Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col11a1b

Gene Name Gene ID Reads Annotation
col11a1b ENSDARG00000009014 9998 collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]










Genes with expression patterns similar to col11a1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col11a1b ENSDARG00000009014 9998 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
2. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 2.644 0.939 - - - 0.957 0.748 - - - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
3. immt ENSDARG00000102874 3435 2.627 0.984 - - - - 0.819 0.824 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
4. esd ENSDARG00000019496 3192 2.597 - - - - 0.980 0.765 0.852 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
5. jph1a ENSDARG00000058603 2852 2.578 0.977 0.719 - - - - 0.882 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
6. cilp ENSDARG00000053362 1429 2.537 0.983 0.709 - - - - 0.845 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
7. epas1b ENSDARG00000057671, ENSDARG00000113561, ENSDARG00000115742 1306 2.456 0.980 0.719 - - - - 0.757 - - endothelial PAS domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-060607-11]
8. kras ENSDARG00000010844 2885 2.441 0.958 - - - - 0.718 0.765 - - v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
9. limch1a ENSDARG00000074275 2981 2.436 - 0.788 - - - - 0.880 0.768 - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
10. ATP5J_2 ATP5J_2 2381 2.377 - 0.798 - - - 0.700 0.879 - -
11. tmem182 tmem182 12589 2.35 0.748 - - - - 0.715 0.887 - -
12. AKAP2 AKAP2 4178 2.35 - - - - - 0.735 0.839 0.776 -
13. rai14 ENSDARG00000039974, ENSDARG00000111103 916 2.332 - - - - - 0.705 0.818 0.809 - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
14. FHOD3_1 FHOD3_1 983 2.322 - 0.798 - - - 0.714 0.810 - -
15. mrps33 ENSDARG00000020015 3551 2.307 - 0.763 - - - 0.714 0.830 - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
16. chrna1 ENSDARG00000009021 2931 2.3 - 0.731 - - - 0.708 0.861 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
17. alg3 ENSDARG00000053155 1843 2.279 - 0.745 - - - 0.701 0.833 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
18. frmd6 ENSDARG00000002332 2698 2.261 - 0.733 - - - - 0.750 0.778 - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
19. lpl ENSDARG00000087697 2578 2.246 - 0.749 - - - 0.733 0.764 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
20. emc1 ENSDARG00000057255 3582 2.206 - 0.787 - - - 0.704 0.715 - - ER membrane protein complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-98]
21. thbs4b ENSDARG00000020072 2500 2.182 - 0.701 - - - - 0.747 0.734 - thrombospondin 4b [Source:ZFIN;Acc:ZDB-GENE-020708-4]
22. itm2ca ENSDARG00000043448 1265 1.965 0.975 - - - 0.990 - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
23. arf6b ENSDARG00000052928 4585 1.929 0.943 - - - 0.986 - - - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
24. ARHGEF5 2727 1.903 0.911 - - - 0.992 - - - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
25. selt1a 9746 1.878 0.918 - - - - - - - 0.960 selenoprotein T, 1a
26. anxa6 ENSDARG00000013335 3588 1.86 0.983 - - - - - 0.877 - - annexin A6 [Source:ZFIN;Acc:ZDB-GENE-030707-3]
27. mdh2 ENSDARG00000043371 14485 1.848 - - - - 0.920 - 0.928 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
28. gars ENSDARG00000059070 17015 1.831 0.914 - - - - - 0.917 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
29. minos1 ENSDARG00000101619 5273 1.793 - - - - 0.965 - 0.828 - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
30. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 1.788 - - - - 0.990 - 0.798 - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
31. nop2 ENSDARG00000043304 2511 1.788 0.977 0.811 - - - - - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
32. lama4 ENSDARG00000020785 1522 1.785 - - - - 0.988 - 0.797 - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
33. tns1 tns1 5891 1.778 - 0.852 - - - - 0.926 - -
34. cdk5 ENSDARG00000056683 1998 1.771 - 0.776 - - 0.995 - - - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
35. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.771 - 0.786 - - 0.985 - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
36. eif2s1b ENSDARG00000052178 11961 1.771 0.870 - - - - - 0.901 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
37. ube2a ENSDARG00000098466 12765 1.77 - - - - 0.923 - 0.847 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
38. faua ENSDARG00000099022 82901 1.769 - - - - - - 0.876 - 0.893 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
39. slc20a1b ENSDARG00000010641 2564 1.768 - - - - 0.992 - 0.776 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
40. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 1.762 - - - - 0.985 - - 0.777 - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
41. atl3 ENSDARG00000004270 2806 1.762 0.960 - - - - - - 0.802 - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
42. cd248b ENSDARG00000077938 2561 1.76 - 0.867 - - - - 0.893 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
43. ammecr1 ENSDARG00000012892 14475 1.758 0.908 - - - - - - 0.850 - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
44. myom1a ENSDARG00000061249 10230 1.757 0.885 - - - - - 0.872 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
45. BX511021.1 ENSDARG00000073936 647 1.757 0.975 0.782 - - - - - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
46. vars ENSDARG00000044575 1367 1.753 0.983 - - - - - 0.770 - - valyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-010601-1]
47. eif3d ENSDARG00000021257 1524 1.742 - - - - 0.992 - 0.750 - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
48. CABZ01092303.1 CABZ01092303.1 8825 1.733 - - - - 0.894 - - 0.839 -
49. clgn ENSDARG00000009315 993 1.731 - 0.742 - - 0.989 - - - - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
50. surf4 ENSDARG00000104647 4203 1.727 - 0.765 - - - - - - 0.962 surfeit gene 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1426]
51. sox6 ENSDARG00000015536 7728 1.725 - - - - - 0.879 0.846 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
52. znf280d ENSDARG00000077013 1387 1.723 - - - - 0.993 - 0.730 - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
53. mrpl11 ENSDARG00000013075 2927 1.723 - - - - 0.988 - 0.735 - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
54. ipo4 ENSDARG00000041493 1578 1.722 - 0.729 - - 0.993 - - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
55. ryr1a ENSDARG00000011422 2377 1.721 0.978 0.743 - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
56. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 1.717 - - - - - 0.756 - - 0.961 TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
57. hadhb ENSDARG00000102055 9700 1.715 - - - - 0.926 - 0.789 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
58. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.715 - - - - - 0.783 0.932 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
59. si:ch73-131e21.5 si:ch73-131e21.5 1895 1.708 - - - - 0.963 0.745 - - -
60. slc25a5 ENSDARG00000092553 626 1.708 0.979 - - - - - 0.729 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
61. nid1a ENSDARG00000068710 3948 1.707 - - - - - 0.792 0.915 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
62. dnajc11 1939 1.702 0.979 0.723 - - - - - - - DnaJ heat shock protein family (Hsp40) member C11
63. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.701 - - - - 0.891 - 0.810 - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
64. tenm3 ENSDARG00000005479 3799 1.7 0.975 0.725 - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
65. nmt1a ENSDARG00000052966 5918 1.7 - 0.709 - - 0.991 - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
66. ppp3r1b ENSDARG00000069360 2814 1.698 0.925 - - - - - 0.773 - - protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b [Source:ZFIN;Acc:ZDB-GENE-040912-18]
67. tomm34 ENSDARG00000001557 1874 1.696 - 0.899 - - - - 0.797 - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
68. fam89a ENSDARG00000079979 4375 1.696 - - - - 0.973 - - 0.723 - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
69. wu:fb55g09 6015 1.696 - - - - 0.961 - 0.735 - - wu:fb55g09
70. sgk2b ENSDARG00000006598 1039 1.695 0.974 - - - - - 0.721 - - serum/glucocorticoid regulated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-44]
71. ck2a1 ck2a1 3749 1.689 - 0.709 - - 0.980 - - - -
72. acsl1 acsl1 4216 1.689 - - - - - 0.788 0.901 - -
73. chst14 ENSDARG00000043011 345 1.684 0.973 - - - - - 0.711 - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
74. pygmb ENSDARG00000013317 5454 1.682 - 0.823 - - - - 0.859 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
75. dyrk2 ENSDARG00000094646 2163 1.678 - 0.822 - - - - 0.856 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
76. phex ENSDARG00000062363 1413 1.672 0.941 - - - - - 0.731 - - phosphate regulating endopeptidase homolog, X-linked [Source:ZFIN;Acc:ZDB-GENE-030103-2]
77. sparc ENSDARG00000019353 38281 1.67 0.947 - - - - - - 0.723 - secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
78. serpinf1 ENSDARG00000069048 2083 1.668 - 0.796 - - - - 0.872 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
79. crtap ENSDARG00000018010 7722 1.667 0.918 0.749 - - - - - - - cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
80. cox7c ENSDARG00000104537 12169 1.666 - - - - - 0.730 0.936 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
81. arid3b ENSDARG00000104034 16303 1.666 - - - - 0.705 - - - 0.961 AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
82. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 1.666 - - - - - 0.724 - - 0.942 zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
83. TMEM185A TMEM185A 5505 1.664 - - - - - - 0.702 - 0.962
84. eef2k ENSDARG00000035835 2906 1.661 - 0.779 - - - - 0.882 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
85. ntmt1 ENSDARG00000022399 5779 1.659 - 0.760 - - - - 0.899 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
86. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.658 0.918 - - - - - 0.740 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
87. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.657 - 0.766 - - - - 0.891 - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
88. tceb1b 14935 1.655 - - - - 0.904 - 0.751 - - transcription elongation factor B (SIII), polypeptide 1b
89. tnnc1b ENSDARG00000037539 13945 1.654 - 0.825 - - - - 0.829 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
90. slc43a1b ENSDARG00000037748 1406 1.653 - 0.835 - - - - 0.818 - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
91. heatr3 ENSDARG00000036076 944 1.65 - 0.817 - - - - 0.833 - - HEAT repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1876]
92. zgc:193541 ENSDARG00000092873 21276 1.644 - - - - - 0.726 0.918 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
93. naa15a ENSDARG00000003213 5889 1.637 - - - - - 0.738 0.899 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
94. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.636 - 0.756 - - - - 0.880 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
95. fitm1 ENSDARG00000056464 1759 1.636 - 0.753 - - - - 0.883 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
96. znf106a ENSDARG00000016651 6049 1.632 - 0.741 - - - - 0.891 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
97. chchd3 chchd3 4139 1.631 - 0.812 - - - - 0.819 - -
98. sptb ENSDARG00000030490 7128 1.631 - 0.776 - - - - 0.855 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
99. eif2s2 ENSDARG00000053047 15904 1.628 - - - - - 0.770 0.858 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
100. CU633479.5 ENSDARG00000114818 1815 1.628 - 0.786 - - - - 0.842 - -

There are 1712 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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