Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cnn1b

Gene Name Gene ID Reads Annotation
cnn1b ENSDARG00000102398 40 calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]










Genes with expression patterns similar to cnn1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cnn1b ENSDARG00000102398 40 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
2. si:dkey-4j21.1 17 2.673 1.000 0.883 - - - 0.790 - - - si:dkey-4j21.1, transcript variant X2
3. CABZ01032469.1 CABZ01032469.1 34 2.521 1.000 - - - - 0.804 0.717 - -
4. VASH1 ENSDARG00000092716 33 2 1.000 - - - 1.000 - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
5. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.969 - - - - 1.000 - - 0.969 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
6. si:dkey-92j16.1 si:dkey-92j16.1 1 1.944 - 0.944 - - 1.000 - - - -
7. nosip ENSDARG00000037958, ENSDARG00000112335 59 1.922 1.000 - - - - - 0.922 - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
8. nphp4 ENSDARG00000069014 77 1.901 - 0.944 - - - - - 0.957 - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
9. CABZ01065506.1 CABZ01065506.1 204 1.883 1.000 0.883 - - - - - - -
10. PGBD4 ENSDARG00000079328 20 1.883 1.000 0.883 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
11. BX548021.2 BX548021.2 4 1.883 1.000 0.883 - - - - - - -
12. si:ch211-10j20.7 si:ch211-10j20.7 8 1.883 1.000 0.883 - - - - - - -
13. lppr5b lppr5b 23 1.883 1.000 0.883 - - - - - - -
14. si:dkey-56m15.4 si:dkey-56m15.4 39 1.883 1.000 0.883 - - - - - - -
15. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1.883 1.000 0.883 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
16. CT030048.2 CT030048.2 3 1.883 - 0.883 - - 1.000 - - - -
17. CPNE8_1 CPNE8_1 140 1.87 - 0.924 - - - - - 0.946 -
18. BX511006.2 BX511006.2 29 1.851 - 0.883 - - - - - 0.968 -
19. 5S_rRNA_22 5S_rRNA_22 45 1.844 1.000 - 0.844 - - - - - -
20. BX323861.1 ENSDARG00000099765 37 1.819 1.000 - - - - 0.819 - - -
21. slc2a15b ENSDARG00000053269 899 1.811 - 0.883 - - - - - 0.928 - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
22. CABZ01053592.1 ENSDARG00000117388 6 1.79 1.000 - - - - 0.790 - - -
23. ft2 ENSDARG00000109567 5 1.79 - - - - 1.000 0.790 - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
24. cacna1aa ENSDARG00000037905 4 1.79 - - - - 1.000 0.790 - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
25. RBM11 ENSDARG00000090202 15 1.79 - - - - 1.000 0.790 - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
26. CABZ01019904.1 ENSDARG00000104193 6 1.788 - 0.788 - - 1.000 - - - -
27. helt ENSDARG00000056400 482 1.784 1.000 0.784 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
28. fam8a1 fam8a1 561 1.773 - - - - - - 0.840 0.933 -
29. PPFIA3 ENSDARG00000077053 310 1.762 0.879 0.883 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
30. TENM2 ENSDARG00000037122 48 1.761 0.878 0.883 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
31. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.757 0.874 0.883 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
32. XKR7 ENSDARG00000026333 175 1.739 0.856 0.883 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
33. CT573468.1 CT573468.1 283 1.739 - - - - - 0.790 - 0.949 -
34. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.737 0.854 0.883 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
35. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1.734 - 0.944 - - - 0.790 - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
36. RBBP6_8 RBBP6_8 10 1.734 - 0.944 - - - 0.790 - - -
37. si:dkey-249p7.4 ENSDARG00000096663 9 1.708 - 0.944 - - - - 0.764 - - si:dkey-249p7.4 [Source:ZFIN;Acc:ZDB-GENE-121214-270]
38. wdr19 ENSDARG00000037406 98 1.703 - 0.913 - - - - 0.790 - - WD repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-090313-277]
39. fhdc1 ENSDARG00000074812 934 1.703 0.799 - - - - - - 0.904 - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
40. GADD45G GADD45G 382 1.696 0.813 0.883 - - - - - - -
41. si:dkeyp-82a1.6 ENSDARG00000094336 228 1.689 0.905 - - - - - 0.784 - - si:dkeyp-82a1.6 [Source:ZFIN;Acc:ZDB-GENE-081105-150]
42. ccdc103 ENSDARG00000053455 81 1.685 - - - - - 0.763 0.922 - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
43. RAP1GAP2 RAP1GAP2 52 1.681 - - - - - 0.867 - - 0.814
44. rab14l ENSDARG00000035188 18 1.673 - 0.883 - - - 0.790 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
45. ftr76 ENSDARG00000076093 1 1.673 - 0.883 - - - 0.790 - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
46. RECK ENSDARG00000090039 15 1.673 - 0.883 - - - 0.790 - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
47. AC024175.21 AC024175.21 10 1.673 - 0.883 - - - 0.790 - - -
48. zgc:194665 ENSDARG00000004577 136 1.666 0.783 0.883 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
49. GABRG1 ENSDARG00000101995 201 1.666 0.722 0.944 - - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
50. dlg1 ENSDARG00000009677 706 1.66 0.787 - - - - - - 0.873 - discs, large homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010724-8]
51. BX530066.1 BX530066.1 42 1.653 0.863 - - - - 0.790 - - -
52. gpr22 gpr22 115 1.649 0.766 0.883 - - - - - - -
53. zgc:171459 ENSDARG00000077248 224 1.64 0.715 - - - - - - 0.925 - zgc:171459 [Source:ZFIN;Acc:ZDB-GENE-030131-2059]
54. scin ENSDARG00000010728, ENSDARG00000111092 437 1.635 0.752 0.883 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
55. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.613 0.730 0.883 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
56. zgc:174623 37 1.612 0.854 - - - - 0.758 - - - zgc:174623, transcript variant X1
57. trim24 ENSDARG00000103350 431 1.61 0.813 - - - - - 0.797 - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
58. CABZ01085177.1 ENSDARG00000104644 6 1.608 - 0.883 - - 0.725 - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
59. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.6 0.752 0.848 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
60. SV2B SV2B 208 1.599 0.733 - - - - - - 0.866 -
61. oca2 ENSDARG00000061303 22 1.581 - - - - - 0.790 0.791 - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
62. cadps2 ENSDARG00000013312, ENSDARG00000117190 144 1.578 - - - - - - 0.705 0.873 - Ca++-dependent secretion activator 2 [Source:ZFIN;Acc:ZDB-GENE-030903-1]
63. cep63 ENSDARG00000056862 194 1.576 - - - - - 0.805 0.771 - - centrosomal protein 63 [Source:ZFIN;Acc:ZDB-GENE-040426-1154]
64. SKOR2 SKOR2 1041 1.572 0.850 0.722 - - - - - - -
65. blvra ENSDARG00000059857 270 1.569 - - - - - 0.854 0.715 - - biliverdin reductase A [Source:ZFIN;Acc:ZDB-GENE-060929-312]
66. ggcta ENSDARG00000076406 33 1.56 - 0.770 - - - 0.790 - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
67. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 1.558 - - - - - 0.790 0.768 - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
68. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.539 0.826 0.713 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
69. syngr3b ENSDARG00000025034 290 1.53 0.721 0.809 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
70. BX682558.1 ENSDARG00000101975 30 1.528 0.738 - - - - 0.790 - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]
71. si:dkeyp-13d11.2 79 1.523 - 0.733 - - - 0.790 - - - si:dkeyp-13d11.2
72. dnm1b ENSDARG00000009281 219 1.498 0.780 0.718 - - - - - - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
73. naf1 ENSDARG00000057929, ENSDARG00000110711 426 1.473 0.700 - - - - - 0.773 - - nuclear assembly factor 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4546]
74. rfng ENSDARG00000019746 627 1.449 - - - - - - 0.704 0.745 - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-5418]
75. pdk3a ENSDARG00000014527 15 1 - - - - - - 1.000 - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
76. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
77. ZNF337_11 ZNF337_11 11 1 1.000 - - - - - - - -
78. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
79. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
80. NOTCH2NL NOTCH2NL 5 1 - - - - 1.000 - - - -
81. zgc:113210 ENSDARG00000002872 99 1 1.000 - - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
82. U5_6 U5_6 0 1 - - - - 1.000 - - - -
83. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
84. si:ch73-366i20.1_1 ENSDARG00000092949 1 1 - - - - 1.000 - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
85. BEGAIN BEGAIN 39 1 1.000 - - - - - - - -
86. sh2d1aa ENSDARG00000095348 4 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
87. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
88. BRINP1 ENSDARG00000078302 0 1 - - - - 1.000 - - - - bone morphogenetic protein/retinoic acid inducible neural-specific 1 [Source:ZFIN;Acc:ZDB-GENE-130530-847]
89. si:ch211-286b5.2 ENSDARG00000096514 6 1 - - - - 1.000 - - - - si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
90. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1 1.000 - - - - - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
91. IL4I1 IL4I1 4 1 - - - - 1.000 - - - -
92. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
93. si:dkey-285e18.5 ENSDARG00000093665 5 1 - - - - 1.000 - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
94. zgc:172253 ENSDARG00000074191 5 1 - - - - 1.000 - - - - zgc:172253 [Source:ZFIN;Acc:ZDB-GENE-080215-9]
95. CLDN20 26 1 1.000 - - - - - - - - claudin 20, transcript variant X2
96. TAF1C TAF1C 41 1 - - - - - - 1.000 - -
97. podn ENSDARG00000019025, ENSDARG00000113615 1 1 - - - - 1.000 - - - - podocan [Source:ZFIN;Acc:ZDB-GENE-100922-117]
98. si:dkey-50i6.6 ENSDARG00000099009 0 1 - - - - 1.000 - - - - si:dkey-50i6.6 [Source:ZFIN;Acc:ZDB-GENE-081104-420]
99. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
100. LEPROT 0 1 - - - - 1.000 - - - - leptin receptor overlapping transcript

There are 1597 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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