Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cnn3b

Gene Name Gene ID Reads Annotation
cnn3b ENSDARG00000029856 4807 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]










Genes with expression patterns similar to cnn3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cnn3b ENSDARG00000029856 4807 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
2. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 2.668 - 0.980 - - - - - 0.715 0.973 platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
3. npm1b ENSDARG00000037675 5448 2.628 - 0.988 - - 0.842 - 0.798 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
4. grb2b ENSDARG00000038059 9050 2.596 - 0.964 - - - - 0.774 - 0.858 growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
5. cand1 ENSDARG00000017841 8164 2.526 - - - - - 0.827 0.722 - 0.977 cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
6. lmnb1 ENSDARG00000044299 9817 2.46 - - - - 0.721 0.757 - - 0.982 lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
7. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.452 - - - - 0.955 0.792 0.705 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
8. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.42 - - - - 0.931 0.730 0.759 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
9. mycla ENSDARG00000006003 1866 2.418 - - - - - 0.723 0.721 - 0.974 MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
10. cldn12 ENSDARG00000003927 2024 2.338 - - - - 0.932 0.701 0.705 - - claudin 12 [Source:ZFIN;Acc:ZDB-GENE-010328-14]
11. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 2.324 - - - - 0.861 0.732 0.731 - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
12. TAF15 ENSDARG00000070019 5102 2.284 - - - 0.841 - - 0.708 0.735 - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
13. ddx39ab ENSDARG00000015111 11619 2.279 0.735 - - - - 0.738 0.806 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
14. smarce1 ENSDARG00000016871 9628 2.242 - - - - 0.704 0.768 0.770 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
15. kif22 ENSDARG00000102624 3694 2.187 - - - 0.756 - 0.724 0.707 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
16. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.962 - 0.997 - - - - - - 0.965 zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
17. myo9al1 myo9al1 1194 1.958 - 0.998 - - 0.960 - - - -
18. col4a1 ENSDARG00000055009 3083 1.954 - 0.993 - - - - - - 0.961 collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
19. COLGALT1 ENSDARG00000073974 5069 1.926 - - - - 0.961 - - - 0.965 collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
20. bambia ENSDARG00000055381 2922 1.913 - 0.970 - - 0.943 - - - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
21. NDUFA3 ENSDARG00000041400 7939 1.891 - 0.962 - - - - - - 0.929 NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
22. lmnb2 ENSDARG00000101624 11304 1.837 - 0.912 - - 0.925 - - - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
23. elavl1 11672 1.788 - 0.969 - - - 0.819 - - - ELAV like RNA binding protein 1, transcript variant X3
24. plagx ENSDARG00000036855 3768 1.763 - 0.995 - - - - 0.768 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
25. ZC3H4 ENSDARG00000078355 1888 1.762 - - - - - 0.789 - - 0.973 zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
26. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.741 - - - - 0.975 - 0.766 - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
27. abcf2a ENSDARG00000038785 2065 1.737 - - - - - - 0.763 - 0.974 ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
28. ube2v1 ENSDARG00000041875 5739 1.735 - 0.983 - - - - 0.752 - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
29. brd7 ENSDARG00000008380 3654 1.729 - - - - 0.981 - 0.748 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
30. pcdh18a ENSDARG00000089805 1096 1.72 - - - - 0.968 - - 0.752 - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
31. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.718 - - - - 0.952 0.766 - - - ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
32. eif5b ENSDARG00000016548 3972 1.715 - 0.979 - - - - 0.736 - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
33. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 1.715 - 0.998 - - - - 0.717 - - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
34. smad7 ENSDARG00000016858 1660 1.708 - - - - - 0.793 - - 0.915 SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
35. tdg tdg 3269 1.707 - - - - 0.964 0.743 - - -
36. prkcea ENSDARG00000003008 1118 1.704 - 0.999 - - - 0.705 - - - protein kinase C, epsilon a [Source:ZFIN;Acc:ZDB-GENE-030131-8191]
37. ZNF337_25 ZNF337_25 1713 1.702 - - - - - 0.730 - - 0.972
38. dhx9 ENSDARG00000079725 1241 1.702 - - - - 0.963 - - 0.739 - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
39. slit2 ENSDARG00000004246 5277 1.701 - 0.924 - - - - 0.777 - - slit homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-3]
40. glyr1 ENSDARG00000099213 6906 1.7 - 0.974 - - - - - 0.726 - glyoxylate reductase 1 homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-041121-5]
41. nup98 ENSDARG00000074955 3998 1.699 - - - - 0.980 0.719 - - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
42. tnks tnks 1695 1.698 - - - - 0.946 0.752 - - -
43. dbn1 ENSDARG00000069113 4527 1.698 - - - - - - 0.735 - 0.963 drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
44. srsf1b ENSDARG00000017843 2760 1.697 - - - - - 0.730 - - 0.967 serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
45. csnk1a1_1 ENSDARG00000052674, ENSDARG00000112077 5195 1.696 - 0.980 - - - - 0.716 - - casein kinase 1, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-020419-19]
46. plxnb1b ENSDARG00000017211 4676 1.695 - - - - - - 0.722 - 0.973 plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
47. mllt10 ENSDARG00000045401 7557 1.692 - - - - - 0.774 - - 0.918 MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
48. znf143a ENSDARG00000012887 1393 1.688 - - - - 0.977 0.711 - - - zinc finger protein 143a [Source:ZFIN;Acc:ZDB-GENE-041114-154]
49. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.687 - 0.986 - - - 0.701 - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
50. ccnb1 ENSDARG00000051923 3226 1.68 - - 0.705 - 0.975 - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
51. zgc:77262 ENSDARG00000044545 5563 1.679 - - - - 0.926 - 0.753 - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
52. vps29 ENSDARG00000069521 5599 1.678 - 0.957 - - - - 0.721 - - vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
53. BX511086.1 BX511086.1 8308 1.677 - - - - - 0.837 0.840 - -
54. ppargc1b ENSDARG00000101569 3452 1.67 - - - - - - 0.703 - 0.967 peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
55. mapre1b ENSDARG00000002659 9119 1.669 - - - - 0.851 - - 0.818 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
56. eya3 ENSDARG00000036100 1965 1.669 - - - - 0.931 - 0.738 - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
57. nsfl1c ENSDARG00000087640 2226 1.665 - - - - - - 0.702 - 0.963 NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
58. dnajc1 ENSDARG00000001940 2848 1.66 - - - - 0.934 - 0.726 - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
59. PRRG1 ENSDARG00000043283 2779 1.66 - - - - 0.938 - 0.722 - - proline rich Gla (G-carboxyglutamic acid) 1 [Source:ZFIN;Acc:ZDB-GENE-041010-20]
60. sdc4 ENSDARG00000059906 10105 1.654 - - - - 0.927 - 0.727 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
61. polr2a ENSDARG00000099966 5706 1.653 - - - 0.850 - 0.803 - - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
62. timm10 ENSDARG00000069116 4459 1.652 - 0.914 - - - - 0.738 - - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
63. ANKRD11 ENSDARG00000051886 10024 1.649 - - - - - 0.753 0.896 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
64. prpf40a ENSDARG00000058467 6565 1.64 - - - - 0.908 - 0.732 - - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
65. hp1bp3 ENSDARG00000044669 23708 1.636 - - - - - 0.752 - - 0.884 heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
66. snrpf ENSDARG00000105037 10241 1.632 - - - - 0.778 - 0.854 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
67. plscr3b ENSDARG00000069432 8500 1.631 - - - - - - 0.715 - 0.916 phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
68. sri ENSDARG00000058593 13152 1.63 - - - - 0.781 - - - 0.849 sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
69. SERBP1 SERBP1 9276 1.629 - - - - - 0.837 0.792 - -
70. llgl1 ENSDARG00000009693 4205 1.615 - - - 0.868 - - 0.747 - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
71. sumo3a ENSDARG00000028119 13447 1.611 - - - - - 0.762 0.849 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
72. foxo3b ENSDARG00000042904 5046 1.611 - - - - 0.846 - 0.765 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
73. fubp1 ENSDARG00000029248 15259 1.608 - - - 0.759 0.849 - - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
74. nusap1 ENSDARG00000002403 6953 1.607 - - - - - 0.705 - - 0.902 nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
75. flot2a ENSDARG00000004830 5276 1.605 - - - - 0.904 - 0.701 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
76. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.603 - - - - 0.884 - 0.719 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
77. cbx5 ENSDARG00000061187 24026 1.602 - 0.882 - - - 0.720 - - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
78. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 1.6 - - - - - 0.808 0.792 - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
79. ptenb ENSDARG00000056623 5783 1.593 - - - - - 0.795 0.798 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
80. anp32b ENSDARG00000023330 25013 1.58 - - - - - - 0.704 - 0.876 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
81. h3f3a 66671 1.579 - - - - - - 0.773 0.806 - H3 histone, family 3A, transcript variant X1
82. slc1a2b ENSDARG00000102453 3136 1.573 - - - 0.703 0.870 - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
83. ilf3b ENSDARG00000105177 9473 1.568 - - - - - - 0.823 0.745 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
84. fscn1a ENSDARG00000059680 3999 1.559 - - - - - - 0.858 0.701 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
85. h2afvb ENSDARG00000116491 35692 1.556 - - - - - 0.795 - 0.761 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
86. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.553 - - - 0.743 - - - 0.810 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
87. GABARAP GABARAP 8341 1.543 - - - - 0.836 - 0.707 - -
88. atp6v1c1a ENSDARG00000023967 4611 1.541 - - - - - 0.796 0.745 - - ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
89. ywhaqb ENSDARG00000023323 28138 1.541 - - - - - 0.712 - 0.829 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
90. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.54 - - - - - 0.771 0.769 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
91. MAP4K4 ENSDARG00000098670 4665 1.533 0.753 - - - - 0.780 - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
92. znf865 ENSDARG00000036698 15532 1.529 - - - - - 0.705 0.824 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
93. ammecr1 ENSDARG00000012892 14475 1.525 - 0.801 - - - 0.724 - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
94. ctnnb1 ENSDARG00000014571 12004 1.518 - - - - - 0.735 - 0.783 - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
95. foxk2 ENSDARG00000030583 2982 1.512 - - - - - 0.702 - 0.810 - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
96. khsrp ENSDARG00000026489 15738 1.512 - - - - - 0.785 0.727 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
97. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.511 - - - 0.761 - - 0.750 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
98. rasa1a ENSDARG00000035535 2007 1.51 - - - - - 0.801 0.709 - - RAS p21 protein activator (GTPase activating protein) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4694]
99. hoxb1b ENSDARG00000054033, ENSDARG00000112663 1967 1.506 - - - - - 0.771 0.735 - - homeobox B1b [Source:ZFIN;Acc:ZDB-GENE-980526-290]
100. bri3bp ENSDARG00000010108 6295 1.506 - 0.790 - - - 0.716 - - - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]

There are 1119 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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