Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for cmc1

Gene Name Gene ID Reads Annotation
cmc1 ENSDARG00000103670 1197 C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]










Genes with expression patterns similar to cmc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. cmc1 ENSDARG00000103670 1197 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
2. itpkb ENSDARG00000010059 2352 2.342 0.712 0.875 - 0.755 - - - - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
3. slc30a1a ENSDARG00000005463 1011 2.306 - 0.816 - 0.784 - 0.706 - - - solute carrier family 30 (zinc transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1840]
4. lamtor3 ENSDARG00000057075 2282 2.284 - 0.760 - - - 0.740 0.784 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:ZFIN;Acc:ZDB-GENE-050522-345]
5. aqp12 ENSDARG00000043279 1881 2.282 0.708 0.749 - - - 0.825 - - - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
6. ENSDARG00000086641 ENSDARG00000086641 1819 1.689 - 0.898 - - - 0.791 - - -
7. tmem184c ENSDARG00000078789, ENSDARG00000111570 395 1.675 - - - 0.901 - 0.774 - - - transmembrane protein 184C [Source:ZFIN;Acc:ZDB-GENE-090312-89]
8. ubald1b ENSDARG00000020976 1162 1.67 - 0.859 - - - - 0.811 - - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
9. six2a ENSDARG00000058004, ENSDARG00000115214 414 1.663 - 0.771 - 0.892 - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
10. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 1.657 - - - 0.906 - - - 0.751 - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
11. ddx31 ENSDARG00000035507 167 1.654 - - - 0.910 - 0.744 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
12. nudt5 ENSDARG00000078073 779 1.643 - 0.889 - - - - - 0.754 - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
13. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 1.638 - 0.781 - 0.857 - - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
14. eva1a ENSDARG00000061405 896 1.638 - 0.912 - 0.726 - - - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
15. wnt7aa ENSDARG00000044827 645 1.638 - 0.779 - 0.859 - - - - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
16. Mar-06 Mar-06 953 1.635 - - - 0.819 - 0.816 - - -
17. adh8b ENSDARG00000024278, ENSDARG00000116820 8008 1.614 0.722 0.892 - - - - - - - alcohol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-030529-2]
18. sult2st2 ENSDARG00000103785 370 1.605 - 0.871 - - - 0.734 - - - sulfotransferase family 2, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061117-5]
19. FRRS1_1 FRRS1_1 831 1.604 - 0.783 - 0.821 - - - - -
20. f7 ENSDARG00000034862 405 1.6 - 0.819 - - - 0.781 - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
21. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.598 - 0.807 - 0.791 - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
22. dcun1d2 dcun1d2 1721 1.598 - 0.795 - - - 0.803 - - -
23. rabgef1 ENSDARG00000014430 1176 1.597 - - - 0.897 - - 0.700 - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
24. slc48a1b ENSDARG00000026109 1427 1.595 - 0.814 - - - 0.781 - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
25. rhbg ENSDARG00000009018 1131 1.592 - 0.878 - - - 0.714 - - - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
26. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.591 - 0.805 - - - - 0.786 - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
27. prkar1aa ENSDARG00000076128 6565 1.583 - 0.777 - - - - 0.806 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
28. zgc:174268 ENSDARG00000076807 250 1.582 - - - 0.815 - - - 0.767 - zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
29. AGAP3 ENSDARG00000087822 4128 1.578 - 0.834 - - - - 0.744 - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-110927-1]
30. man2b1 ENSDARG00000001897 1042 1.577 - 0.865 - - - 0.712 - - - mannosidase, alpha, class 2B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-52]
31. phyhd1 ENSDARG00000029905 1394 1.575 - 0.826 - - - - 0.749 - - phytanoyl-CoA dioxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-159]
32. ormdl2 ENSDARG00000058022 1146 1.571 - 0.748 - 0.823 - - - - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
33. prelid1a ENSDARG00000098671 4745 1.568 - 0.802 - - - 0.766 - - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
34. c8a ENSDARG00000039516 495 1.567 - 0.823 - - - 0.744 - - - complement component 8, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040801-239]
35. elp4 ENSDARG00000008852 253 1.565 - - - 0.816 - - - 0.749 - elongator acetyltransferase complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-114]
36. sepw1 17630 1.561 0.792 - - - - - 0.769 - - selenoprotein W, 1
37. CR381544.1 ENSDARG00000088187 821 1.558 - - - 0.831 - 0.727 - - -
38. crfb17 511 1.555 0.805 - - - - - - 0.750 - cytokine receptor family member B17
39. pef1 ENSDARG00000023989 3013 1.553 0.709 - - 0.844 - - - - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
40. ms4a17a.9 ENSDARG00000094854 933 1.552 - 0.771 - - - 0.781 - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
41. bmper ENSDARG00000101980 668 1.549 - 0.818 - - - 0.731 - - - BMP binding endothelial regulator [Source:ZFIN;Acc:ZDB-GENE-030219-146]
42. MTMR4 1374 1.541 - 0.768 - - - - 0.773 - - myotubularin related protein 4, transcript variant X3
43. SLC29A1 SLC29A1 1152 1.54 - 0.828 - - - 0.712 - - -
44. nubp2 ENSDARG00000055653 803 1.536 - 0.786 - - - 0.750 - - - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
45. C24H11orf54 C24H11orf54 719 1.534 - 0.771 - - - 0.763 - - -
46. prune ENSDARG00000076246, ENSDARG00000115232 875 1.524 - 0.776 - - - 0.748 - - - prune exopolyphosphatase [Source:ZFIN;Acc:ZDB-GENE-100609-1]
47. cyb5a ENSDARG00000098589 9430 1.522 - 0.721 - - - - 0.801 - - cytochrome b5 type A (microsomal) [Source:ZFIN;Acc:ZDB-GENE-040426-2148]
48. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 1.518 - 0.743 - 0.775 - - - - - protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
49. btbd10b ENSDARG00000020252 7251 1.517 - - - 0.730 - - 0.787 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
50. cflara ENSDARG00000055966 464 1.501 - 0.744 - - - 0.757 - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
51. ctsz ENSDARG00000043081 1073 1.501 - 0.731 - 0.770 - - - - - cathepsin Z [Source:ZFIN;Acc:ZDB-GENE-041010-139]
52. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 1.501 - 0.759 - - - 0.742 - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
53. ck2a2a ck2a2a 1695 1.5 - 0.770 - - - 0.730 - - -
54. sirt2 ENSDARG00000011488 5389 1.491 - 0.789 - - - 0.702 - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
55. ccdc28a ENSDARG00000022983, ENSDARG00000091471 1449 1.49 - 0.772 - - - - 0.718 - - coiled-coil domain containing 28A [Source:ZFIN;Acc:ZDB-GENE-030131-5007]
56. fam58a 423 1.489 - - - 0.777 - - - 0.712 - family with sequence similarity 58, member A, transcript variant X1
57. ppie ENSDARG00000103234, ENSDARG00000111596 511 1.488 - - - 0.785 - 0.703 - - - peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
58. aim1a 2981 1.487 - 0.730 - - - - 0.757 - - crystallin beta-gamma domain containing 1a, transcript variant X1
59. ipmkb ENSDARG00000029291 625 1.483 - 0.712 - - - 0.771 - - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
60. phf3 ENSDARG00000034768 1372 1.482 - 0.730 - 0.752 - - - - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
61. egfl7 ENSDARG00000100657 776 1.473 - 0.712 - 0.761 - - - - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
62. ak2 ENSDARG00000005926 7598 1.472 0.738 - - - - 0.734 - - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
63. ugt5a5 807 1.472 - 0.748 - - - 0.724 - - - UDP glucuronosyltransferase 5 family, polypeptide A5
64. itgb4 ENSDARG00000028507 2568 1.472 - 0.732 - 0.740 - - - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
65. appl1 1019 1.465 - - - - - 0.711 0.754 - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
66. abt1 ENSDARG00000043666 345 1.464 - 0.722 - - - 0.742 - - - activator of basal transcription 1 [Source:ZFIN;Acc:ZDB-GENE-050522-127]
67. pex14 ENSDARG00000028322 1087 1.463 - - - - - 0.750 - 0.713 - peroxisomal biogenesis factor 14 [Source:ZFIN;Acc:ZDB-GENE-060130-169]
68. cfb ENSDARG00000055278, ENSDARG00000110358 1725 1.463 - 0.722 - - - 0.741 - - - complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
69. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 1.462 - 0.749 - - - - 0.713 - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
70. rnf34a ENSDARG00000038300 179 1.458 - 0.747 - - - 0.711 - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
71. tcn2l tcn2l 2428 1.454 0.734 0.720 - - - - - - -
72. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.453 - 0.741 - - - 0.712 - - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
73. CNDP1 CNDP1 6456 1.451 - 0.750 - - - 0.701 - - -
74. sfxn4 ENSDARG00000069832, ENSDARG00000115771 696 1.45 - - - 0.733 - 0.717 - - - sideroflexin 4 [Source:ZFIN;Acc:ZDB-GENE-050309-187]
75. rpia ENSDARG00000056640, ENSDARG00000110576 8288 1.45 - - - 0.725 - 0.725 - - - ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
76. gpatch4 ENSDARG00000091931 923 1.442 - 0.704 - 0.738 - - - - - G patch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041008-158]
77. C11H9orf89 C11H9orf89 477 1.433 - - - - - 0.728 - 0.705 -
78. taldo1 ENSDARG00000103369 3804 1.431 0.701 - - - - 0.730 - - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
79. SLC27A2 SLC27A2 436 1.429 - 0.717 - - - - - 0.712 -
80. c3a c3a 6690 0.934 - 0.934 - - - - - - -
81. ecscr ENSDARG00000087457 319 0.927 - - - 0.927 - - - - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:ZFIN;Acc:ZDB-GENE-050411-37]
82. rybpb ENSDARG00000053459 1464 0.924 - - - 0.924 - - - - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
83. ptpn4b ENSDARG00000000183 425 0.923 - - - 0.923 - - - - - protein tyrosine phosphatase, non-receptor type 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6259]
84. bdnf ENSDARG00000018817 193 0.92 - - - 0.920 - - - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
85. zgc:171775 ENSDARG00000058381, ENSDARG00000114470 5760 0.92 - 0.920 - - - - - - - zgc:171775 [Source:ZFIN;Acc:ZDB-GENE-030131-4309]
86. AL840631.3 AL840631.3 82 0.919 - - - 0.919 - - - - -
87. fam49bb ENSDARG00000045417 513 0.918 - - - 0.918 - - - - - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
88. STAC ENSDARG00000074004 83 0.914 - - - 0.914 - - - - - SH3 and cysteine rich domain [Source:ZFIN;Acc:ZDB-GENE-131121-459]
89. SLC5A6 SLC5A6 179 0.913 - - - 0.913 - - - - -
90. IL17RA_1 IL17RA_1 39 0.913 - - - 0.913 - - - - -
91. si:ch211-212k5.2 si:ch211-212k5.2 152 0.912 - - - 0.912 - - - - -
92. ccdc22 ENSDARG00000052379 2276 0.912 - 0.912 - - - - - - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
93. mecr ENSDARG00000032326 314 0.912 - - - 0.912 - - - - - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
94. si:dkey-151m22.8 ENSDARG00000095934 41 0.912 - - - 0.912 - - - - - si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
95. mfsd5 ENSDARG00000015997 570 0.912 - 0.912 - - - - - - - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
96. zdhhc9 ENSDARG00000060515 981 0.911 - 0.911 - - - - - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
97. ftr67 ENSDARG00000098820 611 0.911 - - - 0.911 - - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
98. ANKRD6 ANKRD6 73 0.911 - - - 0.911 - - - - -
99. dhrs13a.1 ENSDARG00000026322 336 0.911 - 0.911 - - - - - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-58]
100. olfml3a ENSDARG00000061852 139 0.909 - - - 0.909 - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]

There are 1276 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA