Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for clu

Gene Name Gene ID Reads Annotation
clu ENSDARG00000010434 498 clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]










Genes with expression patterns similar to clu

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. clu ENSDARG00000010434 498 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
2. nkx2.9 ENSDARG00000020332 357 3.959 0.748 0.761 - - - 0.729 0.886 0.835 - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
3. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 3.405 0.877 0.761 - - - 0.825 0.942 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
4. shha ENSDARG00000068567, ENSDARG00000111447 1497 3.294 0.702 0.906 - - - 0.913 0.773 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
5. ntn1b ENSDARG00000022531 248 3.22 0.741 0.732 - - - 0.935 0.812 - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
6. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 2.635 0.826 0.869 - - - - 0.940 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
7. MSMP ENSDARG00000105581 254 2.627 0.917 - - - - 0.882 0.828 - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
8. cyr61l2 ENSDARG00000099985 725 2.599 0.850 - - - - 0.872 0.877 - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
9. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 2.596 - 0.853 - - 0.989 - 0.754 - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
10. scg2a 800 2.543 - 0.800 - - - 0.833 0.910 - - secretogranin II (chromogranin C) a
11. ADAMTS3 ENSDARG00000060127 2839 2.495 0.814 0.838 - - - - 0.843 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
12. nkx2.2a ENSDARG00000053298 747 2.462 0.833 0.734 - - - - 0.895 - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
13. cdkl1 ENSDARG00000017329 3345 2.461 0.851 - - - - 0.704 0.906 - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
14. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 2.454 0.791 0.779 - - - 0.884 - - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
15. crb1 ENSDARG00000100506, ENSDARG00000110621 373 2.278 - 0.706 - - - 0.709 0.863 - - crumbs family member 1, photoreceptor morphogenesis associated [Source:ZFIN;Acc:ZDB-GENE-050208-382]
16. alpk3a ENSDARG00000078989 1992 2.264 - 0.766 - - - 0.764 - 0.734 - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
17. lgi1a ENSDARG00000020493 1218 1.871 - - - - 0.993 - 0.878 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
18. zic5 ENSDARG00000016022 1034 1.825 - - - - 0.986 - 0.839 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
19. nkx6.1 ENSDARG00000022569 3779 1.814 - 0.922 - - - - 0.892 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
20. eng1b eng1b 2544 1.79 - 0.807 - - 0.983 - - - -
21. epyc ENSDARG00000056950 7783 1.78 - 0.911 - - - 0.869 - - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
22. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.779 - - - - 0.967 - 0.812 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
23. rfc1 ENSDARG00000054799 1416 1.779 - 0.796 - - 0.983 - - - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
24. sin3b ENSDARG00000062472 2025 1.774 - 0.783 - - 0.991 - - - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
25. CU658147.1 CU658147.1 69 1.772 - - - - - 0.905 0.867 - -
26. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.767 - - - - 0.968 - 0.799 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
27. shhb ENSDARG00000038867 338 1.763 - - - - - 0.869 0.894 - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
28. kera ENSDARG00000056938 2434 1.755 - 0.785 - - 0.970 - - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
29. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1.74 - - - - 0.995 - - 0.745 - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
30. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1.738 - - - - - 0.824 0.914 - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
31. srpk1b ENSDARG00000031560 2079 1.734 - 0.787 - - 0.947 - - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
32. sulf2 sulf2 1286 1.73 - - - - 0.982 - - 0.748 -
33. si:ch73-389b16.2 ENSDARG00000103802 340 1.73 0.927 - - - - - 0.803 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
34. UNC13A UNC13A 36 1.73 - - - - - 0.816 0.914 - -
35. mmp23bb ENSDARG00000009825 133 1.73 0.799 - - - - 0.931 - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
36. ntla ntla 926 1.728 - 0.938 - - - 0.790 - - -
37. matn3b ENSDARG00000069265 856 1.727 - 0.857 - - - 0.870 - - - matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
38. mnx2b ENSDARG00000030350 484 1.725 - 0.840 - - - - 0.885 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
39. TMEM100_1 TMEM100_1 44 1.713 - - - - - 0.857 0.856 - -
40. BX469915.2 BX469915.2 48 1.713 0.799 - - - - - 0.914 - -
41. hvcn1 ENSDARG00000040338 571 1.711 - - 0.720 - 0.991 - - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
42. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.702 - 0.726 - - 0.976 - - - - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
43. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.697 - 0.815 - - - - 0.882 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
44. ptprnb ENSDARG00000077047 2743 1.694 - 0.838 - - - - 0.856 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
45. CDK5R1 CDK5R1 562 1.691 - 0.790 - - - - 0.901 - -
46. si:ch73-265d7.2 ENSDARG00000116713 2142 1.691 0.810 - - - - - 0.881 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
47. plod1a ENSDARG00000059746 3364 1.691 - - - - 0.963 0.728 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
48. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.685 - - - - - 0.816 0.869 - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
49. C24H17orf96 C24H17orf96 1538 1.683 - 0.721 - - 0.962 - - - -
50. CABZ01044297.1 CABZ01044297.1 2015 1.68 - 0.868 - - - 0.812 - - -
51. MAP3K2 ENSDARG00000062884 34 1.677 0.927 - - - - - 0.750 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
52. spon1a ENSDARG00000010029 355 1.671 - - - - - 0.850 0.821 - - spondin 1a [Source:ZFIN;Acc:ZDB-GENE-000427-9]
53. marcksa ENSDARG00000004049 2518 1.67 - - - - 0.930 - 0.740 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
54. tgfb3 ENSDARG00000019367 2327 1.668 0.802 - - - - 0.866 - - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
55. Metazoa_SRP_30 Metazoa_SRP_30 10 1.667 0.927 - - - - 0.740 - - -
56. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.665 - 0.874 - - - - 0.791 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
57. pbx3a ENSDARG00000089262 97 1.663 0.728 - - - - - 0.935 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
58. col9a3 ENSDARG00000037845 6564 1.658 - 0.916 - - - 0.742 - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
59. loxl5b ENSDARG00000076904 468 1.658 - 0.830 - - - 0.828 - - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
60. kif19 ENSDARG00000053026 124 1.658 0.795 - - - - - 0.863 - - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
61. sox2 ENSDARG00000070913 2763 1.656 - 0.851 - - - - 0.805 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
62. LPL ENSDARG00000087697 18 1.655 0.799 - - - - 0.856 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
63. plod2 ENSDARG00000011821 1656 1.654 - 0.752 - - - 0.902 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
64. tmtc2 tmtc2 798 1.644 - - - - - - 0.899 0.745 -
65. wu:fc51f04 wu:fc51f04 7074 1.643 - 0.782 - - 0.861 - - - -
66. nrarpb ENSDARG00000018958 6225 1.643 - - - - 0.914 - 0.729 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
67. wnt4a ENSDARG00000071208 1157 1.639 - - - - - 0.702 0.937 - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
68. mnx2a ENSDARG00000042106 939 1.636 - 0.750 - - - - 0.886 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
69. CU928222.1 ENSDARG00000097436 1662 1.631 - 0.866 - - - - 0.765 - -
70. slc1a3a ENSDARG00000104431 9888 1.631 - 0.804 - - - - 0.827 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
71. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 1.63 0.927 - - - - - - 0.703 - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
72. her13 ENSDARG00000007097 2000 1.63 - 0.817 - - - - 0.813 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
73. GJC1 GJC1 44 1.623 - - - - - - 0.914 - 0.709
74. her15.2 her15.2 1701 1.621 - 0.800 - - - - 0.821 - -
75. SSX2IP SSX2IP 316 1.619 - 0.760 - - - - 0.859 - -
76. CABZ01028287.1 CABZ01028287.1 626 1.618 - 0.800 - - - - 0.818 - -
77. zgc:113531 ENSDARG00000038794 2063 1.615 0.703 - - - - - 0.912 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
78. PLXDC2 ENSDARG00000059950 220 1.613 - 0.771 - - - 0.842 - - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
79. BX470254.1 ENSDARG00000097402 1389 1.612 - 0.846 - - - 0.766 - - -
80. hes2.2 ENSDARG00000068168 197 1.612 0.872 - - - - 0.740 - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
81. rsph9 ENSDARG00000017355 144 1.607 - 0.732 - - - 0.875 - - - radial spoke head 9 homolog [Source:ZFIN;Acc:ZDB-GENE-051120-129]
82. olig2 ENSDARG00000040946 1405 1.607 - 0.768 - - - - 0.839 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
83. si:ch211-117c9.5 ENSDARG00000071235 154 1.602 - - - - - - 0.856 0.746 - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
84. nrn1a ENSDARG00000071860 1311 1.597 - 0.828 - - - - 0.769 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
85. cldn7a ENSDARG00000036376, ENSDARG00000111721, ENSDARG00000115826 56 1.595 - - - - - - 0.720 0.875 - claudin 7a [Source:ZFIN;Acc:ZDB-GENE-040718-29]
86. TC2N ENSDARG00000095067 146 1.592 0.818 - - - - 0.774 - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
87. epha3l epha3l 1441 1.591 - 0.838 - - - - 0.753 - -
88. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.589 0.754 - - - - - 0.835 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
89. zic4 ENSDARG00000031307 1228 1.588 - 0.845 - - - - 0.743 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
90. C11H1orf158 C11H1orf158 133 1.586 0.744 - - - - - 0.842 - -
91. col27a1a 1747 1.584 - 0.763 - - - 0.821 - - - collagen, type XXVII, alpha 1a
92. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 1.58 - 0.809 - - - - 0.771 - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
93. traf1 ENSDARG00000069482 50 1.579 0.799 - - - - - - 0.780 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
94. loxl1 ENSDARG00000054451 2485 1.578 - 0.755 - - - 0.823 - - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
95. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1.574 - - - - - 0.824 0.750 - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
96. BX005421.3 ENSDARG00000114309 7 1.574 - - - - - 0.824 0.750 - -
97. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1.574 - - - - - 0.824 0.750 - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
98. zgc:195633_1 142 1.574 - - - - - 0.824 0.750 - - zgc:195633
99. zeb1a ENSDARG00000016788 48 1.574 - - - - - 0.824 0.750 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
100. zgc:174688 zgc:174688 170 1.573 0.799 - - - - 0.774 - - -

There are 1889 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA