11808 1.849 - 0.926 - - - - 0.923 - - nuclear receptor subfamily 2, group F, member 5 [Source:ZFIN;Acc:ZDB-GENE-990415-253]
5. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 1.84 - 0.905 - - - - 0.935 - - pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
6. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.798 - 0.867 - - - - 0.931 - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
7. fxr1 ENSDARG00000022968 2831 1.756 0.832 0.924 - - - - - - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
8. si:ch211-151o1.2 si:ch211-151o1.2 3580 1.736 0.828 0.908 - - - - - - -
9. snrpc ENSDARG00000009871 9567 1.719 - 0.947 - - - 0.772 - - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
10. calm1b ENSDARG00000034187 13158 1.708 0.797 - - - - - 0.911 - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
11. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.708 0.767 0.941 - - - - - - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
12. wdr5 ENSDARG00000016903 4834 1.68 - 0.915 - - - 0.765 - - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
13. adss ENSDARG00000002071 5497 1.667 0.714 0.953 - - - - - - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
14. msna ENSDARG00000058128, ENSDARG00000114614 23727 1.661 0.772 0.889 - - - - - - - moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
15. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 1.652 0.726 0.926 - - - - - - - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
16. gcdh gcdh 1390 1.652 0.719 - - - - - 0.933 - -
17. rbmx2 ENSDARG00000044380, ENSDARG00000115698 2528 1.641 - - - - - - 0.931 - 0.710 RNA binding motif protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88]
18. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.639 0.706 - - - - - 0.933 - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
19. pfdn4 ENSDARG00000061228 8266 1.634 - 0.919 0.715 - - - - - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
20. padi2 ENSDARG00000044167 6765 1.633 - 0.876 - - - 0.757 - - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
21. pdlim5b ENSDARG00000027600 4252 1.633 - 0.860 - - - 0.773 - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
22. SYNPO2L SYNPO2L 6697 1.629 0.707 0.922 - - - - - - -
23. si:ch211-160e1.5 5586 1.627 - 0.858 - - - 0.769 - - - si:ch211-160e1.5
24. fermt2 ENSDARG00000020242 9351 1.627 0.721 0.906 - - - - - - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
25. BRCC3 ENSDARG00000098242 1123 1.622 - 0.847 - - - 0.775 - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
26. pleca ENSDARG00000062590 16794 1.607 - - - 0.737 - 0.870 - - - plectin a [Source:ZFIN;Acc:ZDB-GENE-030131-8984]
27. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 1.595 - 0.895 - - - - - - 0.700 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
28. hnrpdl 14288 1.592 - 0.846 - - - 0.746 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
29. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 1.575 - 0.868 - - - - - - 0.707 PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
30. rtn2a ENSDARG00000016088 12184 1.525 0.777 - - - - - - - 0.748 reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
31. vdac3 ENSDARG00000003695 16776 1.522 0.741 - 0.781 - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
32. atp5g1 51897 1.521 0.793 0.728 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
33. ndufs5 ENSDARG00000006290 15918 1.52 0.751 - 0.769 - - - - - - NADH:ubiquinone oxidoreductase subunit S5 [Source:ZFIN;Acc:ZDB-GENE-050522-437]
34. klhl41a ENSDARG00000068888 1034 1.515 0.732 - - - - 0.783 - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
35. murcb murcb 13655 1.51 0.763 - 0.747 - - - - - -
36. ctsf ENSDARG00000063095 4564 1.506 - - 0.735 - - 0.771 - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
37. plagx ENSDARG00000036855 3768 1.504 0.724 - - - - 0.780 - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
38. ube2v2 ENSDARG00000028198 23341 1.504 0.750 - - - - - - - 0.754 ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
39. ATP5B 76711 1.498 0.797 - 0.701 - - - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
40. cct5 ENSDARG00000045399 11572 1.497 0.785 - 0.712 - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
41. pes ENSDARG00000018902 3286 1.495 0.716 - - - - 0.779 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
42. sec63 ENSDARG00000017740 3789 1.494 - - - - - 0.778 - - 0.716 SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
43. flot2b ENSDARG00000069774 2831 1.485 - - - - - 0.767 - - 0.718 flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
44. amotl2a ENSDARG00000061923 4713 1.48 - - - - - 0.745 - - 0.735 angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
45. qkia ENSDARG00000097478 18572 1.477 0.763 - - 0.714 - - - - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
46. rab5c ENSDARG00000026712 4733 1.464 - 0.754 - - - - - - 0.710 RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
47. cox6a1 ENSDARG00000022438 18811 1.446 0.704 - 0.742 - - - - - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
48. TRIM63 TRIM63 1600 1.436 0.723 - - 0.713 - - - - -
49. amd1 ENSDARG00000043856, ENSDARG00000111778 9667 1.432 - - 0.716 - - 0.716 - - - adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
50. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 1.43 0.705 0.725 - - - - - - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
51. phb ENSDARG00000057414 9551 1.419 0.701 - - - - 0.718 - - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
52. fabp3 ENSDARG00000023290 98860 1.414 0.704 - - - - - 0.710 - - fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
53. znf827 ENSDARG00000076171 6304 0.983 - - - - - - 0.983 - - zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
54. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 0.957 - 0.957 - - - - - - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
55. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 0.956 - 0.956 - - - - - - - histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
56. si:ch211-156j16.1 ENSDARG00000092035 7441 0.953 - 0.953 - - - - - - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
57. HRC ENSDARG00000045947 10287 0.946 - - - - - - 0.946 - - histidine rich calcium binding protein [Source:ZFIN;Acc:ZDB-GENE-041008-189]
58. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 0.943 - 0.943 - - - - - - - translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
59. ppm1bb ENSDARG00000011496 10196 0.939 - - - - - - 0.939 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-185]
60. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 0.937 - 0.937 - - - - - - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
61. ndufs3 ENSDARG00000015385 7790 0.936 - - - - - - 0.936 - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
62. anxa11a ENSDARG00000077383 4076 0.933 - - - - - - 0.933 - - annexin A11a [Source:ZFIN;Acc:ZDB-GENE-030707-4]
63. dpy30 ENSDARG00000004427 7112 0.933 - - - - - - 0.933 - - dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
64. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 0.933 - - - - - - 0.933 - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
65. slc38a4 ENSDARG00000018149 2344 0.933 - - - - - - 0.933 - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
66. dtna ENSDARG00000031015 1746 0.933 - - - - - - 0.933 - - dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
67. her6 ENSDARG00000006514, ENSDARG00000111099 7477 0.933 - - - - - - 0.933 - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
68. ndufs1 ENSDARG00000028546 5795 0.933 - 0.933 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
69. dap3 ENSDARG00000078500 2724 0.932 - - - - - - 0.932 - - death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
70. TMEM255A ENSDARG00000073911 924 0.932 - - - - - - 0.932 - - transmembrane protein 255A [Source:ZFIN;Acc:ZDB-GENE-070412-2]
71. map2k4b ENSDARG00000077177 1869 0.932 - - - - - - 0.932 - - mitogen-activated protein kinase kinase 4b [Source:ZFIN;Acc:ZDB-GENE-080721-13]
72. ACVR2B 6615 0.932 - - - - - - 0.932 - - activin A receptor, type IIB
73. atp5mf ENSDARG00000037867 11052 0.932 - - - - - - 0.932 - - ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
74. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 0.932 - - - - - - 0.932 - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
75. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 0.932 - - - - - - 0.932 - - proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
76. LRIG3 ENSDARG00000079363 909 0.932 - - - - - - 0.932 - - leucine-rich repeats and immunoglobulin-like domains 3 [Source:ZFIN;Acc:ZDB-GENE-130530-866]
77. HECW1 HECW1 1531 0.932 - - - - - - 0.932 - -
78. spred2a ENSDARG00000052435 1624 0.932 - - - - - - 0.932 - - sprouty-related, EVH1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-110830-2]
79. rap2c ENSDARG00000015649 4709 0.932 - 0.932 - - - - - - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
80. rbm14b ENSDARG00000103834 1597 0.931 - - - - - - 0.931 - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
81. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 0.931 - - - - - - 0.931 - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
82. LURAP1 ENSDARG00000044406, ENSDARG00000115301 938 0.931 - - - - - - 0.931 - - leucine rich adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-35]
83. BOLA2B BOLA2B 2957 0.931 - - - - - - 0.931 - -
84. G3BP2 ENSDARG00000014790 9380 0.931 - - - - - - 0.931 - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
85. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 0.931 - - - - - - 0.931 - - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
86. smcr7a smcr7a 1356 0.931 - - - - - - 0.931 - -
87. atp1a3a ENSDARG00000018259 5393 0.931 - - - - - - 0.931 - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
88. MAF1 ENSDARG00000013122 6899 0.931 - - - - - - 0.931 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
89. dhps ENSDARG00000003270 827 0.931 - - - - - - 0.931 - - deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
90. shroom1 ENSDARG00000094181 2325 0.931 - - - - - - 0.931 - - shroom family member 1 [Source:ZFIN;Acc:ZDB-GENE-091204-385]
91. dcaf17 ENSDARG00000074909 913 0.931 - - - - - - 0.931 - - ddb1 and cul4 associated factor 17 [Source:ZFIN;Acc:ZDB-GENE-071008-1]
92. dlb ENSDARG00000004232 5120 0.931 - - - - - - 0.931 - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
93. med1 ENSDARG00000075340 2421 0.931 - - - - - - 0.931 - - mediator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081104-257]
94. mapk14b ENSDARG00000028721 1486 0.931 - - - - - - 0.931 - - mitogen-activated protein kinase 14b [Source:ZFIN;Acc:ZDB-GENE-021007-1]
95. znf740 znf740 2458 0.931 - - - - - - 0.931 - -
96. cebpg ENSDARG00000036073 3791 0.931 - - - - - - 0.931 - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
97. btbd3a ENSDARG00000005544 595 0.931 - - - - - - 0.931 - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
98. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 0.931 - - - - - - 0.931 - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
99. gid8b ENSDARG00000037589 2121 0.931 - - - - - - 0.931 - - GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
100. kiaa0907 1674 0.931 - - - - - - 0.931 - - KIAA0907 protein, transcript variant X7

There are 724 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA