Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col12a1a

Gene Name Gene ID Reads Annotation
col12a1a ENSDARG00000078322 1833 collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]










Genes with expression patterns similar to col12a1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col12a1a ENSDARG00000078322 1833 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
2. si:dkey-52k20.13 si:dkey-52k20.13 428 2.393 - 0.949 - - - 0.743 0.701 - -
3. itga5 ENSDARG00000006353 1876 2.389 - 0.759 - - - 0.787 0.843 - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
4. cpvl ENSDARG00000056480 2115 2.36 - - - - - 0.858 0.743 - 0.759 carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
5. yipf2 ENSDARG00000021399 702 2.338 - 0.724 - - - 0.783 - - 0.831 Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
6. slc30a8 ENSDARG00000100917 761 2.332 - 0.707 - - - 0.825 0.800 - - solute carrier family 30 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060315-10]
7. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 2.247 - - - - - 0.716 0.711 - 0.820 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
8. BX005001.1 BX005001.1 741 2.239 0.787 - - - - 0.717 0.735 - -
9. gramd1a ENSDARG00000076689 1148 1.733 - 0.921 - - - 0.812 - - - GRAM domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060503-688]
10. FBXL3 FBXL3 1769 1.729 - 0.909 - - - - - - 0.820
11. slc25a36a ENSDARG00000038731, ENSDARG00000111673 2008 1.71 - - - - - 0.891 - - 0.819 solute carrier family 25 (pyrimidine nucleotide carrier ), member 36a [Source:ZFIN;Acc:ZDB-GENE-040718-415]
12. miox ENSDARG00000002764 588 1.709 - 0.921 - - - 0.788 - - - myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
13. dio3b ENSDARG00000095767 521 1.709 - - - - - 0.838 0.871 - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
14. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 1.707 - 0.949 - - - 0.758 - - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
15. cdh6 ENSDARG00000014522 5492 1.702 - - - - - 0.873 0.829 - - cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]
16. ssh2a ENSDARG00000088440 1149 1.699 - 0.901 - - - - - - 0.798 slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
17. elmod2 ENSDARG00000101669 3101 1.676 - 0.871 - - - - 0.805 - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
18. cfhl2 ENSDARG00000103760, ENSDARG00000110252 579 1.676 - - - - - 0.851 0.825 - - complement factor H like 2 [Source:ZFIN;Acc:ZDB-GENE-041114-123]
19. prdx4 ENSDARG00000069013 1150 1.673 - 0.906 - - - - - - 0.767 peroxiredoxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1096]
20. mogat3b ENSDARG00000003635 394 1.666 - 0.895 - - - - 0.771 - - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
21. suclg2 ENSDARG00000044914 7950 1.655 - - - - - 0.865 0.790 - - succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
22. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.652 - - - - - - 0.829 - 0.823 ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
23. arpc5b ENSDARG00000019062 2786 1.647 - 0.802 - - - 0.845 - - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
24. zgc:158309 zgc:158309 2696 1.647 - - - - - 0.791 0.856 - -
25. acaa1 ENSDARG00000004687 557 1.647 - 0.944 - - - - 0.703 - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
26. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.646 - - - - - 0.771 0.875 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
27. rnf121 ENSDARG00000060282 1809 1.646 - - - - - 0.805 - - 0.841 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
28. arntl1a ENSDARG00000006791 550 1.643 - 0.858 - - - 0.785 - - - aryl hydrocarbon receptor nuclear translocator-like 1a [Source:ZFIN;Acc:ZDB-GENE-000509-1]
29. zgc:173548 ENSDARG00000070048 558 1.642 - 0.864 - - - - - - 0.778 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
30. prpf4ba ENSDARG00000008784 936 1.628 - 0.844 - - - - - - 0.784 pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
31. anxa5b ENSDARG00000016470 2934 1.628 - - - - - - 0.800 - 0.828 annexin A5b [Source:ZFIN;Acc:ZDB-GENE-030131-9076]
32. cica ENSDARG00000071150 633 1.621 0.822 - - - - 0.799 - - - capicua transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-060503-700]
33. rock2a ENSDARG00000017500 1277 1.62 - 0.768 - - - - 0.852 - - rho-associated, coiled-coil containing protein kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030115-3]
34. ttc19 ENSDARG00000074435 249 1.615 - 0.879 - - 0.736 - - - - tetratricopeptide repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-070912-490]
35. emilin1b ENSDARG00000026166 1530 1.612 - - - - - 0.773 0.839 - - elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
36. raraa ENSDARG00000056783 1404 1.611 - 0.780 - - - - 0.831 - - retinoic acid receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-980526-284]
37. si:dkey-61l1.4 ENSDARG00000092567 1012 1.607 - 0.903 - - - - 0.704 - - si:dkey-61l1.4 [Source:ZFIN;Acc:ZDB-GENE-070705-483]
38. rbm45 ENSDARG00000063731 504 1.606 - 0.783 - - - - - - 0.823 RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]
39. sod1 ENSDARG00000043848 1514 1.606 - 0.892 - - - 0.714 - - - superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]
40. CFP ENSDARG00000094451 852 1.605 - - - - - 0.861 - - 0.744 complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
41. araf ENSDARG00000054533 1132 1.605 - 0.814 - - - - - - 0.791 A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
42. si:ch211-127i16.2 ENSDARG00000092976, ENSDARG00000116049 152 1.603 - 0.808 - - 0.795 - - - - si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54]
43. MIIP ENSDARG00000088346 382 1.602 - 0.874 - - - - 0.728 - - migration and invasion inhibitory protein [Source:ZFIN;Acc:ZDB-GENE-130620-1]
44. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 1.601 - - - - - 0.742 0.859 - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
45. nadkb ENSDARG00000060362 957 1.6 - 0.730 - - - 0.870 - - - NAD kinase b [Source:ZFIN;Acc:ZDB-GENE-061103-433]
46. FP085386.1 FP085386.1 229 1.598 - 0.890 - - - - 0.708 - -
47. wu:fa03e10 2390 1.59 - - - - - 0.826 0.764 - - wu:fa03e10
48. CR318593.1 CR318593.1 290 1.589 0.700 0.889 - - - - - - -
49. BX004812.1 ENSDARG00000096968 5467 1.589 - - - - - 0.881 0.708 - -
50. zgc:56585 ENSDARG00000026236 704 1.588 - 0.857 - - - - 0.731 - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
51. nhej1 ENSDARG00000058893 172 1.588 0.761 0.827 - - - - - - - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
52. pck1 ENSDARG00000013522 1657 1.587 - - - - - 0.760 0.827 - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
53. adam17b ENSDARG00000093093 792 1.586 - - - - - - 0.744 - 0.842 ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
54. ikbkb ENSDARG00000079123 498 1.581 - 0.813 - - - - - - 0.768 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
55. hoga1 ENSDARG00000018944 800 1.58 - 0.854 - - - - 0.726 - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
56. mars ENSDARG00000034396 3618 1.58 - - - - - 0.799 - - 0.781 methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
57. foxi3a ENSDARG00000055926 749 1.576 - 0.844 - - - 0.732 - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
58. PPFIBP1_1 PPFIBP1_1 2256 1.575 - - - - - 0.763 0.812 - -
59. C20H6orf58_1 C20H6orf58_1 216 1.575 0.820 - - - - - 0.755 - -
60. palm1b ENSDARG00000007818 2128 1.571 - 0.805 - - - - - - 0.766 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
61. NIPAL4 ENSDARG00000059365 597 1.571 0.784 - - - - - 0.787 - - NIPA like domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-412]
62. TCIRG1 TCIRG1 875 1.566 - - - - - 0.700 0.866 - -
63. zgc:64085 zgc:64085 955 1.565 - - - - - 0.747 0.818 - -
64. tagln3b ENSDARG00000058394, ENSDARG00000115045 2756 1.563 - 0.809 - - - - 0.754 - - transgelin 3b [Source:ZFIN;Acc:ZDB-GENE-030131-4199]
65. bin3 ENSDARG00000099651 3295 1.562 0.847 - - - - - 0.715 - - bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
66. atp6v0ca ENSDARG00000057853 23277 1.561 - - - - - 0.831 0.730 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
67. cd9a ENSDARG00000005842 1708 1.56 - - - - - 0.773 0.787 - - CD9 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-1175]
68. SPAG9 ENSDARG00000078142 629 1.559 0.713 0.846 - - - - - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
69. hcfc2 ENSDARG00000058127 490 1.558 0.808 - - - - 0.750 - - - host cell factor C2 [Source:ZFIN;Acc:ZDB-GENE-050417-203]
70. tmem106ba ENSDARG00000101936 549 1.556 - 0.822 - - - - 0.734 - - transmembrane protein 106Ba [Source:ZFIN;Acc:ZDB-GENE-040426-1336]
71. arhgef4 ENSDARG00000012914 1464 1.556 - - - - - 0.764 - - 0.792 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
72. lcat ENSDARG00000099424 357 1.555 - 0.806 - - - 0.749 - - - lecithin-cholesterol acyltransferase [Source:ZFIN;Acc:ZDB-GENE-010716-3]
73. C3_1 C3_1 637 1.552 - 0.761 - - - - 0.791 - -
74. CHDH ENSDARG00000100304 2257 1.551 - - - - - 0.735 0.816 - - choline dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-120111-1]
75. ostf1 ENSDARG00000091555, ENSDARG00000114550 582 1.55 - 0.737 - - - - - - 0.813 osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
76. LDLR LDLR 838 1.549 - - - - - 0.731 0.818 - -
77. C21H18orf25 C21H18orf25 800 1.547 - 0.726 - - - - - - 0.821
78. si:dkey-183n20.15 ENSDARG00000094265 190 1.544 - - - - - 0.815 0.729 - - si:dkey-183n20.15 [Source:ZFIN;Acc:ZDB-GENE-041001-160]
79. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.543 0.740 - - - - - - - 0.803 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
80. RANBP3 RANBP3 2513 1.542 - 0.772 - - - - - - 0.770
81. caly ENSDARG00000036008 1002 1.538 - 0.742 - - - - - - 0.796 calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
82. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.53 - - - - - - 0.740 - 0.790 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
83. ERMP1_1 ERMP1_1 616 1.53 - 0.722 - - - 0.808 - - -
84. dpydb ENSDARG00000010267 831 1.528 - 0.780 - - - - 0.748 - - dihydropyrimidine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-2459]
85. lum ENSDARG00000045580 5395 1.527 - - - - - 0.764 0.763 - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
86. twist1a ENSDARG00000030402 3748 1.522 - 0.728 - - - - 0.794 - - twist family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-000210-6]
87. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.521 - - - - - - 0.708 - 0.813 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
88. si:ch211-233g6.8 si:ch211-233g6.8 1005 1.515 0.806 - - - - - 0.709 - -
89. sptbn2 ENSDARG00000053956 8452 1.514 - 0.706 - - - 0.808 - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
90. CTIF ENSDARG00000090617 270 1.511 - - - - 0.707 - - - 0.804 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
91. cers5 ENSDARG00000002365 2540 1.511 - - - - - - 0.711 - 0.800 ceramide synthase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1740]
92. arid4a ENSDARG00000043873 4176 1.503 - - - - - 0.735 - - 0.768 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
93. sirt2 ENSDARG00000011488 5389 1.503 0.716 - - - - - 0.787 - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
94. pfkfb4l pfkfb4l 2539 1.502 - - - - - 0.701 - - 0.801
95. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.5 - - - - - 0.747 0.753 - - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
96. cadm4 ENSDARG00000040291 2284 1.5 - 0.745 - - - - - - 0.755 cell adhesion molecule 4 [Source:ZFIN;Acc:ZDB-GENE-041114-138]
97. pls3 ENSDARG00000037655 5175 1.5 - 0.776 - - - - 0.724 - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
98. slc47a1 ENSDARG00000046012 1426 1.5 - - - - - 0.795 0.705 - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
99. pgrmc1 ENSDARG00000054172 5423 1.498 - - - - - 0.741 0.757 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
100. VMO1_1 VMO1_1 828 1.497 - - - - - 0.745 0.752 - -

There are 1692 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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