Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col17a1a

Gene Name Gene ID Reads Annotation
col17a1a ENSDARG00000069415 52 collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]










Genes with expression patterns similar to col17a1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col17a1a ENSDARG00000069415 52 6 1.000 - - 1.000 - 1.000 1.000 1.000 1.000 collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
2. ak7b ENSDARG00000017023 25 2 1.000 - - - - - 1.000 - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
3. si:ch211-196c10.11 si:ch211-196c10.11 2 2 1.000 - - 1.000 - - - - -
4. glipr1b ENSDARG00000030078 73 2 1.000 - - - - - 1.000 - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
5. si:ch211-202n12.5 si:ch211-202n12.5 19 1.992 - - - 0.992 - - 1.000 - -
6. CABZ01033130.1 CABZ01033130.1 5 1.986 1.000 - - 0.986 - - - - -
7. SLC7A8 SLC7A8 25 1.942 - - - 0.942 - - 1.000 - -
8. chmp6b ENSDARG00000102024 37 1.937 0.937 - - - - - 1.000 - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
9. CABZ01092943.1 CABZ01092943.1 29 1.937 0.978 - - - - - 0.959 - -
10. VDAC3 ENSDARG00000003695 34 1.893 - - - - - 0.893 1.000 - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
11. hsd11b2 ENSDARG00000001975 245 1.871 1.000 - - - - - 0.871 - - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
12. si:dkey-1h24.6 ENSDARG00000092653 13 1.768 - - - 0.768 - - 1.000 - - si:dkey-1h24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-103]
13. im:7136021 ENSDARG00000054128 79 1.767 - - - - - 0.860 0.907 - - im:7136021 [Source:ZFIN;Acc:ZDB-GENE-041008-74]
14. angptl1 angptl1 82 1.712 1.000 - - - - 0.712 - - -
15. rars2 ENSDARG00000032277 54 1.695 - - - - - 0.788 0.907 - - arginyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-1244]
16. TULP2 TULP2 38 1.681 - - - - - 0.876 0.805 - -
17. KBTBD3 ENSDARG00000060512 42 1.681 0.806 - - 0.875 - - - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
18. RPS11 ENSDARG00000053058 32 1.68 - - - 0.831 - 0.849 - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
19. qrsl1 ENSDARG00000032704 200 1.588 - - - - - 0.769 0.819 - - glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5540]
20. comta ENSDARG00000015337 93 1.581 - - - - - 0.838 0.743 - - catechol-O-methyltransferase a [Source:ZFIN;Acc:ZDB-GENE-050913-117]
21. rxrab ENSDARG00000035127 231 1.564 0.774 - - - - - 0.790 - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
22. KCNB2 ENSDARG00000088842 35 1.55 0.805 - - - - - 0.745 - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
23. dnajb13 ENSDARG00000043157 50 1.544 - - - 0.808 - - 0.736 - - DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
24. pigv ENSDARG00000101952 173 1.522 0.820 - - - - - - 0.702 - phosphatidylinositol glycan anchor biosynthesis, class V [Source:ZFIN;Acc:ZDB-GENE-121116-1]
25. si:dkey-148e3.2 si:dkey-148e3.2 117 1.517 0.772 - - - - - 0.745 - -
26. si:ch211-210h11.7 si:ch211-210h11.7 32 1.465 - - - - - - 0.720 0.745 -
27. CABZ01054405.2 CABZ01054405.2 46 1 - - - - - - 1.000 - -
28. CR790369.2 CR790369.2 0 1 - - - - - - 1.000 - -
29. si:ch211-39n21.1 si:ch211-39n21.1 0 1 - - - - - - 1.000 - -
30. si:ch211-133l5.7 ENSDARG00000095633 3 1 - - - - - - 1.000 - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
31. stpg1 ENSDARG00000103765 19 1 - - - 1.000 - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
32. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - - 1.000 - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
33. ptger4a ENSDARG00000059236 13 1 - - - - - - 1.000 - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
34. si:dkey-58f10.13 ENSDARG00000095532 11 1 - - - - - - 1.000 - - si:dkey-58f10.13 [Source:ZFIN;Acc:ZDB-GENE-060526-315]
35. fabp10a ENSDARG00000038439 4 1 - - - - - - 1.000 - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
36. UNC119 UNC119 104 1 - - - - - - 1.000 - -
37. zgc:194659 ENSDARG00000079347 17 1 - - - - - - 1.000 - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
38. GSC2 GSC2 3 1 - - - - - - 1.000 - -
39. CT030712.1 ENSDARG00000044355 83 1 - - - - - - 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
40. si:ch211-235f1.3 ENSDARG00000095179 27 1 - - - - - - 1.000 - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
41. sync ENSDARG00000035944 8 1 - - - - - - 1.000 - - syncoilin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-060503-747]
42. BX470200.1 BX470200.1 1 1 - - - - - - 1.000 - -
43. flt3 ENSDARG00000058503 32 1 - - - - - - 1.000 - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
44. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - - - 1.000 - -
45. snoU13 snoU13 2 1 1.000 - - - - - - - -
46. tti2 ENSDARG00000073773 19 1 - - - - - - 1.000 - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
47. ENSDARG00000089100 ENSDARG00000089100 5 1 - - - - - - 1.000 - -
48. si:dkey-28d5.2 si:dkey-28d5.2 2 1 - - - - - - 1.000 - -
49. col17a1b ENSDARG00000079011 143 1 1.000 - - - - - - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
50. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - - - - - 1.000 - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
51. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 1.000 - - - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
52. FOXO6_1 FOXO6_1 73 1 - - - - - - 1.000 - -
53. ENSDARG00000029117 ENSDARG00000029117 80 1 - - - - - - 1.000 - -
54. si:dkey-111e8.5 ENSDARG00000093960 28 1 1.000 - - - - - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
55. TULP1 TULP1 50 1 - - - - - - 1.000 - -
56. si:busm1-163l24.3 31 1 1.000 - - - - - - - - si:busm1-163l24.3
57. RNF122 RNF122 29 1 - - - - - - 1.000 - -
58. ELFN2 ELFN2 7 1 - - - - - - 1.000 - -
59. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
60. si:dkey-30j10.5 ENSDARG00000093186 13 1 - - - - - - 1.000 - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
61. bckdhb ENSDARG00000014676 17 1 - - - - - - 1.000 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
62. def8 ENSDARG00000068208 50 1 - - - - - - 1.000 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
63. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
64. irf10 ENSDARG00000027658 7 1 - - - - - - 1.000 - - interferon regulatory factor 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2084]
65. gcnt4b ENSDARG00000077550 2 1 - - - - - - 1.000 - - glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69]
66. ttr ENSDARG00000037191 11 1 1.000 - - - - - - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
67. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 - - - - - - 1.000 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
68. CABZ01076234.1 CABZ01076234.1 49 1 - - - - - - 1.000 - -
69. zgc:173577 ENSDARG00000098923 71 1 - - - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
70. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -
71. ccdc85a ENSDARG00000039497 24 1 - - - - - - 1.000 - - coiled-coil domain containing 85A [Source:ZFIN;Acc:ZDB-GENE-080220-55]
72. zgc:113142 ENSDARG00000038969 74 1 1.000 - - - - - - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
73. CU855899.1 CU855899.1 2 1 - - - 1.000 - - - - -
74. si:dkey-114e9.1 si:dkey-114e9.1 233 1 - - - - - - 1.000 - -
75. tmprss13b ENSDARG00000077573 47 1 - - - - - - 1.000 - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
76. si:ch211-220i18.4 ENSDARG00000030262 10 1 - - - - - - 1.000 - - si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]
77. pls1 ENSDARG00000039272 39 1 - - - - - - 1.000 - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
78. star ENSDARG00000006137 149 1 - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
79. zmat4b ENSDARG00000061419 7 1 - - - - - - 1.000 - - zinc finger, matrin-type 4b [Source:ZFIN;Acc:ZDB-GENE-091118-68]
80. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1 1.000 - - - - - - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
81. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
82. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - - 1.000 - -
83. si:dkey-16p6.1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 0 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
84. si:dkey-179a6.2 si:dkey-179a6.2 1 1 1.000 - - - - - - - -
85. grn1 ENSDARG00000089362 20 1 - - - - - - 1.000 - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
86. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - 1.000 - -
87. si:ch73-44m9.2 ENSDARG00000094821 101 1 - - - - - - 1.000 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
88. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - - 1.000 - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
89. zgc:136461 ENSDARG00000093844, ENSDARG00000114728 1 1 - - - - - - 1.000 - - zgc:136461 [Source:ZFIN;Acc:ZDB-GENE-060519-7]
90. RBBP6_2 RBBP6_2 23 1 - - - - - - 1.000 - -
91. cep68 ENSDARG00000039411 30 1 - - - - - - 1.000 - - centrosomal protein 68 [Source:ZFIN;Acc:ZDB-GENE-030616-565]
92. HEPACAM ENSDARG00000112032 1 1 - - - - - - 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
93. Telomerase-vert Telomerase-vert 8 1 - - - - - - 1.000 - -
94. RBBP6_9 RBBP6_9 1 1 - - - - - - 1.000 - -
95. nceh1a ENSDARG00000020427 35 1 - - - - - - 1.000 - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
96. lyve1b ENSDARG00000062483 14 1 - - - - - - 1.000 - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
97. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
98. si:dkey-106l3.7 ENSDARG00000093444 29 1 1.000 - - - - - - - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
99. BX511266.1 BX511266.1 21 1 - - - - - - 1.000 - -
100. si:dkey-206f10.5 si:dkey-206f10.5 1 1 1.000 - - - - - - - -

There are 894 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA