Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cnot3b

Gene Name Gene ID Reads Annotation
cnot3b ENSDARG00000019842 838 CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]










Genes with expression patterns similar to cnot3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cnot3b ENSDARG00000019842 838 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
2. KLF8 ENSDARG00000060661 219 2.779 - 0.997 - - - - 0.845 - 0.937 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
3. larp1 ENSDARG00000101722 976 2.617 - 0.994 - - - 0.722 - - 0.901 La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
4. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 2.321 - - - - - - 0.761 0.734 0.826 glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
5. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.917 - 0.990 - - - - - - 0.927 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
6. aqr ENSDARG00000016775 1581 1.904 - 0.984 - - - - - - 0.920 aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
7. eya3 ENSDARG00000036100 1965 1.894 - 0.996 - - - - - - 0.898 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
8. CHD1 ENSDARG00000103787 1645 1.886 - 0.993 - - - - - - 0.893 chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
9. tpst1 ENSDARG00000073872 2490 1.881 - 0.989 - - - - - - 0.892 tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
10. SETDB2 ENSDARG00000101462 249 1.878 - 0.996 - - - 0.882 - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
11. prr12a ENSDARG00000074229 1668 1.849 - 0.997 - - - - - - 0.852 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
12. tox4 tox4 1671 1.833 - 0.996 - - - - - - 0.837
13. ankhd1 ENSDARG00000077860 5510 1.833 - 0.948 - - - - - - 0.885 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
14. tsc22d1 ENSDARG00000038306 2413 1.812 - 0.995 - - - - - - 0.817 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
15. OMG OMG 1202 1.792 - 0.951 - - - 0.841 - - -
16. si:dkey-114c15.7 237 1.783 - - - - - - - 0.834 0.949 si:dkey-114c15.7
17. clcn5 clcn5 492 1.781 - 0.980 - - - 0.801 - - -
18. thsd7ba ENSDARG00000095022 231 1.773 - - - - - - 0.830 - 0.943 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
19. appl1 1019 1.766 - 0.997 - - - 0.769 - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
20. pex14 ENSDARG00000028322 1087 1.761 - 0.982 - - - 0.779 - - - peroxisomal biogenesis factor 14 [Source:ZFIN;Acc:ZDB-GENE-060130-169]
21. etfa ENSDARG00000101631 2946 1.745 - 0.959 - - - 0.786 - - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
22. ube3d ENSDARG00000026178 244 1.739 - - - - - 0.795 - - 0.944 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
23. slc6a6a ENSDARG00000012534 183 1.736 - - - - - - - 0.795 0.941 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
24. wipf1 wipf1 760 1.726 - 0.997 - - - 0.729 - - -
25. ncoa6 ENSDARG00000071272 759 1.726 - - - - - - - 0.795 0.931 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
26. stxbp5b ENSDARG00000029234 760 1.722 - 0.994 - - - 0.728 - - - syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
27. pus7 ENSDARG00000031774 195 1.709 - - - - - - - 0.783 0.926 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
28. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.705 - 0.929 - - - - - - 0.776 translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
29. rerea ENSDARG00000077353 4162 1.691 - 0.988 - - - - - - 0.703 arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
30. nadl1.2 695 1.682 - - - - - - - 0.804 0.878 neural adhesion molecule L1.2, transcript variant X1
31. rusc1 ENSDARG00000078125 617 1.68 - - - - - - 0.762 - 0.918 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
32. adam17b ENSDARG00000093093 792 1.672 - - - - - 0.754 - - 0.918 ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
33. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.667 - - - - - - 0.887 0.780 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
34. SNAP91 ENSDARG00000098809 556 1.66 - - - - - - 0.715 - 0.945 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
35. si:ch211-133l11.10 ENSDARG00000005626 381 1.659 - - - - - - 0.724 - 0.935 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
36. rac3a ENSDARG00000090062 394 1.657 - - - - - - 0.713 - 0.944 Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
37. TUBB8P7_2 TUBB8P7_2 565 1.656 - - - - - - 0.716 - 0.940
38. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.655 - - - - - - 0.743 - 0.912 FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
39. xrcc6bp1 662 1.646 - - - - - - - 0.734 0.912 XRCC6 binding protein 1
40. bmpr1bb ENSDARG00000102742 1036 1.644 - - - - - - - 0.746 0.898 bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
41. kcnq5a ENSDARG00000069954 492 1.644 - - - - - - 0.729 - 0.915 potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
42. RBM12B ENSDARG00000079717 541 1.644 - - - - - - - 0.728 0.916 RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
43. BX088708.1 BX088708.1 6503 1.641 - - - - - 0.751 - - 0.890
44. p4hb ENSDARG00000105116, ENSDARG00000116847 6885 1.633 - 0.718 - - - - - - 0.915 prolyl 4-hydroxylase, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-080610-1]
45. adcyap1a ENSDARG00000004015 67 1.631 - - - - - - 0.845 0.786 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
46. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.629 - - - - - 0.726 - - 0.903 zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
47. rbfox3 rbfox3 1443 1.627 - - - - - - 0.798 - 0.829
48. csdc2b 82 1.625 - - - - - 0.804 0.821 - - cold shock domain containing C2, RNA binding b
49. b3gntl1 ENSDARG00000043431 50 1.619 - - - - - 0.774 0.845 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
50. uchl1 ENSDARG00000026871 1578 1.617 - - - - - - 0.792 - 0.825 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-030131-3844]
51. wif1 ENSDARG00000005541 1689 1.611 - - - - - 0.716 - - 0.895 wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
52. ck2a2a ck2a2a 1695 1.608 - - - - - 0.808 - 0.800 -
53. mntb ENSDARG00000073988 1023 1.608 - - - - - 0.723 - - 0.885 MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
54. pcdh18a ENSDARG00000089805 1096 1.606 - - - - - - 0.797 - 0.809 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
55. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.602 - - - - - - 0.785 0.817 - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
56. arid1b ENSDARG00000092503 1376 1.601 - - - - - - - 0.735 0.866 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
57. CHL1 CHL1 1553 1.591 - - - - - - 0.724 - 0.867
58. prune2 ENSDARG00000059423, ENSDARG00000116519 646 1.559 - - - - - - 0.792 0.767 - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
59. KIF1A KIF1A 1686 1.558 - - - - - - 0.778 - 0.780
60. znf207a ENSDARG00000015538 2630 1.557 - - - - - 0.819 - - 0.738 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
61. cdc23 ENSDARG00000044484 767 1.545 - - - - - - 0.719 0.826 - CDC23 (cell division cycle 23, yeast, homolog) [Source:ZFIN;Acc:ZDB-GENE-040426-866]
62. C12H10orf2 C12H10orf2 245 1.529 - - - - - 0.701 0.828 - -
63. bmp6 ENSDARG00000015686 211 1.526 - - - - - 0.788 0.738 - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
64. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 1.518 - - - - - 0.814 0.704 - - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
65. slc1a2b ENSDARG00000102453 3136 1.516 - - - - - - 0.780 - 0.736 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
66. ap3m2 ENSDARG00000016128 851 1.514 - - - - - - 0.790 0.724 - adaptor related protein complex 3 subunit mu 2 [Source:ZFIN;Acc:ZDB-GENE-021022-2]
67. sesn3 ENSDARG00000015822 5328 1.514 - - - - - 0.728 - - 0.786 sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
68. cry2b cry2b 517 1.513 - - - - - 0.805 0.708 - -
69. stmn2a ENSDARG00000033234 2272 1.509 - - - - - - 0.734 - 0.775 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
70. nckap1 ENSDARG00000060853 3540 1.505 - 0.791 - - - - - - 0.714 NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
71. p2rx3b ENSDARG00000029718 105 1.503 - - - - - - 0.732 0.771 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
72. STMN3 ENSDARG00000038465 1009 1.502 - - - - - - 0.751 0.751 - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
73. acsl4a ENSDARG00000004078 4241 1.497 - - - - - 0.705 - - 0.792 acyl-CoA synthetase long chain family member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1565]
74. ddx56 ENSDARG00000020913 1070 1.487 - - - - - 0.728 - 0.759 - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
75. slc44a5b ENSDARG00000057419 534 1.484 - - - - - - 0.735 0.749 - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
76. SLC4A7 ENSDARG00000073952 474 1.458 - - - - - 0.736 0.722 - - solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:ZFIN;Acc:ZDB-GENE-140106-104]
77. fam131bb ENSDARG00000070575 1054 1.457 - - - - - - 0.720 0.737 - family with sequence similarity 131, member Bb [Source:ZFIN;Acc:ZDB-GENE-100922-12]
78. slc25a1b ENSDARG00000076381 6213 1.454 - 0.742 - - - 0.712 - - - slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
79. tmie ENSDARG00000069423 305 1.449 - - - - - - 0.724 0.725 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
80. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.998 - 0.998 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
81. lrrc23 ENSDARG00000006174 234 0.997 - 0.997 - - - - - - - leucine rich repeat containing 23 [Source:ZFIN;Acc:ZDB-GENE-041010-153]
82. csrnp2 ENSDARG00000075972 1650 0.997 - 0.997 - - - - - - - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
83. AL929204.1 AL929204.1 773 0.997 - 0.997 - - - - - - -
84. DUSP28 ENSDARG00000059695 1135 0.997 - 0.997 - - - - - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
85. ptpn9a ENSDARG00000077495 2295 0.997 - 0.997 - - - - - - - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
86. acadsb ENSDARG00000076780 2382 0.997 - 0.997 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
87. slc31a2 ENSDARG00000076092 251 0.997 - 0.997 - - - - - - - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]
88. mis18a ENSDARG00000035333 555 0.997 - 0.997 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
89. fosl2 ENSDARG00000040623 2041 0.997 - 0.997 - - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
90. mxra7 ENSDARG00000095300 332 0.997 - 0.997 - - - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]
91. ubn2 ubn2 534 0.997 - 0.997 - - - - - - -
92. C25H1orf51 C25H1orf51 2460 0.997 - 0.997 - - - - - - -
93. tpi1a ENSDARG00000025012 562 0.996 - 0.996 - - - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
94. si:dkey-11e23.9 ENSDARG00000095586 114 0.996 - 0.996 - - - - - - - si:dkey-11e23.9 [Source:ZFIN;Acc:ZDB-GENE-041014-301]
95. sept8b ENSDARG00000014233 223 0.996 - 0.996 - - - - - - - septin 8b [Source:ZFIN;Acc:ZDB-GENE-070424-3]
96. ppp1r14ba ENSDARG00000044541 792 0.996 - 0.996 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ba [Source:ZFIN;Acc:ZDB-GENE-060825-331]
97. ptpn4b ENSDARG00000000183 425 0.996 - 0.996 - - - - - - - protein tyrosine phosphatase, non-receptor type 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6259]
98. zgc:123295 ENSDARG00000056324 361 0.996 - 0.996 - - - - - - - zgc:123295 [Source:ZFIN;Acc:ZDB-GENE-051127-11]
99. zgc:136870 ENSDARG00000054837, ENSDARG00000109282 201 0.996 - 0.996 - - - - - - - zgc:136870 [Source:ZFIN;Acc:ZDB-GENE-060312-1]
100. RCSD1 RCSD1 144 0.996 - 0.996 - - - - - - -

There are 1848 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA