Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cnn1a

Gene Name Gene ID Reads Annotation
cnn1a ENSDARG00000017193 6 calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]










Genes with expression patterns similar to cnn1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cnn1a ENSDARG00000017193 6 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
2. si:dkey-84h14.3 si:dkey-84h14.3 3 2 - - 1.000 - - - - 1.000 -
3. crygmxl1 ENSDARG00000018797 7 2 - - 1.000 - - - - 1.000 - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
4. NOX4 3 2 - - - 1.000 - - - - 1.000 NADPH oxidase 4
5. crygm2d7 ENSDARG00000076572, ENSDARG00000116634 229 1.982 - - 1.000 - - - - 0.982 - crystallin, gamma M2d7 [Source:ZFIN;Acc:ZDB-GENE-060918-5]
6. crygm2d9 ENSDARG00000115701 28 1.952 - - 1.000 - - - - 0.952 - crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
7. sdr42e1 ENSDARG00000098838 25 1.947 1.000 - - 0.947 - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
8. sox11a ENSDARG00000077811 25 1.947 1.000 0.947 - - - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
9. BEND2_1 BEND2_1 45 1.941 1.000 0.941 - - - - - - -
10. lim2.5 ENSDARG00000041295 56 1.931 - - 1.000 - - - - 0.931 - lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]
11. zgc:165347_1 zgc:165347_1 69 1.908 - - 0.947 - - - - 0.961 -
12. zgc:173652 22 1.906 - 0.947 - - - - - - 0.959 zgc:173652
13. crygm2d1 ENSDARG00000087324 258 1.877 - - 0.969 - - - - 0.908 - crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
14. nrl ENSDARG00000100466 41 1.868 1.000 - - - - - - 0.868 - neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
15. crygm2d16 ENSDARG00000076790 129 1.867 - - 0.916 - - - - 0.951 - crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
16. crygm2d4 ENSDARG00000087164, ENSDARG00000115295 138 1.86 - - 0.927 - - - - 0.933 - crystallin, gamma M2d4 [Source:ZFIN;Acc:ZDB-GENE-060918-3]
17. crygm2d14 ENSDARG00000087301 66 1.858 - - 0.878 - - - - 0.980 - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
18. si:ch211-274p24.3 si:ch211-274p24.3 72 1.846 - 0.877 - - - - - 0.969 -
19. b4galnt3a ENSDARG00000078749 3 1.828 - 0.947 - - 0.881 - - - - beta-1,4-N-acetyl-galactosaminyl transferase 3a [Source:ZFIN;Acc:ZDB-GENE-060503-519]
20. porcnl ENSDARG00000052455 29 1.826 - 0.826 - - - - - 1.000 - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
21. fastkd1 ENSDARG00000056128 141 1.816 1.000 0.816 - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
22. crygm2d8 ENSDARG00000116164 698 1.808 - - 0.884 - - - - 0.924 - crystallin, gamma M2d8 [Source:ZFIN;Acc:ZDB-GENE-040718-321]
23. si:ch211-219a15.3 ENSDARG00000087659 12 1.8 1.000 - - - - - - 0.800 - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
24. si:dkey-51d8.11 8 1.8 - - - - 0.800 - - 1.000 - si:dkey-51d8.11, transcript variant X6
25. crygm2d10 ENSDARG00000087765 358 1.775 - - 0.836 - - - - 0.939 - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
26. lctla ENSDARG00000036139, ENSDARG00000116316 32 1.768 - - 1.000 - - - - 0.768 - lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]
27. BX927369.1 ENSDARG00000105047 21 1.744 1.000 0.744 - - - - - - -
28. si:dkey-78i1.2 si:dkey-78i1.2 15 1.74 - 0.883 - - 0.857 - - - -
29. crygm2d6 ENSDARG00000073874 38 1.73 - - 0.899 - - - - 0.831 - crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
30. si:ch211-212n6.16 si:ch211-212n6.16 314 1.729 - - 0.819 - - - - 0.910 -
31. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 1.728 - - 0.772 - - - - 0.956 - crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
32. crygm2d5 ENSDARG00000069792 207 1.724 - - 0.929 - - - - 0.795 - crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
33. BX927237.2 BX927237.2 16 1.722 - - - 0.722 - - - 1.000 -
34. crygmxl2 ENSDARG00000074001 282 1.72 - - 0.810 - - - - 0.910 - crystallin, gamma MX, like 2 [Source:ZFIN;Acc:ZDB-GENE-050522-401]
35. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1.716 1.000 - 0.716 - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
36. si:ch211-244b2.4 ENSDARG00000045530 32 1.711 1.000 - - 0.711 - - - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
37. crygm2d3 ENSDARG00000088823 1560 1.705 - - 0.799 - - - - 0.906 - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
38. shisa9 shisa9 35 1.703 1.000 - - - - - - - 0.703
39. fbn1 39 1.688 - 0.807 - - 0.881 - - - - fibrillin 1
40. zgc:86723 zgc:86723 299 1.68 - - 0.728 - - - - 0.952 -
41. si:dkey-29d8.3 ENSDARG00000091879 21 1.679 0.732 0.947 - - - - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
42. zgc:165347 zgc:165347 1358 1.677 - - 0.885 - - - - 0.792 -
43. zgc:162402 zgc:162402 298 1.659 - - 0.739 - - - - 0.920 -
44. mipa ENSDARG00000037285, ENSDARG00000116133 507 1.64 - - 0.766 - - - - 0.874 - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
45. cryba2b ENSDARG00000041925 4329 1.637 - - 0.770 - - - - 0.867 - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
46. cx44.1 cx44.1 799 1.637 - - 0.751 - - - - 0.886 -
47. lim2.4 ENSDARG00000015445 791 1.619 - - 0.726 - - - - 0.893 - lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
48. CABZ01069519.1 CABZ01069519.1 64 1.595 0.749 0.846 - - - - - - -
49. mipb ENSDARG00000013963 753 1.57 - - 0.868 - - - - 0.702 - major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
50. gja3 ENSDARG00000021889, ENSDARG00000116798 49 1.538 - 0.820 - - - - - 0.718 - gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
51. si:dkey-104k17.1 si:dkey-104k17.1 13 1.459 0.749 0.710 - - - - - - -
52. BEND2 BEND2 92 1.415 0.704 0.711 - - - - - - -
53. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 1.000 - - - - - - - -
54. wbscr27 wbscr27 70 1 1.000 - - - - - - - -
55. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
56. si:dkey-57a22.12 si:dkey-57a22.12 23 1 1.000 - - - - - - - -
57. si:dkey-237i9.8 ENSDARG00000103020 3 1 - - 1.000 - - - - - - si:dkey-237i9.8 [Source:ZFIN;Acc:ZDB-GENE-120215-145]
58. AL645691.4 AL645691.4 0 1 1.000 - - - - - - - -
59. Mar-01 Mar-01 176 1 1.000 - - - - - - - -
60. crhr1 ENSDARG00000003989 5 1 - - - - - - - 1.000 - corticotropin releasing hormone receptor 1 [Source:ZFIN;Acc:ZDB-GENE-081231-1]
61. cth1 ENSDARG00000057328 13 1 - - 1.000 - - - - - - cysteine three histidine 1 [Source:ZFIN;Acc:ZDB-GENE-990806-20]
62. CABZ01021454.2 CABZ01021454.2 3 1 - - - - - - - 1.000 -
63. RIMBP2_1 RIMBP2_1 57 1 1.000 - - - - - - - -
64. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1 1.000 - - - - - - - -
65. tctn2 ENSDARG00000035633 84 1 1.000 - - - - - - - - tectonic family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-751]
66. zdhhc18a ENSDARG00000069807 8 1 - - 1.000 - - - - - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
67. si:ch73-379f7.5 si:ch73-379f7.5 1 1 - - - - - - - 1.000 -
68. BIN1 BIN1 11 1 1.000 - - - - - - - -
69. si:dkey-7l6.3 ENSDARG00000094514 146 1 1.000 - - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
70. si:dkey-253d23.9 ENSDARG00000074820 24 1 1.000 - - - - - - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
71. Metazoa_SRP_27 Metazoa_SRP_27 2 1 1.000 - - - - - - - -
72. si:zfos-44h1.1 si:zfos-44h1.1 1 1 - - - - - - - 1.000 -
73. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - 1.000 - - - - - -
74. si:ch1073-284b18.3 si:ch1073-284b18.3 1 1 - - - 1.000 - - - - -
75. CU457819.2 ENSDARG00000105374 8 1 1.000 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
76. gh1 ENSDARG00000038185 1 1 1.000 - - - - - - - - growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
77. otx5 ENSDARG00000043483 282 1 1.000 - - - - - - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
78. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
79. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - 1.000 - - - - - -
80. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - - - - 1.000 - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
81. CABZ01069022.1 ENSDARG00000105692 16 1 - - - - - - - 1.000 - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
82. U1_29 U1_29 0 1 1.000 - - - - - - - -
83. dao.2 ENSDARG00000035603 8 1 - - - 1.000 - - - - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
84. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
85. gnai3 ENSDARG00000030644 29 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
86. ddrgk1 ENSDARG00000037172 14 1 1.000 - - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
87. C18H15orf48 C18H15orf48 3 1 - - - - - - - - 1.000
88. lifra ENSDARG00000098857 11 1 1.000 - - - - - - - - leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
89. si:dkey-17e6.1 si:dkey-17e6.1 1 1 - - 1.000 - - - - - -
90. CABZ01024686.1 CABZ01024686.1 1 1 1.000 - - - - - - - -
91. ATXN1L ENSDARG00000086977 4 1 - - 1.000 - - - - - - ataxin 1-like [Source:ZFIN;Acc:ZDB-GENE-090908-1]
92. rhpn1 ENSDARG00000052454 3 1 1.000 - - - - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
93. zgc:92275 ENSDARG00000034048 9 1 1.000 - - - - - - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
94. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 1.000 - - - - - - - -
95. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
96. or115-14 ENSDARG00000094235 17 1 - - - - - - - 1.000 - odorant receptor, family F, subfamily115, member 14 [Source:ZFIN;Acc:ZDB-GENE-010309-1]
97. pdia2 ENSDARG00000018263 74 1 1.000 - - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
98. scospondin ENSDARG00000067859 4 1 1.000 - - - - - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
99. asb10 ENSDARG00000099461 27 1 - - 1.000 - - - - - - ankyrin repeat and SOCS box containing 10 [Source:ZFIN;Acc:ZDB-GENE-060929-1106]
100. si:ch211-170h2.3 si:ch211-170h2.3 3 1 - - - 1.000 - - - - -

There are 949 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA