Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cnih4

Gene Name Gene ID Reads Annotation
cnih4 ENSDARG00000087759 3937 cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]










Genes with expression patterns similar to cnih4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cnih4 ENSDARG00000087759 3937 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
2. CNDP1 CNDP1 6456 2.481 0.738 0.769 - - - - - - 0.974
3. AP3B1 2363 2.381 0.916 0.714 - - - 0.751 - - - adaptor related protein complex 3 beta 1 subunit
4. pgrmc1 ENSDARG00000054172 5423 2.352 0.929 0.719 - - - - 0.704 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
5. mier1b ENSDARG00000001447 1680 1.94 0.951 - - - - - - - 0.989 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
6. ubqln4 ENSDARG00000052975 6453 1.804 0.821 - - - - - - - 0.983 ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
7. pfdn4 ENSDARG00000061228 8266 1.793 0.821 - - - - - - - 0.972 prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
8. MIA ENSDARG00000052437, ENSDARG00000116215 1220 1.762 0.957 0.805 - - - - - - - MIA SH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-081022-66]
9. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 1.758 - 0.886 - - - - 0.872 - - myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
10. selj 884 1.756 0.944 - - - - - 0.812 - - selenoprotein J
11. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.731 - 0.783 - - - - - - 0.948 coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
12. lama5 ENSDARG00000058543 2782 1.723 0.940 0.783 - - - - - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
13. ctsf ENSDARG00000063095 4564 1.721 0.945 - - - - - 0.776 - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
14. pgm1 ENSDARG00000013561 11984 1.719 0.916 0.803 - - - - - - - phosphoglucomutase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1245]
15. atp5mf ENSDARG00000037867 11052 1.717 0.743 - - - - - - - 0.974 ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
16. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.709 - - - - - - 0.722 - 0.987 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
17. mtmr9 ENSDARG00000015860 1339 1.702 - - - - - - 0.716 - 0.986 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
18. snrpd1 ENSDARG00000011648 8615 1.682 - 0.707 - - - - - - 0.975 small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
19. TOM1L2 ENSDARG00000056394 793 1.682 0.950 - - - - - 0.732 - - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
20. tmem258 ENSDARG00000078785 9578 1.676 0.830 0.846 - - - - - - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
21. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.661 0.862 - - - - - 0.799 - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
22. tbc1d12b ENSDARG00000073771 787 1.652 0.946 - - - - - - 0.706 - TBC1 domain family, member 12b [Source:ZFIN;Acc:ZDB-GENE-121214-108]
23. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.646 - 0.744 - - - 0.902 - - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
24. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.644 0.836 0.808 - - - - - - - dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
25. ssr2 ENSDARG00000005230 31940 1.64 0.892 0.748 - - - - - - - signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
26. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 1.639 0.930 0.709 - - - - - - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
27. CABZ01080098.1 ENSDARG00000110680 10942 1.637 0.926 0.711 - - - - - - -
28. aim1a 2981 1.634 0.922 0.712 - - - - - - - crystallin beta-gamma domain containing 1a, transcript variant X1
29. si:ch211-214j24.10 ENSDARG00000045847 5145 1.628 0.862 0.766 - - - - - - - si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
30. naga ENSDARG00000099313 2483 1.626 0.916 0.710 - - - - - - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
31. si:ch211-166a6.5 ENSDARG00000079745 11111 1.622 0.864 0.758 - - - - - - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
32. cbx5 ENSDARG00000061187 24026 1.621 - - - - - - 0.737 - 0.884 chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
33. mcm2 ENSDARG00000102798 8148 1.62 0.906 - - - - - 0.714 - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
34. slc38a7 ENSDARG00000012002 2219 1.617 0.916 0.701 - - - - - - - solute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
35. wipi1 ENSDARG00000040657 2732 1.616 0.897 0.719 - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
36. RABGAP1L ENSDARG00000061757 1967 1.609 0.890 - - - - - 0.719 - - RAB GTPase activating protein 1-like [Source:ZFIN;Acc:ZDB-GENE-050208-389]
37. clint1a ENSDARG00000025535 4965 1.603 0.828 - - - - - 0.775 - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
38. he2 945 1.596 - 0.849 - - - 0.747 - - - hatching enzyme 2
39. gstp1 ENSDARG00000104068 12698 1.595 0.816 0.779 - - - - - - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
40. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.584 0.824 0.760 - - - - - - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
41. itih2 ENSDARG00000045516 1893 1.572 0.862 0.710 - - - - - - - inter-alpha-trypsin inhibitor heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1942]
42. CU633744.1 CU633744.1 2074 1.571 - 0.824 - - - - 0.747 - -
43. helz ENSDARG00000030560 3259 1.568 - - - - - 0.841 0.727 - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
44. arpc4l ENSDARG00000058225 10107 1.567 0.816 0.751 - - - - - - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
45. chmp5b ENSDARG00000103718 1608 1.566 - - - - - - 0.864 0.702 - charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
46. FP236813.1 FP236813.1 1842 1.56 - - - - - 0.753 0.807 - -
47. pkn1 pkn1 1510 1.56 - 0.781 - - - 0.779 - - -
48. samd10a ENSDARG00000079978, ENSDARG00000112138 430 1.551 - - - - - 0.809 0.742 - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
49. atp6v1ab ENSDARG00000076318, ENSDARG00000112815 3858 1.549 0.800 0.749 - - - - - - - ATPase H+ transporting V1 subunit Ab [Source:ZFIN;Acc:ZDB-GENE-030131-9529]
50. tax1bp3 ENSDARG00000059177 4324 1.549 - 0.712 - - - 0.837 - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
51. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.535 - 0.721 - - - - 0.814 - - glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
52. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.529 - 0.828 - - - - 0.701 - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
53. dusp1 ENSDARG00000100515 2338 1.507 - 0.761 - - - 0.746 - - - dual specificity phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2018]
54. EMILIN3 1347 1.498 - 0.728 - - - - 0.770 - - elastin microfibril interfacer 3
55. surf4l ENSDARG00000035131 3648 1.494 - 0.724 - - - - 0.770 - - surfeit gene 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-172]
56. vps4b ENSDARG00000069175 1922 1.487 - - - - - 0.723 0.764 - - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
57. pdia3 ENSDARG00000102640 7239 1.485 - - - - - 0.763 - 0.722 - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
58. suco ENSDARG00000016532 1609 1.48 - 0.768 - - - 0.712 - - - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
59. XCR1_1 XCR1_1 187 1.471 - 0.718 - - - - 0.753 - -
60. lamp2 ENSDARG00000014914 5035 1.468 - 0.743 - - - - 0.725 - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
61. eps8l1 1598 1.463 - 0.723 - - - 0.740 - - - eps8-like1, transcript variant X3
62. pef1 ENSDARG00000023989 3013 1.461 - 0.718 - - - - 0.743 - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
63. stam2 ENSDARG00000005318 2980 1.442 - 0.709 - - - - 0.733 - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
64. UBC ENSDARG00000102632 39051 1.41 - - - - - - 0.705 - 0.705 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
65. zgc:77816 zgc:77816 800 0.994 - - - - - - - - 0.994
66. hoxa10b ENSDARG00000031337 3992 0.99 - - - - - - - - 0.990 homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
67. naa15a ENSDARG00000003213 5889 0.988 - - - - - - - - 0.988 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
68. gltscr1 gltscr1 1487 0.987 - - - - - - - - 0.987
69. nup155 ENSDARG00000001777 3417 0.987 - - - - - - - - 0.987 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
70. zgc:162967 zgc:162967 2132 0.987 - - - - - - - - 0.987
71. agpat9 agpat9 938 0.987 - - - - - - - - 0.987
72. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.987 - - - - - - - - 0.987 carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
73. SPDL1 ENSDARG00000103996, ENSDARG00000109617 1473 0.987 - - - - - - - - 0.987 spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]
74. cdk5r1b ENSDARG00000045087 2075 0.987 - - - - - - - - 0.987 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
75. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.987 - - - - - - - - 0.987 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
76. TRIM65 ENSDARG00000077098 991 0.987 - - - - - - - - 0.987 tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
77. C24H7orf50 1417 0.987 - - - - - - - - 0.987 chromosome 24 C7orf50 homolog, transcript variant X2
78. tsen2 ENSDARG00000091851 1467 0.987 - - - - - - - - 0.987 TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
79. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.987 - - - - - - - - 0.987 aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
80. jam2b ENSDARG00000079071 1031 0.987 - - - - - - - - 0.987 junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
81. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.987 - - - - - - - - 0.987 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
82. polr3k ENSDARG00000037835 1552 0.987 - - - - - - - - 0.987 polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
83. spag1a ENSDARG00000004017 1140 0.987 - - - - - - - - 0.987 sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
84. NDST1 NDST1 1584 0.987 - - - - - - - - 0.987
85. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 0.987 - - - - - - - - 0.987 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
86. smyd5 ENSDARG00000071669 1194 0.987 - - - - - - - - 0.987 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
87. jam3a ENSDARG00000114589 630 0.987 - - - - - - - - 0.987 junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
88. acbd6 ENSDARG00000039456 2355 0.987 - - - - - - - - 0.987 acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
89. tmed7 ENSDARG00000046022 2435 0.986 - - - - - - - - 0.986 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
90. hddc3 ENSDARG00000020473 2814 0.986 - - - - - - - - 0.986 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
91. NRD1 NRD1 3486 0.986 - - - - - - - - 0.986
92. gata3 ENSDARG00000016526 1857 0.986 - - - - - - - - 0.986 GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
93. BX957337.1 BX957337.1 1685 0.986 - - - - - - - - 0.986
94. foxp2 ENSDARG00000005453 1504 0.986 - - - - - - - - 0.986 forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
95. prpf39 ENSDARG00000100209 3721 0.986 - - - - - - - - 0.986 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
96. BX296557.2 BX296557.2 1083 0.986 - - - - - - - - 0.986
97. serpinb1 ENSDARG00000055416 1320 0.986 - - - - - - - - 0.986 serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
98. cnrip1a ENSDARG00000091683 1491 0.986 - - - - - - - - 0.986 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
99. nup98 ENSDARG00000074955 3998 0.985 - - - - - - - - 0.985 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
100. ash1l ENSDARG00000070981 2520 0.985 - - - - - - - - 0.985 ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]

There are 989 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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