Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col18a1

Gene Name Gene ID Reads Annotation
col18a1 col18a1 20555










Genes with expression patterns similar to col18a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col18a1 col18a1 20555 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CABZ01007794.1 CABZ01007794.1 14290 2.567 - - - - 0.737 0.924 0.906 - -
3. cldni ENSDARG00000054616, ENSDARG00000111133 16328 2.524 - - - - 0.870 - 0.891 - 0.763 claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
4. gstt1a ENSDARG00000042428, ENSDARG00000110738 3098 2.323 0.709 - - - - 0.774 0.840 - - glutathione S-transferase theta 1a [Source:ZFIN;Acc:ZDB-GENE-031001-13]
5. elovl7b ENSDARG00000100185 2032 2.296 0.718 - - - - 0.710 0.868 - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
6. arhgdig ENSDARG00000004034 10368 2.274 - - - - - 0.828 0.728 - 0.718 Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
7. ywhabb ENSDARG00000075758 23104 1.874 - - - 0.950 - - 0.924 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
8. serbp1a ENSDARG00000074242 10818 1.826 - - 0.855 0.971 - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
9. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.803 - - - - - 0.914 0.889 - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
10. rhoae rhoae 4047 1.782 - - - 0.968 - - 0.814 - -
11. prpf40a ENSDARG00000058467 6565 1.756 - - 0.788 0.968 - - - - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
12. fahd2a ENSDARG00000103759 9581 1.749 - - - 0.943 - - 0.806 - - fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
13. mvp ENSDARG00000021242 6875 1.738 - - - - - 0.875 0.863 - - major vault protein [Source:ZFIN;Acc:ZDB-GENE-030826-33]
14. zgc:56493 ENSDARG00000031435 33407 1.737 - - - 0.957 - - 0.780 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
15. sepw1 17630 1.7 - - - - - 0.801 0.899 - - selenoprotein W, 1
16. blcap ENSDARG00000052073 8646 1.695 - - 0.723 0.972 - - - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
17. abracl ENSDARG00000042876 10208 1.693 - - - - - 0.912 0.781 - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
18. sri ENSDARG00000058593 13152 1.692 - - 0.902 - - - - 0.790 - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
19. rps29 ENSDARG00000041232 71334 1.69 - - 0.806 0.884 - - - - - ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
20. pls3 ENSDARG00000037655 5175 1.688 0.785 - - - - - 0.903 - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
21. bcam ENSDARG00000090190 39912 1.686 - - - - - 0.771 0.915 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
22. myom1a ENSDARG00000061249 10230 1.676 - - - 0.964 0.712 - - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
23. rcan1a ENSDARG00000003109, ENSDARG00000112478 3319 1.674 - - - - - 0.813 0.861 - - regulator of calcineurin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-135]
24. slc4a2b ENSDARG00000052330 1900 1.673 - - 0.894 - 0.779 - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
25. ywhaz ENSDARG00000032575 15257 1.672 - - - 0.798 - - 0.874 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
26. CNDP1 CNDP1 6456 1.67 - - - 0.966 - - 0.704 - -
27. msxc msxc 3142 1.66 - - 0.901 - - - 0.759 - -
28. SERP1_1 ENSDARG00000076223 6668 1.642 - - - - - 0.774 0.868 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
29. arhgdia ENSDARG00000043795 14642 1.641 - - - - 0.797 - 0.844 - - Rho GDP dissociation inhibitor (GDI) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2816]
30. and2 ENSDARG00000079302 20939 1.637 - - - - - - 0.907 0.730 - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
31. KRT78 KRT78 10751 1.635 - - - - - 0.727 0.908 - -
32. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.624 - - - - - - 0.865 - 0.759 transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
33. cldne ENSDARG00000043128 6960 1.623 - - - - - - 0.914 - 0.709 claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
34. krt4 ENSDARG00000017624, ENSDARG00000115790 2008869 1.621 - - - - - - 0.839 0.782 - keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
35. aup1 ENSDARG00000092609 2431 1.619 - - 0.895 - - - 0.724 - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
36. si:ch211-157c3.4 ENSDARG00000087093 22736 1.616 - - - - - - 0.875 - 0.741 si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]
37. GPA33 2465 1.613 0.807 - - - 0.806 - - - - glycoprotein A33 (transmembrane)
38. capn2b ENSDARG00000055592 5431 1.612 - - - - - 0.785 0.827 - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
39. etfb ENSDARG00000009250 13036 1.608 - - - - - 0.840 0.768 - - electron transfer flavoprotein subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-1931]
40. arcn1a ENSDARG00000002792 2847 1.605 0.806 - - - - - 0.799 - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
41. krt17 ENSDARG00000094041 7683 1.603 - - 0.824 - - - 0.779 - - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
42. evpla ENSDARG00000019808 7565 1.6 - - - - 0.829 - 0.771 - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
43. gfpt2 ENSDARG00000044094 2503 1.599 - - - - - 0.716 0.883 - - glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
44. tspo ENSDARG00000026655 12517 1.597 0.700 - - - - 0.897 - - - translocator protein [Source:ZFIN;Acc:ZDB-GENE-041010-125]
45. tfap2c ENSDARG00000040606 4628 1.589 - - - - - - 0.846 - 0.743 transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
46. cideb ENSDARG00000012640 620 1.586 0.741 - - - - - 0.845 - - cell death-inducing DFFA-like effector b [Source:ZFIN;Acc:ZDB-GENE-080514-2]
47. coro1ca ENSDARG00000035598 9278 1.585 - - - - - 0.833 0.752 - - coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
48. sox9b ENSDARG00000043923 5375 1.582 - - 0.830 - 0.752 - - - - SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
49. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.576 - - 0.858 - 0.718 - - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
50. degs2 ENSDARG00000042544 1912 1.575 0.756 - - - - - 0.819 - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
51. stam2 ENSDARG00000005318 2980 1.571 - - - - 0.778 - 0.793 - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
52. and3 ENSDARG00000056873 22650 1.564 - - - - - - 0.833 0.731 - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
53. bach1 bach1 1121 1.563 0.772 - - - - - 0.791 - -
54. hmox1 hmox1 1391 1.563 0.775 - - - - - 0.788 - -
55. si:ch211-232i5.3 ENSDARG00000086874 1256 1.558 0.704 - - - - - 0.854 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
56. cwc25 ENSDARG00000003382 2134 1.558 0.742 - - - - - 0.816 - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
57. man1a1 ENSDARG00000005652 877 1.556 0.732 - - - - - 0.824 - - mannosidase, alpha, class 1A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041014-321]
58. capn9 ENSDARG00000012341 12911 1.552 - - - - 0.788 - 0.764 - - calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
59. zgc:171775 ENSDARG00000058381, ENSDARG00000114470 5760 1.547 - - - - - 0.789 0.758 - - zgc:171775 [Source:ZFIN;Acc:ZDB-GENE-030131-4309]
60. CLDN23 CLDN23 2002 1.547 - - - - - 0.724 0.823 - -
61. s100v1 ENSDARG00000070427 6633 1.543 - - - - 0.805 - 0.738 - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
62. OMG OMG 1202 1.54 0.771 - - - - - 0.769 - -
63. vps25 ENSDARG00000059079 3747 1.54 - - - - 0.784 - 0.756 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
64. galnt12 ENSDARG00000055490 1653 1.537 0.738 - - - - - 0.799 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
65. pabpc1a ENSDARG00000017219 95045 1.537 - - - 0.825 - - 0.712 - - poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
66. umps ENSDARG00000012215 4564 1.534 - - 0.777 - - - 0.757 - - uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
67. tspan7 ENSDARG00000015759 13891 1.533 - - 0.756 - - 0.777 - - - tetraspanin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5435]
68. and1 ENSDARG00000088514 37603 1.527 - - - - - - 0.790 0.737 - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
69. C1H4orf33 C1H4orf33 2097 1.527 0.743 - - - - - 0.784 - -
70. myo1eb ENSDARG00000009133, ENSDARG00000109491 2396 1.527 - - - - - 0.711 0.816 - - myosin IE, b [Source:ZFIN;Acc:ZDB-GENE-040426-1347]
71. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.526 0.771 - - - - - 0.755 - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
72. tm9sf4 ENSDARG00000002536 1684 1.523 - - - - 0.775 - 0.748 - - transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
73. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 1.519 0.786 - - - - 0.733 - - - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
74. grhprb ENSDARG00000019986, ENSDARG00000109547 3233 1.517 0.813 - - - - - 0.704 - - glyoxylate reductase/hydroxypyruvate reductase b [Source:ZFIN;Acc:ZDB-GENE-040426-1847]
75. sqstm1 ENSDARG00000075014 2392 1.516 0.740 - - - - - 0.776 - - sequestosome 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2204]
76. cyp2aa9 ENSDARG00000098890 839 1.513 0.748 - - - - - 0.765 - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
77. sec61a1 ENSDARG00000021669 20408 1.511 - - - - 0.790 - 0.721 - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
78. mapk1 ENSDARG00000027552, ENSDARG00000111915 1969 1.51 - - - - - 0.749 0.761 - - mitogen-activated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-2]
79. slc48a1b ENSDARG00000026109 1427 1.501 - - - - 0.760 - 0.741 - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
80. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.49 - - - - - - 0.759 - 0.731 Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
81. impad1 ENSDARG00000058114 667 1.488 0.741 - - - - - 0.747 - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
82. EPHA2 EPHA2 867 1.485 0.716 - - - - - 0.769 - -
83. mtpn ENSDARG00000104018 4264 1.483 - - - - - 0.740 0.743 - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
84. tet3 ENSDARG00000062646 6672 1.473 - - - - 0.766 - 0.707 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
85. trpc4apa ENSDARG00000018840 2543 1.472 - - - - 0.761 - 0.711 - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
86. bcar1 ENSDARG00000056525 6563 1.455 - - - - - - 0.736 - 0.719 BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
87. irf6 ENSDARG00000101986 1438 1.453 - - - - - 0.726 0.727 - - interferon regulatory factor 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1137]
88. larp6 1695 1.443 0.739 - - - - - 0.704 - - La ribonucleoprotein domain family, member 6
89. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.434 - - - - 0.709 - 0.725 - - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
90. agpat5 ENSDARG00000063187 1315 1.422 0.706 - - - - - 0.716 - - 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) [Source:ZFIN;Acc:ZDB-GENE-060929-914]
91. zgc:114045 ENSDARG00000069334, ENSDARG00000112063 991 1.416 0.713 - - - - - 0.703 - - zgc:114045 [Source:ZFIN;Acc:ZDB-GENE-050913-119]
92. pxn_1 pxn_1 3991 1.416 0.706 - - - - - - - 0.710
93. eif2s3 ENSDARG00000008292 17051 0.978 - - - 0.978 - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
94. ADAMTS3 ENSDARG00000060127 2839 0.976 - - - 0.976 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
95. txndc5 ENSDARG00000009342 5387 0.976 - - - 0.976 - - - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
96. alas1 ENSDARG00000021059 4892 0.973 - - - 0.973 - - - - - aminolevulinate, delta-, synthase 1 [Source:ZFIN;Acc:ZDB-GENE-001229-2]
97. mpi ENSDARG00000030786 3052 0.973 - - - 0.973 - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
98. acsl3b ENSDARG00000014674 3748 0.973 - - - 0.973 - - - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
99. fermt2 ENSDARG00000020242 9351 0.973 - - - 0.973 - - - - - fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
100. CU463857.1 CU463857.1 5541 0.973 - - - 0.973 - - - - -

There are 1131 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA