Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for col15a1b

Gene Name Gene ID Reads Annotation
col15a1b ENSDARG00000061848 398 collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]










Genes with expression patterns similar to col15a1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col15a1b ENSDARG00000061848 398 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
2. r3hdml ENSDARG00000030650 133 1.593 - 0.831 - - - 0.762 - - - R3H domain containing-like [Source:ZFIN;Acc:ZDB-GENE-090313-275]
3. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.593 - 0.852 - - - - 0.741 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
4. RBPMS ENSDARG00000099396 61 1.58 - 0.748 - - 0.832 - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
5. bicc2 ENSDARG00000076557 77 1.58 0.832 0.748 - - - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
6. STRIP2 ENSDARG00000059003 394 1.579 - 0.714 - - - 0.865 - - - striatin interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120328-1]
7. diexf 520 1.577 - - - 0.784 0.793 - - - - digestive organ expansion factor homolog
8. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 1.576 - 0.770 - - - - 0.806 - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
9. lft2 ENSDARG00000044059 46 1.57 - - - - 0.815 - - 0.755 - lefty2 [Source:ZFIN;Acc:ZDB-GENE-990630-11]
10. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.551 - 0.762 - - - 0.789 - - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
11. ADAMTS3 ENSDARG00000060127 2839 1.55 0.847 0.703 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
12. TIMM21 ENSDARG00000071594 722 1.539 - 0.769 - - - 0.770 - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
13. C3H19orf52 C3H19orf52 541 1.531 - 0.741 - 0.790 - - - - -
14. bag3 ENSDARG00000039486 1087 1.524 - 0.769 - - - - 0.755 - - BCL2 associated athanogene 3 [Source:ZFIN;Acc:ZDB-GENE-040801-40]
15. crispld1b ENSDARG00000013293 200 1.524 - 0.801 - - - 0.723 - - - cysteine-rich secretory protein LCCL domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1204]
16. pitx3 ENSDARG00000070069 363 1.516 0.790 0.726 - - - - - - - paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
17. nkx6.1 ENSDARG00000022569 3779 1.508 0.745 0.763 - - - - - - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
18. CU302436.1 ENSDARG00000114500 1619 1.503 0.716 0.787 - - - - - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
19. bcl7a ENSDARG00000052907, ENSDARG00000111533 962 1.502 - - - - - - 0.792 - 0.710 BCL tumor suppressor 7A [Source:ZFIN;Acc:ZDB-GENE-000607-16]
20. si:ch211-110p13.9 ENSDARG00000093821 82 1.501 - - - 0.720 0.781 - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
21. CABZ01079764.1 CABZ01079764.1 12103 1.5 - 0.734 - - - 0.766 - - -
22. cyp26b1 ENSDARG00000077121 1364 1.499 - - - - - - 0.734 0.765 - cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
23. lgals2a ENSDARG00000054942 888 1.496 0.747 - - - - - 0.749 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
24. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 1.49 - 0.772 - - - - 0.718 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
25. BX294434.1 ENSDARG00000061272 6493 1.471 - 0.770 - - - - 0.701 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
26. abhd15a ENSDARG00000078768 409 1.466 0.729 - - - - 0.737 - - - abhydrolase domain containing 15a [Source:ZFIN;Acc:ZDB-GENE-131121-270]
27. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.463 0.724 - - - - 0.739 - - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
28. chad ENSDARG00000045071 903 1.457 0.749 - - - - 0.708 - - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
29. bnip3 ENSDARG00000099961 78 1.449 - 0.741 - - - - 0.708 - - BCL2 interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8060]
30. bco2b ENSDARG00000041715 13 1.447 0.741 0.706 - - - - - - - beta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
31. NRAP ENSDARG00000009341 3565 1.442 - 0.722 - - - - 0.720 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
32. rp42-pen rp42-pen 3395 1.427 - 0.722 - - - - 0.705 - -
33. urp2 ENSDARG00000067781 85 1.422 0.715 0.707 - - - - - - - urotensin II-related peptide [Source:ZFIN;Acc:ZDB-GENE-110718-3]
34. fam89b ENSDARG00000069106 294 0.946 - 0.946 - - - - - - - family with sequence similarity 89, member B [Source:ZFIN;Acc:ZDB-GENE-091204-269]
35. si:ch211-255g12.7 si:ch211-255g12.7 44 0.945 - 0.945 - - - - - - -
36. GJD2 GJD2 1351 0.921 - 0.921 - - - - - - -
37. clu ENSDARG00000010434 498 0.918 0.918 - - - - - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
38. wu:fc28f08 wu:fc28f08 188 0.913 - - - - 0.913 - - - -
39. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 0.908 - - - 0.908 - - - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
40. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 0.903 0.903 - - - - - - - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
41. dclk2 dclk2 719 0.902 - - - 0.902 - - - - -
42. pax3a ENSDARG00000010192 626 0.902 - 0.902 - - - - - - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
43. efcab2 ENSDARG00000074323 88 0.898 0.898 - - - - - - - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
44. GTPBP8 ENSDARG00000075033 231 0.887 - 0.887 - - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
45. cacna1sb ENSDARG00000042552 1320 0.887 - - - - - - 0.887 - - calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
46. PRIMA1 PRIMA1 459 0.884 0.884 - - - - - - - -
47. si:dkey-187a12.4 127 0.883 - 0.883 - - - - - - - si:dkey-187a12.4
48. ispd ENSDARG00000005034 173 0.882 - - - - - - 0.882 - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
49. MSMP ENSDARG00000105581 254 0.879 0.879 - - - - - - - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
50. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.875 0.875 - - - - - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
51. zgc:55764 zgc:55764 645 0.875 - - - 0.875 - - - - -
52. cdkl1 ENSDARG00000017329 3345 0.875 0.875 - - - - - - - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
53. nrd1 nrd1 324 0.875 - - - - - 0.875 - - -
54. lgi1a ENSDARG00000020493 1218 0.874 - 0.874 - - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
55. nkx2.2a ENSDARG00000053298 747 0.872 0.872 - - - - - - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
56. six4a ENSDARG00000004695 413 0.867 - 0.867 - - - - - - - SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]
57. CU855895.3 CU855895.3 21 0.867 - - - - - - 0.867 - -
58. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 0.867 0.867 - - - - - - - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
59. eml1 ENSDARG00000042840 569 0.867 - 0.867 - - - - - - - echinoderm microtubule associated protein like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]
60. wasb ENSDARG00000026350 139 0.866 0.866 - - - - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
61. si:dkey-5i3.5 ENSDARG00000058345, ENSDARG00000110584 60 0.865 - - - - - - 0.865 - - si:dkey-5i3.5 [Source:ZFIN;Acc:ZDB-GENE-070424-162]
62. wnt2ba ENSDARG00000005050 11 0.865 - - - - - - 0.865 - - wingless-type MMTV integration site family, member 2Ba [Source:ZFIN;Acc:ZDB-GENE-030717-2]
63. abcc6a ENSDARG00000016750 10 0.865 - - - - - - 0.865 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
64. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 0.863 - - - 0.863 - - - - - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
65. si:ch211-101n13.1 si:ch211-101n13.1 68 0.861 - - - - - - 0.861 - -
66. zgc:110224 ENSDARG00000032263 147 0.861 - - - 0.861 - - - - - zgc:110224 [Source:ZFIN;Acc:ZDB-GENE-050417-120]
67. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 0.858 - - - - - - 0.858 - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
68. mylk2 ENSDARG00000031698 135 0.858 - 0.858 - - - - - - - myosin light chain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080616-2]
69. SENP2 ENSDARG00000073837 1411 0.857 - - - - 0.857 - - - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
70. zgc:174268 ENSDARG00000076807 250 0.856 - - - - - 0.856 - - - zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
71. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 0.855 0.855 - - - - - - - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
72. neflb ENSDARG00000012426 298 0.855 0.855 - - - - - - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
73. lrrcc1 ENSDARG00000078535 118 0.855 0.855 - - - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
74. entpd2a.1 ENSDARG00000035506 14 0.855 0.855 - - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-187]
75. MAP3K2 ENSDARG00000062884 34 0.855 0.855 - - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
76. si:ch211-250m6.8 si:ch211-250m6.8 51 0.855 0.855 - - - - - - - -
77. mvd mvd 105 0.855 0.855 - - - - - - - -
78. Metazoa_SRP_30 Metazoa_SRP_30 10 0.855 0.855 - - - - - - - -
79. RP1L1_1 RP1L1_1 11 0.855 0.855 - - - - - - - -
80. si:ch73-389b16.2 ENSDARG00000103802 340 0.855 0.855 - - - - - - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
81. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 0.855 0.855 - - - - - - - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
82. slitrk3b ENSDARG00000074739 19 0.855 0.855 - - - - - - - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
83. si:dkey-188i13.10 ENSDARG00000075151 22 0.855 0.855 - - - - - - - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
84. rnf144ab ENSDARG00000042557 136 0.855 0.855 - - - - - - - - ring finger protein 144ab [Source:ZFIN;Acc:ZDB-GENE-040718-486]
85. PDXP ENSDARG00000109823 195 0.855 0.855 - - - - - - - - pyridoxal (pyridoxine, vitamin B6) phosphatase [Source:ZFIN;Acc:ZDB-GENE-080723-69]
86. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 0.855 0.855 - - - - - - - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
87. cyp27a1.4 ENSDARG00000055159 47 0.855 0.855 - - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
88. ZNF423 ENSDARG00000059707 11 0.855 0.855 - - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
89. BX322657.1 ENSDARG00000102448 23 0.855 0.855 - - - - - - - -
90. SUSD3 SUSD3 64 0.854 - - - - 0.854 - - - -
91. enpp5 ENSDARG00000070625 550 0.853 - 0.853 - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-041014-10]
92. exd2 ENSDARG00000016117 342 0.853 - 0.853 - - - - - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
93. senp3b ENSDARG00000056741 1296 0.852 - - - - 0.852 - - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
94. BX323459.1 ENSDARG00000109508 1476 0.85 0.850 - - - - - - - -
95. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 0.85 - 0.850 - - - - - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
96. tspan12 ENSDARG00000032389 419 0.85 - - - - - - 0.850 - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
97. gulp1b ENSDARG00000057833 382 0.848 - - - 0.848 - - - - - GULP, engulfment adaptor PTB domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-120228-2]
98. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 0.848 - 0.848 - - - - - - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
99. leng1 ENSDARG00000037633 351 0.848 - 0.848 - - - - - - - leukocyte receptor cluster (LRC) member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-159]
100. pdlim7 ENSDARG00000103854 465 0.847 - - - - - - 0.847 - - PDZ and LIM domain 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2092]

There are 983 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA