Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cnn1a

Gene Name Gene ID Reads Annotation
cnn1a ENSDARG00000017193 6 calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]










Genes with expression patterns similar to cnn1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cnn1a ENSDARG00000017193 6 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
2. si:dkey-84h14.3 si:dkey-84h14.3 3 2 - - 1.000 - - - - 1.000 -
3. crygmxl1 ENSDARG00000018797 7 2 - - 1.000 - - - - 1.000 - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
4. NOX4 3 2 - - - 1.000 - - - - 1.000 NADPH oxidase 4
5. crygm2d7 ENSDARG00000076572, ENSDARG00000116634 229 1.982 - - 1.000 - - - - 0.982 - crystallin, gamma M2d7 [Source:ZFIN;Acc:ZDB-GENE-060918-5]
6. crygm2d9 ENSDARG00000115701 28 1.952 - - 1.000 - - - - 0.952 - crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
7. sdr42e1 ENSDARG00000098838 25 1.947 1.000 - - 0.947 - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
8. sox11a ENSDARG00000077811 25 1.947 1.000 0.947 - - - - - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
9. BEND2_1 BEND2_1 45 1.941 1.000 0.941 - - - - - - -
10. lim2.5 ENSDARG00000041295 56 1.931 - - 1.000 - - - - 0.931 - lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]
11. zgc:165347_1 zgc:165347_1 69 1.908 - - 0.947 - - - - 0.961 -
12. zgc:173652 22 1.906 - 0.947 - - - - - - 0.959 zgc:173652
13. crygm2d1 ENSDARG00000087324 258 1.877 - - 0.969 - - - - 0.908 - crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
14. nrl ENSDARG00000100466 41 1.868 1.000 - - - - - - 0.868 - neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
15. crygm2d16 ENSDARG00000076790 129 1.867 - - 0.916 - - - - 0.951 - crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
16. crygm2d4 ENSDARG00000087164, ENSDARG00000115295 138 1.86 - - 0.927 - - - - 0.933 - crystallin, gamma M2d4 [Source:ZFIN;Acc:ZDB-GENE-060918-3]
17. crygm2d14 ENSDARG00000087301 66 1.858 - - 0.878 - - - - 0.980 - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
18. si:ch211-274p24.3 si:ch211-274p24.3 72 1.846 - 0.877 - - - - - 0.969 -
19. b4galnt3a ENSDARG00000078749 3 1.828 - 0.947 - - 0.881 - - - - beta-1,4-N-acetyl-galactosaminyl transferase 3a [Source:ZFIN;Acc:ZDB-GENE-060503-519]
20. porcnl ENSDARG00000052455 29 1.826 - 0.826 - - - - - 1.000 - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
21. fastkd1 ENSDARG00000056128 141 1.816 1.000 0.816 - - - - - - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
22. crygm2d8 ENSDARG00000116164 698 1.808 - - 0.884 - - - - 0.924 - crystallin, gamma M2d8 [Source:ZFIN;Acc:ZDB-GENE-040718-321]
23. si:dkey-51d8.11 8 1.8 - - - - 0.800 - - 1.000 - si:dkey-51d8.11, transcript variant X6
24. si:ch211-219a15.3 ENSDARG00000087659 12 1.8 1.000 - - - - - - 0.800 - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
25. crygm2d10 ENSDARG00000087765 358 1.775 - - 0.836 - - - - 0.939 - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
26. lctla ENSDARG00000036139, ENSDARG00000116316 32 1.768 - - 1.000 - - - - 0.768 - lactase-like a [Source:ZFIN;Acc:ZDB-GENE-040718-233]
27. BX927369.1 ENSDARG00000105047 21 1.744 1.000 0.744 - - - - - - -
28. si:dkey-78i1.2 si:dkey-78i1.2 15 1.74 - 0.883 - - 0.857 - - - -
29. crygm2d6 ENSDARG00000073874 38 1.73 - - 0.899 - - - - 0.831 - crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
30. si:ch211-212n6.16 si:ch211-212n6.16 314 1.729 - - 0.819 - - - - 0.910 -
31. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 1.728 - - 0.772 - - - - 0.956 - crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
32. crygm2d5 ENSDARG00000069792 207 1.724 - - 0.929 - - - - 0.795 - crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
33. BX927237.2 BX927237.2 16 1.722 - - - 0.722 - - - 1.000 -
34. crygmxl2 ENSDARG00000074001 282 1.72 - - 0.810 - - - - 0.910 - crystallin, gamma MX, like 2 [Source:ZFIN;Acc:ZDB-GENE-050522-401]
35. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1.716 1.000 - 0.716 - - - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
36. si:ch211-244b2.4 ENSDARG00000045530 32 1.711 1.000 - - 0.711 - - - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
37. crygm2d3 ENSDARG00000088823 1560 1.705 - - 0.799 - - - - 0.906 - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
38. shisa9 shisa9 35 1.703 1.000 - - - - - - - 0.703
39. fbn1 39 1.688 - 0.807 - - 0.881 - - - - fibrillin 1
40. zgc:86723 zgc:86723 299 1.68 - - 0.728 - - - - 0.952 -
41. si:dkey-29d8.3 ENSDARG00000091879 21 1.679 0.732 0.947 - - - - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
42. zgc:165347 zgc:165347 1358 1.677 - - 0.885 - - - - 0.792 -
43. zgc:162402 zgc:162402 298 1.659 - - 0.739 - - - - 0.920 -
44. mipa ENSDARG00000037285, ENSDARG00000116133 507 1.64 - - 0.766 - - - - 0.874 - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
45. cx44.1 cx44.1 799 1.637 - - 0.751 - - - - 0.886 -
46. cryba2b ENSDARG00000041925 4329 1.637 - - 0.770 - - - - 0.867 - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
47. lim2.4 ENSDARG00000015445 791 1.619 - - 0.726 - - - - 0.893 - lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
48. CABZ01069519.1 CABZ01069519.1 64 1.595 0.749 0.846 - - - - - - -
49. mipb ENSDARG00000013963 753 1.57 - - 0.868 - - - - 0.702 - major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
50. gja3 ENSDARG00000021889, ENSDARG00000116798 49 1.538 - 0.820 - - - - - 0.718 - gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
51. si:dkey-104k17.1 si:dkey-104k17.1 13 1.459 0.749 0.710 - - - - - - -
52. BEND2 BEND2 92 1.415 0.704 0.711 - - - - - - -
53. ppid ENSDARG00000038835 2 1 - - 1.000 - - - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
54. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 1.000 - - - - - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
55. TRIM14_10 TRIM14_10 9 1 1.000 - - - - - - - -
56. si:ch211-225b11.4 ENSDARG00000093563 42 1 1.000 - - - - - - - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
57. CR392364.1 CR392364.1 1 1 - - - - - - - - 1.000
58. MPP4 MPP4 1 1 1.000 - - - - - - - -
59. lrguk ENSDARG00000069698 5 1 1.000 - - - - - - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
60. SNORA63_2 SNORA63_2 6 1 1.000 - - - - - - - -
61. U1_28 U1_28 1 1 - - - 1.000 - - - - -
62. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1 1.000 - - - - - - - -
63. CU457819.2 ENSDARG00000105374 8 1 1.000 - - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
64. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - 1.000 - - - - -
65. si:dkey-176g4.4 si:dkey-176g4.4 0 1 - - - - - - - 1.000 -
66. tmem179b ENSDARG00000069495 17 1 1.000 - - - - - - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
67. slc47a2 2 1 - - - 1.000 - - - - - solute carrier family 47 (multidrug and toxin extrusion), member 2
68. anpepb ENSDARG00000103878 8 1 - - 1.000 - - - - - - alanyl (membrane) aminopeptidase b [Source:ZFIN;Acc:ZDB-GENE-030131-1253]
69. LRRC71 LRRC71 11 1 1.000 - - - - - - - -
70. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - 1.000 - - - - - -
71. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - 1.000 - - - - -
72. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 1 - - 1.000 - - - - - - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
73. CT027705.3 CT027705.3 9 1 1.000 - - - - - - - -
74. CABZ01070631.1 ENSDARG00000110183 6 1 1.000 - - - - - - - - F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850]
75. SLITRK4 ENSDARG00000079781 54 1 1.000 - - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
76. PCBP3 ENSDARG00000054378 17 1 1.000 - - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
77. CU571333.2 CU571333.2 1 1 - - - - - - - - 1.000
78. si:dkey-46c2.2 si:dkey-46c2.2 2 1 - - 1.000 - - - - - -
79. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - - - 1.000 - - - - -
80. CU326366.2 ENSDARG00000068593 11 1 1.000 - - - - - - - -
81. KLHDC8A ENSDARG00000061000 13 1 1.000 - - - - - - - - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
82. GMEB2 ENSDARG00000093240 6 1 - - - - - - - 1.000 - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
83. VDAC3 ENSDARG00000003695 34 1 1.000 - - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
84. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 1 1.000 - - - - - - - - si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
85. rag2 ENSDARG00000052121 15 1 1.000 - - - - - - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
86. CABZ01087549.1 CABZ01087549.1 108 1 1.000 - - - - - - - -
87. lox lox 7 1 - - 1.000 - - - - - -
88. CMA1_8 CMA1_8 10 1 - - 1.000 - - - - - -
89. tdrd1 ENSDARG00000007465, ENSDARG00000109298 17 1 1.000 - - - - - - - - tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070803-1]
90. cryabb ENSDARG00000101380, ENSDARG00000109545 8 1 - - - - - - - - 1.000 crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
91. EVI5L ENSDARG00000052766 8 1 1.000 - - - - - - - - ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
92. si:ch211-264e16.2 ENSDARG00000094415 4 1 - - - 1.000 - - - - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
93. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - - - - 1.000 - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
94. ydjc ENSDARG00000062655 5 1 - - - - - - - 1.000 - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
95. vwc2 ENSDARG00000076495 22 1 1.000 - - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
96. tmprss4b ENSDARG00000012860 6 1 - - 1.000 - - - - - - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
97. gnai3 ENSDARG00000030644 29 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
98. aqp10b ENSDARG00000058678 1 1 - - - 1.000 - - - - - aquaporin 10b [Source:ZFIN;Acc:ZDB-GENE-060503-57]
99. QDPR QDPR 11 1 1.000 - - - - - - - -
100. U1_29 U1_29 0 1 1.000 - - - - - - - -

There are 949 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA