Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cmn

Gene Name Gene ID Reads Annotation
cmn ENSDARG00000055527 14039 calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]










Genes with expression patterns similar to cmn

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cmn ENSDARG00000055527 14039 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
2. col9a2 ENSDARG00000024492 20234 3.45 0.978 0.978 - - - 0.739 - - 0.755 procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
3. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 3.365 0.979 0.729 - - - 0.839 - - 0.818 zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
4. col9a1 col9a1 34481 3.037 0.849 - 0.721 0.709 - 0.758 - - -
5. col9a3 ENSDARG00000037845 6564 2.531 0.950 - - - - 0.822 - - 0.759 collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
6. col2a1a ENSDARG00000069093, ENSDARG00000111202 50276 2.506 0.950 - - 0.726 - 0.830 - - - collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
7. CABZ01074435.1 CABZ01074435.1 4551 2.359 0.774 - 0.788 0.797 - - - - -
8. nup133 ENSDARG00000010078 2373 1.926 - 0.977 - - - - 0.949 - - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
9. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 1.891 - - - - 0.995 - 0.896 - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
10. smtnl1 ENSDARG00000041257 7410 1.852 0.862 0.990 - - - - - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
11. cox7c ENSDARG00000104537 12169 1.813 - 0.979 - - - - - - 0.834 cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
12. murca murca 6614 1.794 0.808 0.986 - - - - - - -
13. CABZ01044297.1 CABZ01044297.1 2015 1.791 0.957 - - - - 0.834 - - -
14. si:dkeyp-12a9.5 3058 1.791 0.957 - - - - 0.834 - - - si:dkeyp-12a9.5
15. epyc ENSDARG00000056950 7783 1.773 0.954 - - - - 0.819 - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
16. nexn ENSDARG00000057317 10972 1.769 0.796 0.973 - - - - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
17. loxl3b ENSDARG00000039563 1657 1.767 0.811 - - - - - 0.956 - - lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]
18. rplp0 ENSDARG00000051783 88740 1.764 - 0.788 - - 0.976 - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
19. pgam2 ENSDARG00000057571 23387 1.759 0.783 - - - - - 0.976 - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
20. PAQR4 PAQR4 2150 1.751 0.933 - - - - 0.818 - - -
21. p4ha1b ENSDARG00000071082, ENSDARG00000112774 3198 1.74 - - - - - - 0.951 - 0.789 prolyl 4-hydroxylase, alpha polypeptide I b [Source:ZFIN;Acc:ZDB-GENE-030131-4089]
22. mef2ca ENSDARG00000029764 18547 1.737 - - 0.772 - - - 0.965 - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
23. ntla ntla 926 1.737 0.913 - - - - 0.824 - - -
24. CABZ01079764.1 CABZ01079764.1 12103 1.728 0.894 - - - - 0.834 - - -
25. si:dkeyp-118a3.2 ENSDARG00000086957 2106 1.724 0.937 - - - - 0.787 - - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
26. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.715 - - - - - - 0.959 - 0.756 histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
27. krt18 ENSDARG00000018404, ENSDARG00000109528 43707 1.707 0.733 - - - - - 0.974 - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
28. zgc:194470 zgc:194470 210 1.701 0.913 - - - - 0.788 - - -
29. ntd5 ENSDARG00000040944 4988 1.694 0.956 - - - - 0.738 - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
30. pi15a ENSDARG00000045378 2361 1.667 0.874 - - - - 0.793 - - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
31. col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 1.654 0.952 0.702 - - - - - - - collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
32. scel ENSDARG00000034677, ENSDARG00000110476, ENSDARG00000111222, ENSDARG00000116782 3270 1.644 - - - - - - 0.943 - 0.701 sciellin [Source:ZFIN;Acc:ZDB-GENE-030616-15]
33. plod2 ENSDARG00000011821 1656 1.639 0.887 - - - - 0.752 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
34. tgfbi ENSDARG00000071586 17779 1.636 0.897 - - - - 0.739 - - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
35. shha ENSDARG00000068567, ENSDARG00000111447 1497 1.63 0.856 - - - - 0.774 - - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
36. acana ENSDARG00000035891 118 1.629 0.850 - - - - 0.779 - - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
37. CU469518.1 CU469518.1 214 1.628 0.850 - - - - 0.778 - - -
38. COBLL1_1 COBLL1_1 787 1.614 0.801 - - - - 0.813 - - -
39. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 1.607 0.768 - 0.839 - - - - - - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
40. tmem38a ENSDARG00000024047 41883 1.605 0.763 0.842 - - - - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
41. BX842614.2 BX842614.2 799 1.598 0.782 - - - - 0.816 - - -
42. chad ENSDARG00000045071 903 1.597 0.767 - - - - 0.830 - - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
43. susd5 ENSDARG00000088277 439 1.584 0.824 - - - - 0.760 - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
44. tnnt3a ENSDARG00000030270 112506 1.58 0.729 0.851 - - - - - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
45. tgm2l ENSDARG00000093381 218 1.576 0.816 - - - - 0.760 - - - transglutaminase 2, like [Source:ZFIN;Acc:ZDB-GENE-050420-97]
46. ucmab ENSDARG00000005485 1808 1.576 0.773 - - - - 0.803 - - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]
47. IGSF10 ENSDARG00000077497 317 1.541 0.817 - - - - 0.724 - - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
48. si:dkey-6n6.1 ENSDARG00000062487 222 1.54 0.776 - - - - 0.764 - - - si:dkey-6n6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-80]
49. myl10 ENSDARG00000062592 101207 1.533 0.758 - 0.775 - - - - - - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
50. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.517 0.705 - - - - 0.812 - - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
51. tnnt2c ENSDARG00000032242 28801 1.501 0.752 - - - - - - - 0.749 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
52. pygma ENSDARG00000055518 15972 1.486 0.761 - - - - 0.725 - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
53. zgc:66286 zgc:66286 118947 1.472 0.767 - 0.705 - - - - - -
54. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 1.471 - - 0.707 0.764 - - - - - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
55. PTGES3L PTGES3L 4801 1.47 0.762 - 0.708 - - - - - -
56. eng1a eng1a 484 1.467 0.737 - - - - 0.730 - - -
57. plcd4a ENSDARG00000057975 241 1.451 0.737 - - - - 0.714 - - - phospholipase C, delta 4a [Source:ZFIN;Acc:ZDB-GENE-050208-654]
58. SLC3A2_1 SLC3A2_1 358 1.45 0.712 - - - - 0.738 - - -
59. extl3 ENSDARG00000026811 4815 0.998 - - - - 0.998 - - - - exostosin-like glycosyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041124-2]
60. CABZ01080098.1 ENSDARG00000110680 10942 0.998 - - - - 0.998 - - - -
61. ddx21 ENSDARG00000063626 6695 0.998 - - - - 0.998 - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
62. CU862021.1 CU862021.1 5925 0.998 - - - - 0.998 - - - -
63. las1l ENSDARG00000062457, ENSDARG00000114475 3987 0.997 - - - - 0.997 - - - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
64. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 0.997 - - - - 0.997 - - - - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
65. BX088708.1 BX088708.1 6503 0.997 - - - - 0.997 - - - -
66. RFC4 ENSDARG00000042458 3694 0.997 - - - - 0.997 - - - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
67. ints12 ENSDARG00000091678 3261 0.997 - - - - 0.997 - - - - integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
68. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 0.997 - - - - 0.997 - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
69. rap1a rap1a 5654 0.997 - - - - 0.997 - - - -
70. sesn3 ENSDARG00000015822 5328 0.997 - - - - 0.997 - - - - sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
71. FP102272.1 FP102272.1 9473 0.997 - - - - 0.997 - - - -
72. si:ch73-21g5.7 ENSDARG00000093156 9412 0.996 - - - - 0.996 - - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
73. tox ENSDARG00000032317 9126 0.995 - - - - 0.995 - - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
74. hif1al ENSDARG00000100826 18627 0.995 - - - - 0.995 - - - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
75. ppm1da ENSDARG00000009273 7713 0.993 - - - - 0.993 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
76. ddx39ab ENSDARG00000015111 11619 0.993 - - - - 0.993 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
77. strap ENSDARG00000007405 6426 0.993 - - - - 0.993 - - - - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
78. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.992 - 0.992 - - - - - - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
79. rpl38 ENSDARG00000006413 59590 0.992 - - - - 0.992 - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
80. rpsa ENSDARG00000019181 93440 0.991 - - - - 0.991 - - - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
81. fbl ENSDARG00000053912 5891 0.986 - 0.986 - - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
82. hnrnph1l ENSDARG00000005551 8727 0.985 - 0.985 - - - - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
83. atp1b3b ENSDARG00000042837 5163 0.984 - 0.984 - - - - - - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
84. riok3 ENSDARG00000042751 3163 0.983 - 0.983 - - - - - - - RIO kinase 3 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-133]
85. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 0.982 - 0.982 - - - - - - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
86. lims2 ENSDARG00000014976 1248 0.982 - 0.982 - - - - - - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
87. icn ENSDARG00000009978 85647 0.982 - - - - 0.982 - - - - ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
88. med10 ENSDARG00000070623 5134 0.982 - 0.982 - - - - - - - mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]
89. surf6 ENSDARG00000035427 1695 0.982 - 0.982 - - - - - - - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
90. ndufa7 ENSDARG00000036684 6051 0.981 - 0.981 - - - - - - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
91. cnbpb ENSDARG00000070922 14606 0.981 - 0.981 - - - - - - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
92. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 0.98 - 0.980 - - - - - - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
93. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 0.98 - 0.980 - - - - - - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
94. CABZ01081490.1 ENSDARG00000111653 11892 0.98 - 0.980 - - - - - - -
95. eif4a3 ENSDARG00000102978 16162 0.98 - 0.980 - - - - - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
96. dyrk1b ENSDARG00000070187 2777 0.979 - 0.979 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
97. mbnl2 ENSDARG00000018460 3328 0.979 - 0.979 - - - - - - - muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
98. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 0.979 - 0.979 - - - - - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
99. psmb4 ENSDARG00000054696 8100 0.979 - 0.979 - - - - - - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
100. SERP1 ENSDARG00000076223 2528 0.979 - 0.979 - - - - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]

There are 456 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA