Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col17a1b

Gene Name Gene ID Reads Annotation
col17a1b ENSDARG00000079011 143 collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]










Genes with expression patterns similar to col17a1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col17a1b ENSDARG00000079011 143 7 1.000 - 1.000 1.000 - 1.000 1.000 1.000 1.000 collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
2. nr1d2b ENSDARG00000009594 1144 1.906 - - - - - 0.970 - 0.936 - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
3. spire2 ENSDARG00000003084 6 1.895 1.000 - 0.895 - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
4. smim8 ENSDARG00000071040 622 1.889 - - - - - 0.971 - 0.918 - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
5. dennd1b ENSDARG00000101868 328 1.82 - - - - - 0.954 - 0.866 - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
6. elp5 ENSDARG00000067918 541 1.796 - - - - - 0.923 - 0.873 - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
7. grk5 ENSDARG00000032801 490 1.749 - - - - - 0.892 - 0.857 - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
8. cops5 ENSDARG00000057624 1485 1.747 - - - - - 0.828 - 0.919 - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
9. mctp2a ENSDARG00000001414 307 1.727 - - - - - 0.945 - 0.782 - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
10. CU459084.1 CU459084.1 4 1.719 0.759 - 0.960 - - - - - -
11. tsen34 ENSDARG00000061370, ENSDARG00000115749 814 1.664 - - - - - 0.848 - 0.816 - TSEN34 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050419-115]
12. tuft1b ENSDARG00000071010 909 1.644 - - - - - 0.890 - 0.754 - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
13. rfx1b ENSDARG00000075904 1175 1.597 - - - - - 0.818 - 0.779 - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
14. eif4eb ENSDARG00000013274, ENSDARG00000114799 1262 1.589 - - - - - 0.840 - 0.749 - eukaryotic translation initiation factor 4eb [Source:ZFIN;Acc:ZDB-GENE-041121-14]
15. eif2b4 ENSDARG00000014004 2213 1.586 - - - - - 0.717 - 0.869 - eukaryotic translation initiation factor 2B, subunit 4 delta [Source:ZFIN;Acc:ZDB-GENE-030131-955]
16. coa5 ENSDARG00000094833 1988 1.58 - - - - - 0.878 - 0.702 - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
17. prep ENSDARG00000057151 3016 1.536 - - - - - 0.743 - 0.793 - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
18. zgc:91999 ENSDARG00000105001 129 1.498 0.780 - - - - - 0.718 - - zgc:91999 [Source:ZFIN;Acc:ZDB-GENE-040801-241]
19. fam46bb 601 1.471 0.751 - - - - - 0.720 - - family with sequence similarity 46, member Bb
20. pnx ENSDARG00000025899 25 1 1.000 - - - - - - - - posterior neuron-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-030328-42]
21. ATP13A5 ATP13A5 13 1 1.000 - - - - - - - -
22. RECK ENSDARG00000090039 15 1 1.000 - - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
23. PIK3CA ENSDARG00000075456 39 1 1.000 - - - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
24. CU896691.3 ENSDARG00000109630 1 1 1.000 - - - - - - - -
25. angptl1 angptl1 82 1 1.000 - - - - - - - -
26. si:dkey-187i8.2 ENSDARG00000096624 8 1 1.000 - - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
27. CCDC106_1 CCDC106_1 1 1 1.000 - - - - - - - -
28. CABZ01030429.1 CABZ01030429.1 1 1 1.000 - - - - - - - -
29. si:ch211-274k16.4 si:ch211-274k16.4 6 1 1.000 - - - - - - - -
30. GRID1 GRID1 51 1 1.000 - - - - - - - -
31. BX511066.4 BX511066.4 6 1 1.000 - - - - - - - -
32. GPC6_1 GPC6_1 34 1 1.000 - - - - - - - -
33. hbaa2 ENSDARG00000069735 10 1 1.000 - - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
34. glipr1b ENSDARG00000030078 73 1 1.000 - - - - - - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
35. calcr ENSDARG00000028845, ENSDARG00000109526 17 1 1.000 - - - - - - - - calcitonin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-420]
36. gbp3 ENSDARG00000003244 90 1 1.000 - - - - - - - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
37. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 1.000 - - - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
38. si:dkey-242e21.3 ENSDARG00000075723 77 1 1.000 - - - - - - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
39. si:dkey-47k16.4_1 ENSDARG00000113005 5 1 1.000 - - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
40. CR790388.1_1 ENSDARG00000078922 1 1 1.000 - - - - - - - -
41. zgc:113142 ENSDARG00000038969 74 1 1.000 - - - - - - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
42. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
43. CR751224.1 ENSDARG00000106298 8 1 1.000 - - - - - - - - kelch-like protein 12 [Source:NCBI gene;Acc:101884662]
44. CABZ01057940.1 CABZ01057940.1 4 1 1.000 - - - - - - - -
45. AC024175.11 AC024175.11 12 1 1.000 - - - - - - - -
46. BX005294.5 BX005294.5 5 1 1.000 - - - - - - - -
47. BX465205.1 ENSDARG00000097139 64 1 1.000 - - - - - - - -
48. abca4a ENSDARG00000057169 27 1 1.000 - - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
49. si:dkey-111e8.5 ENSDARG00000093960 28 1 1.000 - - - - - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
50. C5HXorf57 C5HXorf57 4 1 1.000 - - - - - - - -
51. DPYSL2 DPYSL2 4 1 1.000 - - - - - - - -
52. si:dkey-24l11.3 si:dkey-24l11.3 9 1 1.000 - - - - - - - -
53. ttr ENSDARG00000037191 11 1 1.000 - - - - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
54. cox5aa ENSDARG00000088383 21 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
55. doc2d ENSDARG00000079962 76 1 1.000 - - - - - - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
56. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 1.000 - - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
57. dnaaf2 ENSDARG00000103132 24 1 1.000 - - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
58. si:dkey-88j15.3 ENSDARG00000076573 1 1 1.000 - - - - - - - - si:dkey-88j15.3 [Source:ZFIN;Acc:ZDB-GENE-100922-28]
59. si:dkey-188k17.2 7 1 1.000 - - - - - - - - si:dkey-188k17.2
60. BX547934.1 ENSDARG00000097061 35 1 1.000 - - - - - - - -
61. FAT1 FAT1 689 1 1.000 - - - - - - - -
62. ankrd1b ENSDARG00000076192 204 1 1.000 - - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
63. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
64. si:ch73-27e22.5 si:ch73-27e22.5 10 1 1.000 - - - - - - - -
65. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 1.000 - - - - - - - -
66. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
67. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 1.000 - - - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
68. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1 1.000 - - - - - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
69. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
70. zgc:162962 ENSDARG00000116765 29 1 1.000 - - - - - - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
71. SCN1B SCN1B 191 1 1.000 - - - - - - - -
72. CABZ01033130.1 CABZ01033130.1 5 1 1.000 - - - - - - - -
73. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
74. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 1.000 - - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
75. SMARCAD1 SMARCAD1 104 1 1.000 - - - - - - - -
76. col17a1a ENSDARG00000069415 52 1 1.000 - - - - - - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
77. bon bon 20 1 1.000 - - - - - - - -
78. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
79. ak7b ENSDARG00000017023 25 1 1.000 - - - - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
80. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
81. si:ch211-196c10.11 si:ch211-196c10.11 2 1 1.000 - - - - - - - -
82. hmha1 hmha1 58 1 1.000 - - - - - - - -
83. CABZ01079015.1 CABZ01079015.1 10 1 1.000 - - - - - - - -
84. hsd11b2 ENSDARG00000001975 245 1 1.000 - - - - - - - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
85. si:ch211-114l13.3 ENSDARG00000094346 2 1 1.000 - - - - - - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
86. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 1.000 - - - - - - - -
87. CU463790.1 CU463790.1 60 1 1.000 - - - - - - - -
88. si:dkey-179a6.2 si:dkey-179a6.2 1 1 1.000 - - - - - - - -
89. si:dkey-206f10.5 si:dkey-206f10.5 1 1 1.000 - - - - - - - -
90. sostdc1a ENSDARG00000068892 127 1 1.000 - - - - - - - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
91. abcg4a ENSDARG00000061047 56 1 1.000 - - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
92. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
93. hepacam 73 1 1.000 - - - - - - - - hepatic and glial cell adhesion molecule, transcript variant X2
94. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1 1.000 - - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
95. iffo1a ENSDARG00000062976 5 1 1.000 - - - - - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
96. BX005106.1 BX005106.1 22 1 1.000 - - - - - - - -
97. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 1 1.000 - - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
98. si:ch73-223d24.4 si:ch73-223d24.4 5 1 1.000 - - - - - - - -
99. snoU13 snoU13 2 1 1.000 - - - - - - - -
100. PAMR1 ENSDARG00000093480 40 1 1.000 - - - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]

There are 1110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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