Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for col11a1a

Gene Name Gene ID Reads Annotation
col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]










Genes with expression patterns similar to col11a1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
2. col2a1a ENSDARG00000069093, ENSDARG00000111202 50276 2.492 0.917 - - - 0.754 0.821 - - - collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
3. col9a2 ENSDARG00000024492 20234 2.481 0.957 0.728 - - - 0.796 - - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
4. rpl4 ENSDARG00000041182 18655 2.461 - - 0.798 - - - 0.932 - 0.731 ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
5. col9a1 col9a1 34481 2.327 0.775 - - - - 0.839 0.713 - -
6. tnni1al 8272 1.733 0.783 - - - - - 0.950 - - troponin I, skeletal, slow like, transcript variant X1
7. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 1.729 0.962 - - - - 0.767 - - - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
8. epyc ENSDARG00000056950 7783 1.714 0.948 - - - - 0.766 - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
9. CABZ01044297.1 CABZ01044297.1 2015 1.707 0.932 - - - - 0.775 - - -
10. smyd2b ENSDARG00000005629 8181 1.696 0.766 - - - - - 0.930 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
11. si:dkeyp-12a9.5 3058 1.677 0.916 - - - - 0.761 - - - si:dkeyp-12a9.5
12. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 1.676 - 0.761 - - - - 0.915 - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
13. ntla ntla 926 1.666 0.886 - - - - 0.780 - - -
14. col9a3 ENSDARG00000037845 6564 1.664 0.902 - - - - 0.762 - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
15. cmn ENSDARG00000055527 14039 1.654 0.952 0.702 - - - - - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
16. PAQR4 PAQR4 2150 1.643 0.903 - - - - 0.740 - - -
17. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 1.64 - - 0.727 - - - 0.913 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
18. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.637 0.913 - - - - 0.724 - - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
19. rtn4a ENSDARG00000044601, ENSDARG00000112237 24526 1.636 0.702 - - - - - 0.934 - - reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
20. susd5 ENSDARG00000088277 439 1.599 0.873 - - - - 0.726 - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
21. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.59 0.878 - - - - 0.712 - - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
22. chad ENSDARG00000045071 903 1.589 0.823 - - - - 0.766 - - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
23. CABZ01079764.1 CABZ01079764.1 12103 1.588 0.820 - - - - 0.768 - - -
24. smtnl1 ENSDARG00000041257 7410 1.568 0.864 0.704 - - - - - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
25. COBLL1_1 COBLL1_1 787 1.568 0.832 - - - - 0.736 - - -
26. CU469518.1 CU469518.1 214 1.559 0.840 - - - - 0.719 - - -
27. zgc:194470 zgc:194470 210 1.559 0.822 - - - - 0.737 - - -
28. myhz2 ENSDARG00000012944 69921 1.556 0.752 0.804 - - - - - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
29. col1a1b ENSDARG00000035809 88057 1.551 - - - 0.849 0.702 - - - - collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
30. acana ENSDARG00000035891 118 1.529 0.791 - - - - 0.738 - - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
31. zgc:66286 zgc:66286 118947 1.508 0.773 - - - - - 0.735 - -
32. ucmab ENSDARG00000005485 1808 1.507 0.764 - - - - 0.743 - - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
33. BX842614.2 BX842614.2 799 1.488 0.722 - - - - 0.766 - - -
34. tmem161a ENSDARG00000012790 16094 1.452 0.703 - - - 0.749 - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
35. si:dkey-6n6.1 ENSDARG00000062487 222 1.434 0.711 - - - - 0.723 - - - si:dkey-6n6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-80]
36. neb ENSDARG00000032630, ENSDARG00000109273 19493 1.412 0.704 - - - 0.708 - - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
37. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.944 - - - - - - 0.944 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
38. mybpc3 ENSDARG00000011615 7271 0.941 - - - - - - 0.941 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
39. ntd5 ENSDARG00000040944 4988 0.933 0.933 - - - - - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
40. vbp1 ENSDARG00000030241 10619 0.93 - - - - - - 0.930 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
41. glulb ENSDARG00000100003, ENSDARG00000113742 19292 0.93 - - - - - - 0.930 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
42. sdprb sdprb 13647 0.929 - - - - - - 0.929 - -
43. zgc:86725 2559 0.927 0.927 - - - - - - - - zgc:86725
44. psmb1 ENSDARG00000009640 8628 0.926 - - - - - - 0.926 - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
45. selt2 12741 0.925 - - - - - - 0.925 - - selenoprotein T, 2
46. rhoad rhoad 8007 0.925 - - - - - - 0.925 - -
47. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 0.925 - - - - - - 0.925 - -
48. clasp2 ENSDARG00000020345 3382 0.925 - - - - - - 0.925 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
49. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 0.924 - - - - - - 0.924 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
50. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 0.924 - - - - - - 0.924 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
51. foxp1a ENSDARG00000004843 3961 0.924 - - - - - - 0.924 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
52. fam133b ENSDARG00000013863 5070 0.924 - - - - - - 0.924 - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
53. SEMA5B SEMA5B 1316 0.923 - - - - - - 0.923 - -
54. atp2a1l ENSDARG00000035458 6222 0.923 - - - - - - 0.923 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
55. kpnb1 ENSDARG00000104889 9282 0.923 - - - - - - 0.923 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
56. sfrp5 ENSDARG00000039041 1777 0.923 - - - - - - 0.923 - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
57. aaas ENSDARG00000102274 1192 0.923 - - - - - - 0.923 - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
58. map7d3 ENSDARG00000060771 1739 0.923 - - - - - - 0.923 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
59. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.923 - - - - - - 0.923 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
60. CR548630.1 CR548630.1 3301 0.922 - - - - - - 0.922 - -
61. SGPP1 ENSDARG00000060534 1802 0.922 - - - - - - 0.922 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
62. si:ch211-71n6.4 ENSDARG00000102234 2499 0.922 - - - - - - 0.922 - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
63. klf11a ENSDARG00000030844 3972 0.922 - - - - - - 0.922 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
64. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 0.921 - - - - - - 0.921 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
65. CAPN2 CAPN2 1497 0.921 - - - - - - 0.921 - -
66. hspe1 ENSDARG00000056167 21636 0.92 - - - - - - 0.920 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
67. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 0.919 - - - - - - 0.919 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
68. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.919 - - - - - - 0.919 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
69. syncrip ENSDARG00000040184 24690 0.915 - - - - - - 0.915 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
70. col11a2 ENSDARG00000012422 3204 0.912 0.912 - - - - - - - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
71. h2afvb ENSDARG00000116491 35692 0.909 - - - - - - 0.909 - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
72. tnni2b.1 ENSDARG00000035958 51597 0.907 - - - - - - 0.907 - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
73. apg3l apg3l 5153 0.905 - - - - - - 0.905 - -
74. matn4 ENSDARG00000015947 10967 0.904 0.904 - - - - - - - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
75. BX322608.1 ENSDARG00000111690 326 0.904 0.904 - - - - - - - -
76. rpl35 ENSDARG00000018334 69583 0.897 - - - - - - 0.897 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
77. pi15a ENSDARG00000045378 2361 0.892 0.892 - - - - - - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
78. rpsa ENSDARG00000019181 93440 0.887 - - - - - - 0.887 - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
79. pkmb ENSDARG00000099860 25094 0.887 0.887 - - - - - - - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
80. tegt ENSDARG00000077934 27182 0.883 - - - - - - 0.883 - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
81. plod2 ENSDARG00000011821 1656 0.882 0.882 - - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
82. lect1 7551 0.881 0.881 - - - - - - - - leukocyte cell derived chemotaxin 1, transcript variant X1
83. tgfbi ENSDARG00000071586 17779 0.878 0.878 - - - - - - - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
84. f11r f11r 16668 0.873 - - - - - - 0.873 - -
85. postnb ENSDARG00000104267 28076 0.865 - 0.865 - - - - - - - periostin, osteoblast specific factor b [Source:ZFIN;Acc:ZDB-GENE-030131-9120]
86. cirbp cirbp 88363 0.863 - - - - - - 0.863 - -
87. PLXDC2 ENSDARG00000059950 220 0.862 0.862 - - - - - - - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
88. SMOC1 ENSDARG00000088255 507 0.861 0.861 - - - - - - - - SPARC related modular calcium binding 1 [Source:ZFIN;Acc:ZDB-GENE-110310-7]
89. rps23 ENSDARG00000021838 145026 0.858 - - - - - - 0.858 - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
90. serbp1a ENSDARG00000074242 10818 0.855 - - 0.855 - - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
91. BX470254.1 ENSDARG00000097402 1389 0.85 0.850 - - - - - - - -
92. loxl2a ENSDARG00000044010 1906 0.849 0.849 - - - - - - - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
93. ak1 ENSDARG00000001950 26964 0.847 - - - - - - - - 0.847 adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
94. cyr61l1 ENSDARG00000035422, ENSDARG00000112039, ENSDARG00000114683 332 0.847 0.847 - - - - - - - - cysteine-rich, angiogenic inducer 61 like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-136]
95. kctd5 kctd5 13455 0.845 - - 0.845 - - - - - -
96. lgals1l1 ENSDARG00000088711 4515 0.845 0.845 - - - - - - - - lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
97. flna ENSDARG00000074201 26242 0.844 - - - - - - 0.844 - - filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
98. flncb ENSDARG00000018820 5595 0.842 - - 0.842 - - - - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
99. mt-nd3 ENSDARG00000063914 62872 0.835 - - - - - - 0.835 - - NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
100. ptrfa ptrfa 4363 0.833 0.833 - - - - - - - -

There are 306 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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