Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for cmss1

Gene Name Gene ID Reads Annotation
cmss1 ENSDARG00000004727, ENSDARG00000112579 830 cms1 ribosomal small subunit homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041010-146]










Genes with expression patterns similar to cmss1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cmss1 ENSDARG00000004727, ENSDARG00000112579 830 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cms1 ribosomal small subunit homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041010-146]
2. ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 1.558 0.779 0.779 - - - - - - - actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]
3. rwdd1 ENSDARG00000015930 2380 1.526 - 0.732 - - - - 0.794 - - RWD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-270]
4. znf106a ENSDARG00000016651 6049 1.523 - 0.722 - - - - 0.801 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
5. C9H2orf40 C9H2orf40 212 1.514 - - - 0.728 - 0.786 - - -
6. grsf1 ENSDARG00000053021 2752 1.506 - 0.715 - - - - 0.791 - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
7. zgc:73324 zgc:73324 989 1.496 - 0.764 - - - - 0.732 - -
8. ccdc58 ENSDARG00000045351 972 1.49 - 0.732 - - - - 0.758 - - coiled-coil domain containing 58 [Source:ZFIN;Acc:ZDB-GENE-040426-1780]
9. thbs3a ENSDARG00000077641 631 1.483 - 0.750 - - - - 0.733 - - thrombospondin 3a [Source:ZFIN;Acc:ZDB-GENE-020708-3]
10. WDR83OS ENSDARG00000025554 7117 1.466 - - - 0.734 - - 0.732 - - WD repeat domain 83 opposite strand [Source:ZFIN;Acc:ZDB-GENE-040426-1674]
11. polr1d ENSDARG00000037570 860 1.419 - - - - - - 0.710 0.709 - RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
12. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.418 0.706 0.712 - - - - - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
13. C1QBP ENSDARG00000039887 11186 0.902 - - - - - - 0.902 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
14. camk2a ENSDARG00000053617 950 0.901 - - - - - - 0.901 - - calcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
15. dlk2 ENSDARG00000076247 387 0.884 - - - - - - 0.884 - - delta-like 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081107-4]
16. CR383676.3 CR383676.3 2650 0.882 - 0.882 - - - - - - -
17. grem2 grem2 743 0.881 - - - - - - 0.881 - -
18. angptl7 ENSDARG00000027582, ENSDARG00000110344 1574 0.878 - - - - - - 0.878 - - angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
19. crabp2a_1 ENSDARG00000073978 888 0.876 - - - - - - 0.876 - - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
20. pcmt ENSDARG00000015201 5132 0.874 - - - - - - 0.874 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
21. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 0.868 - - - - - - 0.868 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
22. si:ch211-85n16.3 ENSDARG00000096346 1095 0.867 - - - - - - 0.867 - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
23. ndufa9 ndufa9 8846 0.866 - - - - - - 0.866 - -
24. C5H11orf88 C5H11orf88 280 0.865 - - - - - 0.865 - - -
25. mdh2 ENSDARG00000043371 14485 0.865 - - - - - - 0.865 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
26. cdk5rap3 ENSDARG00000045092, ENSDARG00000115530 717 0.863 - 0.863 - - - - - - - CDK5 regulatory subunit associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040625-90]
27. cct3 ENSDARG00000016173 15869 0.863 - - - - - - 0.863 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
28. col4a2 ENSDARG00000104110 947 0.86 - - - - - - 0.860 - - collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]
29. ccdc80 ENSDARG00000000002 1284 0.858 - - - - - - 0.858 - - coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
30. pmt ENSDARG00000100482 228 0.857 - - - - - 0.857 - - - phosphoethanolamine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060929-740]
31. si:dkey-11e23.5 si:dkey-11e23.5 3464 0.857 - 0.857 - - - - - - -
32. lrrc8c ENSDARG00000099911 1499 0.857 - - - - - - 0.857 - - leucine rich repeat containing 8 VRAC subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2965]
33. xrn2 ENSDARG00000101900 2875 0.856 - 0.856 - - - - - - - 5'-3' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2874]
34. alpk2 ENSDARG00000079637 1483 0.854 - - - - - - 0.854 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
35. pdcd4a ENSDARG00000021702 7293 0.853 - - - - - - 0.853 - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
36. CU633479.5 ENSDARG00000114818 1815 0.853 - - - - - - 0.853 - -
37. exosc9 ENSDARG00000006392 906 0.853 - 0.853 - - - - - - - exosome component 9 [Source:ZFIN;Acc:ZDB-GENE-041010-180]
38. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 0.852 - - - - - 0.852 - - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
39. trim101 ENSDARG00000018264 827 0.848 - - - - - - 0.848 - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
40. si:ch211-156j16.1 ENSDARG00000092035 7441 0.848 - - - - - - 0.848 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
41. zgc:158296 ENSDARG00000070923 3935 0.846 - - - - - - 0.846 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
42. LEPROTL1 ENSDARG00000104871 3019 0.845 - 0.845 - - - - - - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
43. txlnbb ENSDARG00000076241 6396 0.845 - - - - - - 0.845 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
44. clec14a ENSDARG00000103533 718 0.844 - - - - - - 0.844 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
45. egln1 egln1 3746 0.843 - - - - - - 0.843 - -
46. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 0.843 - - - - - - 0.843 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
47. hsp90aa1.1 ENSDARG00000010478 47784 0.842 - - - - - - 0.842 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
48. nmd3 ENSDARG00000015676 303 0.842 - - - - - - 0.842 - - NMD3 ribosome export adaptor [Source:ZFIN;Acc:ZDB-GENE-050320-149]
49. mt-nd5 ENSDARG00000063921 21268 0.841 - - - - - - 0.841 - - NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
50. ntmt1 ENSDARG00000022399 5779 0.841 - - - - - - 0.841 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
51. cilp ENSDARG00000053362 1429 0.84 - - - - - - 0.840 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
52. bcl2l13 ENSDARG00000062370, ENSDARG00000111116 3206 0.84 - - - - - - 0.840 - - BCL2 like 13 [Source:ZFIN;Acc:ZDB-GENE-050419-215]
53. COMP 2018 0.839 - - - - - - 0.839 - - cartilage oligomeric matrix protein, transcript variant X1
54. fitm1 ENSDARG00000056464 1759 0.839 - - - - - - 0.839 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
55. cap2 ENSDARG00000104478 3266 0.838 - - - - - - 0.838 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
56. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 0.837 - - - - - - 0.837 - - actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
57. zgc:92518 ENSDARG00000016343 3837 0.837 - - - - - - 0.837 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
58. lama2 ENSDARG00000099390 24734 0.837 - - - - - - 0.837 - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
59. mrpl28 ENSDARG00000057805, ENSDARG00000109307, ENSDARG00000115867 1325 0.836 - - - - - - 0.836 - - mitochondrial ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-050522-113]
60. DIDO1 ENSDARG00000057940 312 0.836 - - - 0.836 - - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
61. parp16 ENSDARG00000018593 873 0.836 - - - 0.836 - - - - - poly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
62. dnase2 ENSDARG00000073893 141 0.835 - - - - - 0.835 - - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
63. sod2 ENSDARG00000042644 1382 0.834 - - - - - - 0.834 - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
64. asb2a asb2a 845 0.833 - - - - - - 0.833 - -
65. prosc 925 0.833 - - - - - 0.833 - - - pyridoxal phosphate binding protein, transcript variant X1
66. dcun1d1 ENSDARG00000099642 2043 0.833 - 0.833 - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
67. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 0.831 - 0.831 - - - - - - - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
68. TPC3 TPC3 416 0.831 - - - - - 0.831 - - -
69. FSD2 518 0.831 - - - - - - 0.831 - - fibronectin type III and SPRY domain containing 2
70. myod1 ENSDARG00000030110 6019 0.83 - - - - - - 0.830 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
71. park7 ENSDARG00000116835 1229 0.83 - - - - - - 0.830 - - parkinson protein 7 [Source:ZFIN;Acc:ZDB-GENE-041010-5]
72. eif2s1b ENSDARG00000052178 11961 0.828 - - - - - - 0.828 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
73. PTGES3L PTGES3L 4801 0.828 - - - - - - 0.828 - -
74. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 0.828 - - - - - - 0.828 - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
75. sar1ab ENSDARG00000033320 3984 0.827 - - - - - - 0.827 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
76. PDPR ENSDARG00000103288 711 0.827 - - - - - - 0.827 - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
77. timm8b ENSDARG00000055708 7291 0.827 - - - - - - 0.827 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
78. rrp12 ENSDARG00000022410 2236 0.826 - - - - - - 0.826 - - ribosomal RNA processing 12 homolog [Source:ZFIN;Acc:ZDB-GENE-050706-182]
79. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 0.825 - - - - - - 0.825 - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
80. CNST CNST 540 0.825 - - - - - - 0.825 - -
81. ppp1r14bb ENSDARG00000030161 2349 0.825 - - - - - - 0.825 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
82. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 0.825 - - - - - - 0.825 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
83. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 0.824 - - - - - - 0.824 - - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
84. si:ch211-114n24.7 si:ch211-114n24.7 2544 0.824 - - - - - - 0.824 - -
85. si:ch211-28p3.4 ENSDARG00000091009 280 0.824 - - - - - - 0.824 - - si:ch211-28p3.4 [Source:ZFIN;Acc:ZDB-GENE-130603-54]
86. emc6 ENSDARG00000035282 4981 0.824 - 0.824 - - - - - - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
87. col4a1 ENSDARG00000055009 3083 0.824 - - - - - - 0.824 - - collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
88. tufm ENSDARG00000104173 9292 0.823 - - - - - - 0.823 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
89. ms4a17a.14 829 0.823 - - - - - - 0.823 - - membrane-spanning 4-domains, subfamily A, member 17A.14
90. dcaf6 ENSDARG00000078311 1118 0.823 - 0.823 - - - - - - - ddb1 and cul4 associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-090206-2]
91. polr3e ENSDARG00000037358 1864 0.823 - 0.823 - - - - - - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
92. kdm6al ENSDARG00000059794 545 0.823 - - - 0.823 - - - - - lysine (K)-specific demethylase 6A, like [Source:ZFIN;Acc:ZDB-GENE-070112-2002]
93. rp42-pen rp42-pen 3395 0.821 - - - - - - 0.821 - -
94. zgc:112175 ENSDARG00000037810 402 0.821 - - - - - - 0.821 - - zgc:112175 [Source:ZFIN;Acc:ZDB-GENE-050417-220]
95. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 0.821 - - - - - - 0.821 - - cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
96. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 0.821 - - - - - - 0.821 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
97. sgcd ENSDARG00000098573 4980 0.82 - - - - - - 0.820 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
98. ATP5J 343 0.82 - - - - - - 0.820 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
99. bmpr1bb ENSDARG00000102742 1036 0.819 - - - - - - 0.819 - - bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
100. cacna2d1a ENSDARG00000014804 1924 0.819 - - - - - - 0.819 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]

There are 747 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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